BAC Information

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BAC

Clone NameB6Ng01-282D24
Chromosome1 (Build37)
Map Location 111,720,331 - 111,721,732
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG666508, Cdh7, LOC100041429, EG626652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D24.bB6Ng01-282D24.g
ACCGA081518GA081519
length1,1991,099
definitionB6Ng01-282D24.b B6Ng01-282D24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccgtatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttttgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgat
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctcatagaactctgcattaaacccgtctg
gtcctgggctttttttggcagggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacatggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtctagccttttgaagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagctaagggtttttcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
ctttttagatgtgttgtcaagctgctagtatgtgctctcttcccgttttc
ttcttgggaggcactcagagctatgagtttccctcttagaaatgcttttc
attgtgttcccataggttgggtactttgtgcttcgtttcattaactctaa
aaggtctttaatttctttctttactccttctagacaagatatcattgaag
aagaagtgtgtcagattccacgtgaagttggccttccggtaatcaattcg
taatggagatcacgccctaaggtggcaatgtgtgaatctctgcaaatag

gaattctcttcttacagttgcacatttatttgttctctcagcatctctct
ctccctctccctcaatccctcagttcatcctttcctccctcttttcttcc
tcccttcctaatactttcttcttaatttgatatgtgacacacacacacac
acacacacacacacacacacctttaattcttgagaattaaaataagtata
tggaatataaaatccttttatataatgtcttaaatttttagccctcataa
gaaataataatgagtttcagcaatgtcaaattaggacaaagaatctgaag
gatcattgagcacgggtagacaagcttgcagtgcataatttgccaaacaa
gctgagtcacttaattactggatcaatgcaaggttaattattcctatcaa
ctgtcacaattgttgaaggcttctgtgaggcaatattaacagaagactaa
tagtgcagagcttgagatggctatgatgtattccaaggcatgaaactagt
gtgagaggctttcttagggcacaggtaagtgctgacttactacagtagcc
tggccagctcagctgctctaaaactgaaatagtacatatcaaaaggtctg
agatttcacataatttatatttttttcacagtaccctgttagtggataaa
atgcaaacaactatcaatcaatataacatgataaattacttgaaattgca
tcttaatgaatctgaacatgttaaaaagaatttatgtattatcttttgaa
gtctttgaactacaaccctttaaaacactggttttcaattttcctaattc
tgtgaccctttaatacagtcttgttgggatgacctccaaccataaaaatt
actgttgtcactacttcatatatataattttgctactgttatgaatagta
gtataaatatttttggagatagaagtctgacaaaggggtcatgaccacag
gttgaaagctgctgctttaaatacaactaatatatgatacatactagaag
aaaaaacatttttattggtggaaaatcaatatgatcagttcaaatgagta
cattgttttacagaaaagaaattaccgtacgaatttgaatacattccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111720331_111721732
seq2: B6Ng01-282D24.g_65_1163 (reverse)

seq1  TTGGAATGTATTCTTAGCAGTCCTCCTGCTTTCCCCAATCCAAAAGCTAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  AAATGTGATTAGATGTCATGAAAACCTCTAAGAGATTTCTTTATTTTGTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATAACAGGTTGACTCATGCTCCCAACAATATATCAGATTACAACTTTGAC  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGACTTGCTTTTCTTTGGTATTAATGAAATATAACTACTTCAATGCT  200
                                                        
seq2  --------------------------------------------------  0

seq1  GGGACATGACATGTAAGAAATTCTGATTTGGGTTTATGGACTATGCTCAC  250
                                                        
seq2  --------------------------------------------------  0

seq1  ACATAGCTCAAATTTAAATCTTAATTCCCTTACGATAAAAACTGTGCCTT  300
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTTGAATGTATTTAAAATTCGTAC-GTTATTTC-TTTCTGTAAAACAA  348
        || ||||||| || |||||||||| || ||||| ||||||||||||||
seq2  --TTGGAATGTA-TTCAAATTCGTACGGTAATTTCTTTTCTGTAAAACAA  47

seq1  TGTACTTCATTTTGAACTGATCATATTGATTTTCCA-CAATAAAAATTGT  397
      ||||| ||| |||||||||||||||||||||||||| ||||||||| |||
seq2  TGTAC-TCA-TTTGAACTGATCATATTGATTTTCCACCAATAAAAA-TGT  94

