MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-281I13
Chromosome	1 (Build37)
Map Location	169,441,893 - 169,625,600
singlet/doublet	doublet
Overlap gene	Rxrg, Lmx1a
Upstream gene	EG226604, 4831428F09Rik, LOC240895, LOC622102, C030014K22Rik, Uck2, LOC100039844, Tmco1, Aldh9a1, Mgst3, Lrrc52
Downstream gene	LOC100039879, Pbx1
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG226604 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226604 MGI:3643320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 9 Proteins

name	4831428F09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240894 MGI:3606068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC240895 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:240895
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC622102 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 487 ESTs, 13 Proteins pseudo : _no_value

name	C030014K22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226610 MGI:2443050
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uck2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80914 MGI:1931744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039844 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039844
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Tmco1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68944 MGI:1921173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aldh9a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56752 MGI:1861622
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgst3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66447 MGI:1913697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc52 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240899 MGI:1924118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rxrg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20183 MGI:98216
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lmx1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110648 MGI:1888519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039879 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039879
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pbx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18514 MGI:97495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG226604 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94364498 GeneID:226604 MGI:3643320
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 9 Proteins product : predicted gene, EG226604 transcript_id : XM_136368.7

name	4831428F09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351706 GeneID:240894 MGI:3606068
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4831428F09 gene transcript_id : NM_172844.2

name	C030014K22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63003924 GeneID:226610 MGI:2443050
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C030014K22 gene transcript_id : NM_175461.3

name	Uck2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370725 GeneID:80914 MGI:1931744
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uridine-cytidine kinase 2 transcript_id : NM_030724.2

name	LOC100039844 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149245294 GeneID:100039844
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039844 transcript_id : XM_001473654.1

name	Tmco1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87116676 GeneID:68944 MGI:1921173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and coiled-coil domains 1 transcript_id : NM_001039483.1

name	Aldh9a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115334670 GeneID:56752 MGI:1861622
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase 9, subfamily A1 transcript_id : NM_019993.3

name	Mgst3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385009 GeneID:66447 MGI:1913697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microsomal glutathione S-transferase 3 transcript_id : NM_025569.1

name	Lrrc52 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376921 GeneID:240899 MGI:1924118
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 52 transcript_id : NM_001013382.2

name	Rxrg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476335 GeneID:20183 MGI:98216
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoid X receptor gamma transcript_id : NM_009107.2

name	Lmx1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227240 GeneID:110648 MGI:1888519
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox transcription factor 1 alpha transcript_id : NM_033652.3

name	Pbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031939 GeneID:18514 MGI:97495
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pre B-cell leukemia transcription factor 1 transcript_id : NM_008783.2

name	Pbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032042 GeneID:18514 MGI:97495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pre B-cell leukemia transcription factor 1 transcript_id : NM_183355.2

name	EG226604 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82883108 GeneID:226604 MGI:3643320
definition	codon_start : 1 product : flavin-containing monooxygenase 12 protein_id : XP_136368.5

name	4831428F09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370272 CCDS:CCDS15453.1 GeneID:240894 MGI:3606068
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0031227 - intrinsic to endoplasmic reticulum membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0004499 - dimethylaniline monooxygenase (N-oxide-forming) activity [Evidence IEA]; GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC240894 protein_id : NP_766432.1

name	C030014K22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63003925 GeneID:226610 MGI:2443050
definition	codon_start : 1 product : hypothetical protein LOC226610 protein_id : NP_780670.2

name	Uck2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507680 CCDS:CCDS15455.1 GeneID:80914 MGI:1931744
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004849 - uridine kinase activity [Evidence IEA] GO_process : GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 function : phosphorylates uridine and cytidine to uridine monophosphate and cytidine monophosphate, respectively note : uridine monophosphate kinase 2; cytidine monophosphokinase 2 product : uridine-cytidine kinase 2 protein_id : NP_109649.1

name	LOC100039844 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149245295 GeneID:100039844
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473704.1

name	Tmco1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87116677 CCDS:CCDS15456.1 GeneID:68944 MGI:1921173
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : putative membrane protein protein_id : NP_001034572.1

