BAC Information

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BAC

Clone NameB6Ng01-282M05
Chromosome1 (Build37)
Map Location 62,421,389 - 62,422,438
singlet/doubletsinglet
Overlap genePard3b
Upstream genenone
Downstream geneLOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282M05.bB6Ng01-282M05.g
ACCGA081895GA081896
length1,0581,171
definitionB6Ng01-282M05.b B6Ng01-282M05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttttcttctggaaaatgtagacctcttccccctaccccctta
gcaacagcgatcgaaggatgattgaatggtctcttgtggaaaaatgtatt
tacctatgtgaagatcggtttcaactcagcacattcttcttgtgagcaca
ttctaccggtgaactaacctgtaacctctcagggtgttgacatctcttca
gcttataactctgtgtgtgtgcgtgtgtgtgtgtgtgtgcacatgttcat
tggtggttacaagtactacatgtatttgtttatgagctcagaatccagaa
actaacttggagaaaagccgttagaaagatctcttttaagttttattttc
ttaaaaatattaagccagcttgattaacccatacatatgtacacatacaa
agacaattgcacatggtcacatacctgtgtgcaagatgaactcaacccaa
aggtggtagaattgtacagaggaaaaagaacacaagagaacgtcctgaag
acaccattggtttccttgccactaattacaacctaagataacaatgaaat
ggcaaggggtatttgtgtgtgtcgtttcagagcctacttgcagtgacctt
agatagagtgcagttttttagttacaaaactgtctctgatatttgaagcc
ttgcacttttttttcctctatgatctttctatctggccctaaggtggggg
agggggaaaagcctgttgatcttgccctaatgagtttgcatgacccatgg
aaaggggggtgctcttgtgtgctagaagttgcttatcactagttcaatcc
tttccacagcctgtgaaatgttactccatagatcacaccagagtgatgga
tgagagtaagtgagaacaaatagatcaagttattttcttcctcatgtgtc
ttttacctcaagcagatgtgcatacttggtgatataacctaattgacaca
cacctccctcaaacgtggggccttattccaattcttccacgattcaaaat
gtaaaccattctgcattgaaagttacagcccgaaatggttgatttctaat
catccttt
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccgaggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaagggcagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcaggagggtattcagctaaagcaaaaaatatcatggca
aagatgggttataaagaaggaaaagggttaggacatcaagaacagggaag
gatagagcccatcttcacctaatggaaaccaagacagacagggtctgggt
tttccatagcgccattggggcagcacgactcataccatgaaaacagggga
cccagtgtgggttctcatggcactatctctgaaaactagaagcttgtgat
tcaactggttagagacataaaacctaggccattatttgacgtctactcac
atgaatactccaatttgattaagaagtcaggaaagtggaaacgtctccta
gtagacactccatgaatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62421389_62422438
seq2: B6Ng01-282M05.b_46_1103

seq1  GAATTCTTTTTTCTTCTGGAAAATGTAGACCTCTTCCCCCTACCCCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTCTTCTGGAAAATGTAGACCTCTTCCCCCTACCCCCTTA  50

seq1  GCAACAGCGATCGAAGGATGATTGAATGGTCTCTTGTGGAAAAATGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGCGATCGAAGGATGATTGAATGGTCTCTTGTGGAAAAATGTATT  100

seq1  TACCTATGTGAAGATCGGTTTCAACTCAGCACATTCTTCTTGTGAGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATGTGAAGATCGGTTTCAACTCAGCACATTCTTCTTGTGAGCACA  150

seq1  TTCTACCGGTGAACTAACCTGTAACCTCTCAGGGTGTTGACATCTCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCGGTGAACTAACCTGTAACCTCTCAGGGTGTTGACATCTCTTCA  200

seq1  GCTTATAACTCTGTGTGTGTGCGTGTGTGTGTGTGTGTGCACATGTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAACTCTGTGTGTGTGCGTGTGTGTGTGTGTGTGCACATGTTCAT  250