seq1  TTTTTCTTCTAGTATGTTATCATATATTAGTTGTATTTAAAGCAGCAGCT  447
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCTAGTATG-TATCATATATTAGTTGTATTTAAAGCAGCAGCT  143

seq1  TTCAACCTGTGGTCATGACCCCTTTGTCAGACTTCTATCT-CAAAAATAT  496
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCAACCTGTGGTCATGACCCCTTTGTCAGACTTCTATCTCCAAAAATAT  193

seq1  TTATACTACTATTCATAACAGTAGCAAAATTATATATATGAAGTAGTGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTACTATTCATAACAGTAGCAAAATTATATATATGAAGTAGTGAC  243

seq1  AACAGTAATTTTTATGGTTGGAGGTCATCCCAACAAGACTGTATTAAAGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAATTTTTATGGTTGGAGGTCATCCCAACAAGACTGTATTAAAGG  293

seq1  GTCACAGAATTAGGAAAATTGAAAACCAGTGTTTTAAAGGGTTGTAGTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGAATTAGGAAAATTGAAAACCAGTGTTTTAAAGGGTTGTAGTTC  343

seq1  AAAGACTTCAAAAGATAATACATAAATTCTTTTTAACATGTTCAGATTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTCAAAAGATAATACATAAATTCTTTTTAACATGTTCAGATTCA  393

seq1  TTAAGATGCAATTTCAAGTAATTTATCATGTTATATTGATTGATAGTTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATGCAATTTCAAGTAATTTATCATGTTATATTGATTGATAGTTGT  443

seq1  TTGCATTTTATCCACTAACAGGGTACTGTGAAAAAAATATAAATTATGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTTATCCACTAACAGGGTACTGTGAAAAAAATATAAATTATGTG  493

seq1  AAATCTCAGACCTTTTGATATGTACTATTTCAGTTTTAGAGCAGCTGAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAGACCTTTTGATATGTACTATTTCAGTTTTAGAGCAGCTGAGC  543

seq1  TGGCCAGGCTACTGTAGTAAGTCAGCACTTACCTGTGCCCTAAGAAAGCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGCTACTGTAGTAAGTCAGCACTTACCTGTGCCCTAAGAAAGCC  593

seq1  TCTCACACTAGTTTCATGCCTTGGAATACATCATAGCCATCTCAAGCTCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACACTAGTTTCATGCCTTGGAATACATCATAGCCATCTCAAGCTCT  643

seq1  GCACTATTAGTCTTCTGTTAATATTGCCTCACAGAAGCCTTCAACAATTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATTAGTCTTCTGTTAATATTGCCTCACAGAAGCCTTCAACAATTG  693

seq1  TGACAGTTGATAGGAATAATTAACCTTGCATTGATCCAGTAATTAAGTGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTGATAGGAATAATTAACCTTGCATTGATCCAGTAATTAAGTGA  743

seq1  CTCAGCTTGTTTGGCAAATTATGCACTGCAAGCTTGTCTACCCGTGCTCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTTGTTTGGCAAATTATGCACTGCAAGCTTGTCTACCCGTGCTCA  793

seq1  ATGATCCTTCAGATTCTTTGTCCTAATTTGACATTGCTGAAACTCATTAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCCTTCAGATTCTTTGTCCTAATTTGACATTGCTGAAACTCATTAT  843

seq1  TATTTCTTATGAGGGCTAAAAATTTAAGACATTATATAAAAGGATTTTAT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTATGAGGGCTAAAAATTTAAGACATTATATAAAAGGATTTTAT  893

seq1  ATTCCATATACTTATTTTAATTCTCAAGAATTAAAGGTGTGTGTGTGTGT  1246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATATACTTATTTTAATTCTCAAGAATTAAAGGTGTGTGTGTGTGT  943

seq1  GTGTGTGTGTGTGTGTGTGTCACATATCAAATTAAGAAGAAAGTATTAGG  1296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTCACATATCAAATTAAGAAGAAAGTATTAGG  993

seq1  AAGGGAGGAAGAAAAGAGGGAGGAAAGGATGAACTGAGGGATTGAGGGAG  1346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGAAGAAAAGAGGGAGGAAAGGATGAACTGAGGGATTGAGGGAG  1043

seq1  AGGGAGAGAGAGATGCTGAGAGAACAAATAAATGTGCAACTGTAAGAAGA  1396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGAGAGATGCTGAGAGAACAAATAAATGTGCAACTGTAAGAAGA  1093

seq1  GAATTC  1402
      ||||||
seq2  GAATTC  1099


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