name	Aldh9a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115334671 GeneID:56752 MGI:1861622
definition	GO_component : GO:0005829 - cytosol [Evidence IDA] GO_function : GO:0047105 - 4-trimethylammoniobutyraldehyde dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IDA] GO_process : GO:0009437 - carnitine metabolism [Evidence IDA] codon_start : 1 note : aldehyde dehydrogenase 9A product : aldehyde dehydrogenase 9, subfamily A1 protein_id : NP_064377.2

name	Mgst3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385010 CCDS:CCDS15457.1 GeneID:66447 MGI:1913697
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : microsomal glutathione S-transferase 3 protein_id : NP_079845.1

name	Lrrc52 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61656190 CCDS:CCDS15458.1 GeneID:240899 MGI:1924118
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 52 protein_id : NP_001013400.1

name	Rxrg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677829 CCDS:CCDS15459.1 GeneID:20183 MGI:98216
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : retinoid X receptor gamma protein_id : NP_033133.1

name	Lmx1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17298670 CCDS:CCDS15460.1 GeneID:110648 MGI:1888519
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0045665 - negative regulation of neuron differentiation [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : shaker short-tail product : LIM homeobox transcription factor 1 alpha protein_id : NP_387501.1

name	Pbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34365779 CCDS:CCDS15461.1 GeneID:18514 MGI:97495
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence TAS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0030325 - adrenal gland development [Evidence IMP]; GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA]; GO:0048536 - spleen development [Evidence IMP] [Evidence IGI]; GO:0006350 - transcription [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IDA]; GO:0001655 - urogenital system development [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant a product : pre B-cell leukemia transcription factor 1 isoform a protein_id : NP_899198.1

name	Pbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7110681 CCDS:CCDS15462.1 GeneID:18514 MGI:97495
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence TAS]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0030325 - adrenal gland development [Evidence IMP]; GO:0006700 - C21-steroid hormone biosynthesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA]; GO:0048536 - spleen development [Evidence IMP] [Evidence IGI]; GO:0006350 - transcription [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IDA]; GO:0001655 - urogenital system development [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant b product : pre B-cell leukemia transcription factor 1 isoform b protein_id : NP_032809.1

name	LOC240895 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:240895
definition	number : 1 pseudo : _no_value

name	LOC240895 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:240895
definition	number : 2 pseudo : _no_value

name	LOC240895 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:240895
definition	number : 3 pseudo : _no_value

name	LOC100039879 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039879
definition	number : 3 pseudo : _no_value

name	LOC100039879 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039879
definition	number : 2 pseudo : _no_value

name	LOC100039879 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039879
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:125080
definition	standard_name : MHAa21c1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128915
definition	standard_name : D1Mit57.1

name	(CDS detail)
type	STS
link
xref	UniSTS:116691
definition	standard_name : D1Mit57

name	(CDS detail)
type	STS
link
xref	UniSTS:124377
definition	standard_name : 40.MMHAP67FLF4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128710
definition	standard_name : D1Mit351

name	(CDS detail)
type	STS
link
xref	UniSTS:178500
definition	standard_name : AU018180

name	(CDS detail)
type	STS
link
xref	UniSTS:158877
definition	standard_name : AI481316

name	(CDS detail)
type	STS
link
xref	UniSTS:234260
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162488
definition	standard_name : RH125730

name	(CDS detail)
type	STS
link
xref	UniSTS:210538
definition	standard_name : RH136556

name	(CDS detail)
type	STS
link
xref	UniSTS:124524
definition	standard_name : 44.MMHAP10FG5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128762
definition	standard_name : D1Mit400

name	(CDS detail)
type	STS
link
xref	UniSTS:128482
definition	standard_name : D1Mit145

name	(CDS detail)
type	STS
link
xref	UniSTS:143025
definition	standard_name : AA109065

name	(CDS detail)
type	STS
link
xref	UniSTS:207245
definition	standard_name : AU022572

name	(CDS detail)
type	STS
link
xref	UniSTS:161099
definition	standard_name : RH124277

name	(CDS detail)
type	STS
link
xref	UniSTS:116693
definition	standard_name : D1Mit109

name	(CDS detail)
type	STS
link
xref	UniSTS:108977
definition	standard_name : G49221

