BAC Information

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BAC

Clone NameB6Ng01-282B17
Chromosome1 (Build37)
Map Location 177,164,091 - 177,164,567
singlet/doubletsinglet
Overlap geneRgs7
Upstream geneSpna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2
Downstream geneFh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282B17.bB6Ng01-282B17.g
ACCGA081412GA081413
length9861,187
definitionB6Ng01-282B17.b B6Ng01-282B17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcttggaaaattttaacattgatgaatatgaagtgtccctcct
cttttttttttttttttgataactttgggttgaaagtcgaatttatttga
tattagaatggctactccaacttgtttctttggaacatttgcttggataa
ttgttttccagccttttactctaaggtaatatctgtatttgtccctgaga
tttgtttctagtatgcttggtcttgcttacacatcctgtctgttattcta
tgtctttttattggtgaattgtgtccgctgatattatgagatattaagga
aaagtagttgttccttcctgttatttttgttgttagagttggaatgtgat
tcatgtagctttcttcttttaggtttgcttcaagatcaatttcttggttt
ttctagagtgtaatttccctccttatattggagttttcccattattaccc
ccttgatgggcttgatttgttcgagcatattgtgtagatatcgttttttt
cacagaataccttgttttctcaatctattgtaaaattttttgatgcgtct
agtagccttgtctggcatttcttttcccttagggtctgtatgacatctgc
cctggatattatggctttcataatctctagggataagttaggtatagttt
tgataggatttcctttataagtcacttgaccattttcccttagagctttt
aatattcttcttttttcttttctttctttctttctttctttctttctttc
tttctttctttctttctttctttctttctttctttctttctttctttctt
tctttctttctttttttttatgcatttggagttttgatttctatatgatg
gaagaaatttctcttgtggtccaaactatttggagttttgtacgctactt
gtatattcataggcaactcttttctataggttaagggaagtttttcttct
ataattttgttgaatatattcactgtccctaaattt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagactgagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactattgccggggcccagcaaa
acacagaagtggatgcctcacagtcatctaatggaatggatcatagggct
cccaatggaaggagctagagaaagtagccaaggagctaaaggatcctggc
acccttataggtggacaacattatgagctaccagtaccccagagcttctt
gactctctagcctgccattataatatcaaagatgtccctagtcgaccatt
cactggtaaagaaggcccaattggtacttgcaactatatgctcagttaca
ggggaacacaaggccctaaaaagggggtagattgacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_177164091_177164567
seq2: B6Ng01-282B17.b_68_386 (reverse)

seq1  CCAACTCTAACAACAAAAATAAAAGGAAGCAACAATTACTTTTCCTTAAT  50
      |||||||||||||||||||||| |||||| ||||| ||||||||||||||
seq2  CCAACTCTAACAACAAAAATAACAGGAAGGAACAACTACTTTTCCTTAAT  50

seq1  ATCTCTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAA  100
      ||||| ||||||||  |||| |||||| |||||||||||||||||| |||
seq2  ATCTCATAATATCAGCGGACACAATTCACCAATAAAAAGACATAGAATAA  100

seq1  CAGACTGGCTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACC  150
      ||||| || |    || || |||| |          || |||  ||||| 
seq2  CAGACAGGATGTGTAAGCAAGACCAA----------GCATACTAGAAACA  140

seq1  CATCTCAGGGAAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAAC  200
       |||||||||| ||| ||||| | ||||| ||||| ||||||||||||||
seq2  AATCTCAGGGACAAATACAGATATTACCTTAGAGTAAAAGGCTGGAAAAC  190

seq1  AATTTTCCAAGCAAATGGTCTGAAGAAACAAGCTGGAGTAGCCATTCTAA  250
      |||| |||||||||||| ||  |||||||||| |||||||||||||||||
seq2  AATTATCCAAGCAAATGTTCCAAAGAAACAAGTTGGAGTAGCCATTCTAA  240

seq1  TATCGGATAAAATCGACTTCCAACCCAAAGTTATCAAAAAAGACA-----  295
      ||||  ||||| ||||||| ||||||||||||||||||||| | |     
seq2  TATCAAATAAATTCGACTTTCAACCCAAAGTTATCAAAAAAAAAAAAAAA  290

seq1  --AGGAGGGACACTTCATACTCATCAAAGGCAAAATCCTCCAAGAGGAAC  343
        ||||||||||||||||| ||||||| |                     
seq2  AGAGGAGGGACACTTCATATTCATCAATG---------------------  319

seq1  TCTCAATTCTGAATATCTACGCTCCAAATGCAAGGGCAGCCACATTCATT  393
                                                        
seq2  --------------------------------------------------  319

seq1  AAAGACACTTTAGTAAAGCTCAAAGCACACATTGCACCTCACACAATAAT  443
                                                        
seq2  --------------------------------------------------  319

seq1  AGTGGGAGACTTCAACACACCACTTTCATCAATG  477
                                        
seq2  ----------------------------------  319