seq1  TGGTGGTTACAAGTACTACATGTATTTGTTTATGAGCTCAGAATCCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTTACAAGTACTACATGTATTTGTTTATGAGCTCAGAATCCAGAA  300

seq1  ACTAACTTGGAGAAAAGCCGTTAGAAAGATCTCTTTTAAGTTTTATTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTTGGAGAAAAGCCGTTAGAAAGATCTCTTTTAAGTTTTATTTTC  350

seq1  TTAAAAATATTAAGCCAGCTTGATTAACCCATACATATGTACACATACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATATTAAGCCAGCTTGATTAACCCATACATATGTACACATACAA  400

seq1  AGACAATTGCACATGGTCACATACCTGTGTGCAAGATGAACTCAACCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTGCACATGGTCACATACCTGTGTGCAAGATGAACTCAACCCAA  450

seq1  AGGTGGTAGAATTGTACAGAGGAAAAAGAACACAAGAGAACGTCCTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTAGAATTGTACAGAGGAAAAAGAACACAAGAGAACGTCCTGAAG  500

seq1  ACACCATTGGTTTCCTTGCCACTAATTACAACCTAAGATAACAATGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTGGTTTCCTTGCCACTAATTACAACCTAAGATAACAATGAAAT  550

seq1  GGCAAGGGGTATTTGTGTGTGTCGTTTCAGAGCCTACTTGCAGTGACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGGGTATTTGTGTGTGTCGTTTCAGAGCCTACTTGCAGTGACCTT  600

seq1  AGATAGAGTGCAGTTTTTTAGTTACAAAACTGTCTCTGATATTTGAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAGTGCAGTTTTTTAGTTACAAAACTGTCTCTGATATTTGAAGCC  650

seq1  TTGCACTTTTTTTTCCTCTATGATCTTTCTATCTGGCCCTAAGGTGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTTTTTTTTCCTCTATGATCTTTCTATCTGGCCCTAAGGTGGGGG  700

seq1  AGGGGGAAAAGCCTGTTGATCTTGCCCTAATGAGTTTGCATGACCCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAAAGCCTGTTGATCTTGCCCTAATGAGTTTGCATGACCCATGG  750

seq1  AAAGGGGGGTGCTCTTGTGTGCTAGAAGTTGCTTATCACTAGTTCAATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGGGTGCTCTTGTGTGCTAGAAGTTGCTTATCACTAGTTCAATCC  800

seq1  TTTCCACAGCCTGTGAAATGTTACTCCATAGATCACACCAGAGTGATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACAGCCTGTGAAATGTTACTCCATAGATCACACCAGAGTGATGGA  850

seq1  TGAGAGTAAGTGAGAACAAAATAGATCAAG-TAATTTCTTCCTCATGTGT  899
      ||||||||||||||||| |||||||||||| || ||||||||||||||||
seq2  TGAGAGTAAGTGAGAAC-AAATAGATCAAGTTATTTTCTTCCTCATGTGT  899

seq1  CTTTTACCTCAAGCAGATGTGCATACTTGGTGATATAACCTAATTGACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCTCAAGCAGATGTGCATACTTGGTGATATAACCTAATTGACAC  949

seq1  ACACCTCCCTCAAACGT-GGGCCTTATT-CAATTC-TCCACGATCAAAAA  996
      ||||||||||||||||| |||||||||| |||||| ||||||||  ||||
seq2  ACACCTCCCTCAAACGTGGGGCCTTATTCCAATTCTTCCACGATTCAAAA  999

seq1  TGT-AACAATTCTGCATTG-AAGTTACAG-CCGAAAT-GTTGATTTCT-A  1041
      ||| ||| ||||||||||| ||||||||| ||||||| |||||||||| |
seq2  TGTAAACCATTCTGCATTGAAAGTTACAGCCCGAAATGGTTGATTTCTAA  1049

seq1  TCATCCTTT  1050
      |||||||||
seq2  TCATCCTTT  1058