name	(CDS detail)
type	STS
link
xref	UniSTS:272945
definition	standard_name : PMC314362P1

name	(CDS detail)
type	STS
link
xref	UniSTS:108984
definition	standard_name : G49228

name	(CDS detail)
type	STS
link
xref	UniSTS:108993
definition	standard_name : G49237

name	(CDS detail)
type	STS
link
xref	UniSTS:18182
definition	standard_name : WI-15938

name	(CDS detail)
type	STS
link
xref	UniSTS:125140
definition	standard_name : MHAa32d3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:108976
definition	standard_name : G49220

name	(CDS detail)
type	STS
link
xref	UniSTS:108979
definition	standard_name : G49223

name	(CDS detail)
type	STS
link
xref	UniSTS:116694
definition	standard_name : D1Mit110

name	(CDS detail)
type	STS
link
xref	UniSTS:108992
definition	standard_name : G49236

name	(CDS detail)
type	STS
link
xref	UniSTS:108985
definition	standard_name : G49229

name	(CDS detail)
type	STS
link
xref	UniSTS:234262
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:108980
definition	standard_name : G49224

name	(CDS detail)
type	STS
link
xref	UniSTS:108995
definition	standard_name : G49239

name	(CDS detail)
type	STS
link
xref	UniSTS:108996
definition	standard_name : G49240

name	(CDS detail)
type	STS
link
xref	UniSTS:108982
definition	standard_name : G49226

name	(CDS detail)
type	STS
link
xref	UniSTS:116695
definition	standard_name : D1Mit370

name	(CDS detail)
type	STS
link
xref	UniSTS:108981
definition	standard_name : G49225

name	(CDS detail)
type	STS
link
xref	UniSTS:158878
definition	standard_name : MHAa52d2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:108983
definition	standard_name : G49227

name	(CDS detail)
type	STS
link
xref	UniSTS:178501
definition	standard_name : AI848790

name	(CDS detail)
type	STS
link
xref	UniSTS:234263
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:207244
definition	standard_name : AU015730

name	(CDS detail)
type	STS
link
xref	UniSTS:93438
definition	standard_name : AL033591

name	(CDS detail)
type	STS
link
xref	UniSTS:116696
definition	standard_name : D1Mit15

name	(CDS detail)
type	STS
link
xref	UniSTS:122993
definition	standard_name : 09.MMHAP76FLC3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:165118
definition	standard_name : AI593012

name	(CDS detail)
type	STS
link
xref	UniSTS:207246
definition	standard_name : AU022138

name	LOC622102 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149245341 GeneID:622102
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 487 ESTs, 13 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_032092.1

clone name	MSMg01-545N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-067J08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-438I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518G13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-504P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-273P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172L06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487L01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-343K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058J11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-281I13.b	B6Ng01-281I13.g
ACC	GA080986	GA080987
length	1,077	908
definition	B6Ng01-281I13.b	B6Ng01-281I13.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(169,441,893 - 169,442,961)	(169,624,696 - 169,625,600)
sequence	gaattcacggttctgcctgttaacaatccagcagccttattaggtggcgt ccgctggttcctgtgcttctctcacaggtcactgttgatccctgagtctg cttttagtggaggcgctggggattgaacccagggcttcctaaatgccagg taagccacagttcagcctctccagcctgaaaaagctctaataaatagtga tgaaattaaacgggtggcttcgtagaggcccaggcaaagcatcggtagag aaaaaggaaataaagtagattctcatctggatagctgagtgaagatactg agttctttcagtagttcagccacttggtcctcaggggtagatggagagtg tgtgctccatcttgtcgattgccacactggatctcaagcctttagctcta cctccgtctctagagtcaggcaaattattcagcctagtttgcatcttatt tcctttcctacaaacaaggaatgtttataaatataagaattggacctagt ccatggggctttctttttttctcctgatccagtgtgtacatggtgtctct ccttgggagataatgggttggtggcataattagggcacatcaggtagcca tgaccttccatgactccttcagatgcagcttcctctgtcagcctgtgtga atctgtgagcaggagcagtgaatctgaggacagcctaccacacagcacat tttcacctctaatcaaatggagaaagccatggtggttttgaaaattgaaa taactttttttttctccattttcacacatatctctagtttccaagaggag atatcaggcttctcaccaaacctgaaattcacagagactgcagaaaacat tttttaaatatttttattaggtattttcctcatttacatttccaatgcta tcccaaaagtccccatacccccccccacttcccactttttggccctggcg ttcccctgtactggggcataataaagtttgccaggtccaatgggctctct ttcagttgatggcccgactagccatcttttggattacatatgcagctagg aagtcaggagctccccggatactggtt	gaattctgtctttctaagcatcctgtactggagtggttaccctgacaatt tcatacacagagcaagtgattctggttactgtcaccccctaccctcccca gtctcctgctcctatttctaccccacctccaataaatcccattccattta agggaaggcctgacctgactccagggatatgcaggtaatgattgaaatac aaatctagaccttccaatgatccagaaatgcacacacatggcagaaataa atgtgataacctctgctgctaaaactgtgctcatggcagtcaccagagag tgcaatgcattcattcatttctttatgtagaaacagcacttacactttac agatttgagggatcaaagtactgtctgatcccttttctatcaagtgccta taatgaaccaccatggctcttagcatctaacacacatcttattttccctc tccctttaccttgtctgggaccttagtgtggaggaaacacatccagggag aggggtttccattgcagtaagaggggaagcaatttctgtgagtttcatga ctattgcccccaagttgagctgtaccctccaggattaacatgtggccatt ccagatagcttctagcagatacctagtcctgtgtaagtggagaaaccttt tcaggaagcccttgctagtctgggtaaaatagatgggaaacgtgccaggc tagaagccgcctgccatcgagctccaagaattttccaatgattttcctcg tcacaaccagggttttacgtgtagaaagctccataaaagcctgttgaata aaggaatttttcctgagcccaacttaaagaaagaaagaaagaaagaaaga aagaaagaaaggaaggaaggaaggaaggaaaggaaggaagggtagagaga gagagaga
quality values	Open. Hide. 52 36 18 23 58 32 27 39 58 62 62 62 62 47 47 62 62 62 62 62 47 62 62 43 24 62 62 62 47 37 35 51 42 38 46 56 56 45 46 56 59 59 59 59 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 62 59 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 54 62 54 62 62 62 62 62 62 54 47 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 41 56 62 62 62 62 62 47 62 54 62 62 62 62 62 62 62 54 62 62 52 62 62 62 54 62 62 62 42 47 35 43 39 38 62 62 62 52 62 62 62 48 62 47 43 54 54 54 58 52 58 58 54 58 58 54 54 52 45 54 54 58 49 58 54 58 52 58 36 37 54 58 45 39 58 54 54 54 48 33 54 58 58 38 54 54 58 54 54 37 31 29 45 22 44 30 25 13 16 28 17 52 54 52 58 54 54 52 54 54 32 54 58 52 58 42 58 54 54 58 34 39 46 53 54 51 49 58 37 41 50 35 58 58 37 53 53 53 40 47 58 30 41 50 51 50 46 27 58 51 50 32 46 41 48 50 42 25 52 52 41 26 47 50 49 40 39 49 50 50 51 51 48 36 32 51 36 52 39 35 22 58 40 34 33 58 50 50 54 46 32 32 33 54 30 18 25 37 31 42 54 51 38 58 54 13 58 49 49 39 58 32 51 36 23 47 50 35 51 40 35 30 32 50 39 52 50 50 40 44 58 51 49 41 41 21 39 24 28 51 52 51 35 35 39 41 40 24 42 30 42 52 53 42 37 25 29 16 54 42 39 24 18 32 39 32 9 33 25 29 37 29 37 32 42 6 10 10 16 15 23 35 45 31 37 29 22 16 37 6 12 34 36 32 52 47 15 15 21 26 35 33 29 45 46 23 20 30 33 52 32 17 5 11 40 32 47 31 31 38 40 37 51 45 35 31 37 41 36 36 21 45 46 40 27 31 31 18 42 29 51 26 31 30 46 41 30 29 18 10 30 21 31 42 43 18 21 21 32 46 13 12 41 27 30 31 43 27 15 30 34 43 42 34 26 46 46 29 35 35 30 41 29 32 15 32 33 43 39 32 30 31 31 31 31 39 20 24 14 10 21 39 22 27 10 12 33 39 44 11 41 21 14 27 22 9 6 31 16 11 9 36 32 44 44 30 13 31 7 13 31 8 16 35 33 35 11 19 9 6 25 11 6 31 25 28 8 24 8 8 10 10 33 9 9 9 24 11 18 14 17 32 36 22 23 4 4 8 22 26 23 16 5 4 5 4 6 21 33 21 18 17 9 30 14 10 37 9 8 6 10 7 14 22 16 22 15 20 34 24 7 10 6 7 6 6 11 7 18 16 28 27 29 27 13 16 15 11 9 6 6 20 20 19 15 11 8 8 25 11 19 28 7 29 7 3 3 5 6 6 10 27 27 11 21 8 6	Open. Hide. 62 49 42 47 62 62 62 62 62 62 45 45 28 32 20 22 25 25 28 29 45 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 59 59 59 59 62 59 62 62 62 62 59 59 62 62 62 56 59 59 48 42 54 59 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 54 48 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 37 28 32 62 56 56 56 46 46 56 62 56 62 47 62 62 62 54 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 52 62 62 62 62 47 43 62 62 62 54 43 47 45 62 62 62 52 62 42 54 47 42 62 62 62 52 62 62 62 52 62 58 58 52 58 58 58 58 58 52 58 58 41 42 58 58 54 58 54 52 58 58 54 58 58 54 52 52 58 58 58 43 52 54 54 58 58 58 58 58 58 54 50 58 54 54 58 58 58 52 58 58 58 52 42 41 41 52 52 54 38 54 25 43 46 27 49 54 54 52 54 58 58 54 58 45 48 54 50 58 46 41 45 49 47 45 50 49 51 50 54 42 53 46 51 37 51 51 39 45 32 50 41 51 49 52 52 47 48 51 53 58 49 58 39 58 58 37 50 58 48 51 37 51 58 24 24 50 49 58 49 36 37 36 19 29 28 51 31 44 54 51 54 39 41 45 46 42 42 40 41 35 51 58 51 35 26 49 58 52 49 36 33 53 42 51 58 29 51 58 49 29 28 31 51 37 49 50 32 50 37 52 53 39 54 51 26 40 39 20 16 27 23 51 50 39 22 41 47 24 44 29 36 44 37 54 23 50 37 54 27 24 54 54 35 42 37 30 32 40 39 19 6 54 54 33 40 42 45 45 37 37 40 34 37 33 23 29 51 40 53 53 34 33 54 54 52 30 37 40 53 45 32 32 35 22 52 16 11 41 24 29 53 37 34 32 47 34 29 12 18 28 31 53 26 35 25 29 19 31 32 46 32 40 39 31 37 27 51 51 51 28 16 28 30 30 38 11 23 27 25 18 31 23 26 25 30 45 37 30 32 32 31 29 24 29 20 22 43 31 37 30 42 31 28 21 26 24 21 17 24 25 25 13 25 32 31 31 41 40 31 24 30 24 22 14 41 25 18 18 29 29 46 9 46 19 15 11 41 13 39 20 25 28 26 18 14 22 22 18 8 31 25 6 25 14 46 7 34 13 28 7 18 5 25 11 29 5 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_169441893_169442961
seq2: B6Ng01-281I13.b_48_1124

seq1  GAATTCACGGTTCTGCCTGTTAACAATCCAGCAGCCTTATTAGGTGGCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGGTTCTGCCTGTTAACAATCCAGCAGCCTTATTAGGTGGCGT  50

seq1  CCGCTGGTTCCTGTGCTTCTCTCACAGGTCACTGTTGATCCCTGAGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGGTTCCTGTGCTTCTCTCACAGGTCACTGTTGATCCCTGAGTCTG  100

seq1  CTTTTAGTGGAGGCGCTGGGGATTGAACCCAGGGCTTCCTAAATGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTGGAGGCGCTGGGGATTGAACCCAGGGCTTCCTAAATGCCAGG  150

seq1  TAAGCCACAGTTCAGCCTCTCCAGCCTGAAAAAGCTCTAATAAATAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACAGTTCAGCCTCTCCAGCCTGAAAAAGCTCTAATAAATAGTGA  200

seq1  TGAAATTAAACGGGTGGCTTCGTAGAGGCCCAGGCAAAGCATCGGTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAACGGGTGGCTTCGTAGAGGCCCAGGCAAAGCATCGGTAGAG  250

seq1  AAAAAGGAAATAAAGTAGATTCTCATCTGGATAGCTGAGTGAAGATACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAATAAAGTAGATTCTCATCTGGATAGCTGAGTGAAGATACTG  300

seq1  AGTTCTTTCAGTAGTTCAGCCACTTGGTCCTCAGGGGTAGATGGAGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCAGTAGTTCAGCCACTTGGTCCTCAGGGGTAGATGGAGAGTG  350

seq1  TGTGCTCCATCTTGTCGATTGCCACACTGGATCTCAAGCCTTTAGCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCCATCTTGTCGATTGCCACACTGGATCTCAAGCCTTTAGCTCTA  400

seq1  CCTCCGTCTCTAGAGTCAGGCAAATTATTCAGCCTAGTTTGCATCTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCGTCTCTAGAGTCAGGCAAATTATTCAGCCTAGTTTGCATCTTATT  450

seq1  TCCTTTCCTACAAACAAGGAATGTTTATAAATATAAGAATTGGACCTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTACAAACAAGGAATGTTTATAAATATAAGAATTGGACCTAGT  500

seq1  CCATGGGGCTTTCTTTTTTTCTCCTGATCCAGTGTGTACATGGTGTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGGCTTTCTTTTTTTCTCCTGATCCAGTGTGTACATGGTGTCTCT  550

seq1  CCTTGGGAGATAATGGGTTGGTGGCATAATTAGGGCACATCAGGTAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGAGATAATGGGTTGGTGGCATAATTAGGGCACATCAGGTAGCCA  600

seq1  TGACCTTCCATGACTCCTTCAGATGCAGCTTCCTCTGTCAGCCTGTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTCCATGACTCCTTCAGATGCAGCTTCCTCTGTCAGCCTGTGTGA  650

seq1  ATCTGTGAGCAGGAGCAGTGAATCTGAGGACAGCCTACCACACAGCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGAGCAGGAGCAGTGAATCTGAGGACAGCCTACCACACAGCACAT  700

seq1  TTTCACCTCTAATCAAATGGAG-AAGCCATGGTGGTTTTGAAAATTGAAA  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTCACCTCTAATCAAATGGAGAAAGCCATGGTGGTTTTGAAAATTGAAA  750

seq1  TAAC-TTTTTTTTCTCCATTTTCACACATATCTCTAGTTTCCAAGAGGAG  798
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTTTTTTCTCCATTTTCACACATATCTCTAGTTTCCAAGAGGAG  800

seq1  ATATCAGGGCTTCTCACC-AACCTGAAATTCACAGAGACTGCAGAAAACA  847
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  ATATCA-GGCTTCTCACCAAACCTGAAATTCACAGAGACTGCAGAAAACA  849

seq1  TTTTTTAAATATTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATATTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCT  899

seq1  ATCCCAAAAGTCCCCCATACCCCCCCCCAC-TCCCACTTTTTGGCCCTGG  946
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  ATCCCAAAAGT-CCCCATACCCCCCCCCACTTCCCACTTTTTGGCCCTGG  948

seq1  CGTTCCCCTGTACTGGGGCAT-ATAAAGTTTG-CAAGTCCAATGGGCCTC  994
      ||||||||||||||||||||| |||||||||| || |||||||||| |||
seq2  CGTTCCCCTGTACTGGGGCATAATAAAGTTTGCCAGGTCCAATGGG-CTC  997

seq1  TCTTTCCAGTGATGG-CCGACTAGGCCATCTTTTG--ATACATATGCAGC  1041
      ||||||   |||||| ||||||| |||||||||||   ||||||||||||
seq2  TCTTTCAGTTGATGGCCCGACTA-GCCATCTTTTGGATTACATATGCAGC  1046

seq1  TAG--AGTCAAGAGCT-CCCGGGTACTGGTT  1069
      |||  ||||| ||||| ||||| ||||||||
seq2  TAGGAAGTCAGGAGCTCCCCGGATACTGGTT  1077

seq1: chr1_169624696_169625600
seq2: B6Ng01-281I13.g_68_975 (reverse)

seq1  TCTCTCTCTCTCTCT-CCCTTCCTTCC-TTCCTTCCTTCCTTCCTTCCTT  48
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTACCCTTCCTTCCTTTCCTTCCTTCCTTCCTTCCTT  50

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAAGTTGGGCTCAGGAAA  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAAGTTGGGCTCAGGAAA  100

seq1  AATTCCTTTATTCAACAGGCTTTTATGGAGC-TTCTACACGTAAAACCCT  147
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATTCCTTTATTCAACAGGCTTTTATGGAGCTTTCTACACGTAAAACCCT  150

seq1  GGTTGTGACGAGGAAAATCATTGGAAAATTCTTGGAGCTCGATGGCAGGC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGACGAGGAAAATCATTGGAAAATTCTTGGAGCTCGATGGCAGGC  200

seq1  GGCTTCTAGCCTGGCACGTTTCCCATCTATTTTACCCAGACTAGCAAGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTAGCCTGGCACGTTTCCCATCTATTTTACCCAGACTAGCAAGGG  250

seq1  CTTCCTGAAAAGGTTTCTCCACTTACACAGGACTAGGTATCTGCTAGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAAAAGGTTTCTCCACTTACACAGGACTAGGTATCTGCTAGAAG  300

seq1  CTATCTGGAATGGCCACATGTTAATCCTGGAGGGTACAGCTCAACTTGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGGAATGGCCACATGTTAATCCTGGAGGGTACAGCTCAACTTGGG  350

seq1  GGCAATAGTCATGAAACTCACAGAAATTGCTTCCCCTCTTACTGCAATGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAGTCATGAAACTCACAGAAATTGCTTCCCCTCTTACTGCAATGG  400

seq1  AAACCCCTCTCCCTGGATGTGTTTCCTCCACACTAAGGTCCCAGACAAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCTCTCCCTGGATGTGTTTCCTCCACACTAAGGTCCCAGACAAGG  450

seq1  TAAAGGGAGAGGGAAAATAAGATGTGTGTTAGATGCTAAGAGCCATGGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGAGAGGGAAAATAAGATGTGTGTTAGATGCTAAGAGCCATGGTG  500

seq1  GTTCATTATAGGCACTTGATAGAAAAGGGATCAGACAGTACTTTGATCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTATAGGCACTTGATAGAAAAGGGATCAGACAGTACTTTGATCCC  550

seq1  TCAAATCTGTAAAGTGTAAGTGCTGTTTCTACATAAAGAAATGAATGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGTAAAGTGTAAGTGCTGTTTCTACATAAAGAAATGAATGAAT  600

seq1  GCATTGCACTCTCTGGTGACTGCCATGAGCACAGTTTTAGCAGCAGAGGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCACTCTCTGGTGACTGCCATGAGCACAGTTTTAGCAGCAGAGGT  650

seq1  TATCACATTTATTTCTGCCATGTGTGTGCATTTCTGGATCATTGGAAGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATTTATTTCTGCCATGTGTGTGCATTTCTGGATCATTGGAAGGT  700

seq1  CTAGATTTGTATTTCAATCATTACCTGCATATCCCTGGAGTCAGGTCAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTGTATTTCAATCATTACCTGCATATCCCTGGAGTCAGGTCAGG  750

seq1  CCTTCCCTTAAATGGAATGGGATTTATTGGAGGTGGGGTAGAAATAGGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTTAAATGGAATGGGATTTATTGGAGGTGGGGTAGAAATAGGAG  800

seq1  CAGGAGACTGGGGAGGGTAGGGGGTGACAGTAACCAGAATCACTTGCTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACTGGGGAGGGTAGGGGGTGACAGTAACCAGAATCACTTGCTCT  850

seq1  GTGTATGAAATTGTCAGGGTAACCACTCCAGTACAGGATGCTTAGAAAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGAAATTGTCAGGGTAACCACTCCAGTACAGGATGCTTAGAAAGA  900

seq1  CAGAATTC  905
      ||||||||
seq2  CAGAATTC  908

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information