MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-283G06
Chromosome	1 (Build37)
Map Location	66,249,423 - 66,372,649
singlet/doublet	doublet
Overlap gene	Mtap2
Upstream gene	Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775, Crygf, LOC667781, EG667786
Downstream gene	C030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Pip5k3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18711 MGI:1335106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pthr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213527 MGI:2180917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042716 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042716
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG628894 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628894 MGI:3645967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100043165 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs pseudo : _no_value

name	LOC383520 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383520
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG667775 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667775 MGI:3643512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	Crygf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12969 MGI:88526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG667786 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667786 MGI:3643091
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Mtap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17756 MGI:97175
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	C030018G13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241076 MGI:2445028
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpe (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66646 MGI:1913896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110028C15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68691 MGI:1915941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acadl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11363 MGI:87866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17901 MGI:97269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 602 ESTs, 7 Proteins

name	Lancl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14768 MGI:1336997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227231 MGI:891996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pip5k3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115529472 GeneID:18711 MGI:1335106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-3- phosphate/phosphatidylinositol 5-kinase, type III transcript_id : NM_011086.2

name	Pthr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625877 GeneID:213527 MGI:2180917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parathyroid hormone receptor 2 transcript_id : NM_139270.2

name	EG628894 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233877 GeneID:628894 MGI:3645967
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG628894 transcript_id : XM_001478684.1

name	Crygf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802466 GeneID:12969 MGI:88526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : crystallin, gamma F transcript_id : NM_027010.2

name	Mtap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90186269 GeneID:17756 MGI:97175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 2 transcript_id : NM_001039934.1

name	Mtap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68341934 GeneID:17756 MGI:97175
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule-associated protein 2 transcript_id : NM_008632.2

name	C030018G13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233764 GeneID:241076 MGI:2445028
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C030018G13 gene transcript_id : XM_001471866.1

name	Rpe (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801666 GeneID:66646 MGI:1913896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribulose-5-phosphate-3-epimerase transcript_id : NM_025683.2

name	1110028C15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83816894 GeneID:68691 MGI:1915941
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110028C15 gene transcript_id : NM_177645.3

name	Acadl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372248 GeneID:11363 MGI:87866
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-Coenzyme A dehydrogenase, long-chain transcript_id : NM_007381.3

name	Myl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802182 GeneID:17901 MGI:97269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, light polypeptide 1 transcript_id : NM_021285.2

name	LOC100043192 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233920 GeneID:100043192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 602 ESTs, 7 Proteins product : similar to ribosomal protein L31 transcript_id : XM_001479822.1

name	Lancl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892201 GeneID:14768 MGI:1336997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LanC (bacterial lantibiotic synthetase component C)-like 1 transcript_id : NM_021295.2

name	Cps1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248511 GeneID:227231 MGI:891996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbamoyl-phosphate synthetase 1 transcript_id : NM_001080809.1

name	Pip5k3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115529473 GeneID:18711 MGI:1335106
definition	GO_component : GO:0012506 - vesicle membrane [Evidence IDA] GO_function : GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IEA] [Evidence IDA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] [Evidence IDA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] [Evidence IDA] codon_start : 1 note : PtdIns(4)P-5-kinase; FYVE finger-containing phosphoinositide kinase; phosphatidylinositol-4-phosphate 5-kinase, type III product : 1-phosphatidylinositol-4-phosphate 5-kinase protein_id : NP_035216.2

name	Pthr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29293832 CCDS:CCDS15017.1 GeneID:213527 MGI:2180917
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : parathyroid hormone receptor 2 protein_id : NP_644676.1

name	EG628894 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233878 GeneID:628894 MGI:3645967
definition	codon_start : 1 product : similar to nudix (nucleoside diphosphate linked moiety X)-type motif 6 protein_id : XP_001478734.1

name	Crygf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746155 CCDS:CCDS15018.1 GeneID:12969 MGI:88526
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA] GO_process : GO:0001654 - eye development [Evidence IMP]; GO:0007423 - sensory organ development [Evidence IEA] codon_start : 1 product : crystallin, gamma F protein_id : NP_081286.1

name	Mtap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90186270 CCDS:CCDS15020.1 GeneID:17756 MGI:97175
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0043198 - dendritic shaft [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence TAS] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005519 - cytoskeletal regulatory protein binding [Evidence TAS] GO_process : GO:0016358 - dendrite development [Evidence IMP]; GO:0001578 - microtubule bundle formation [Evidence IMP]; GO:0007026 - negative regulation of microtubule depolymerization [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : microtubule-associated protein 2 isoform 1 protein_id : NP_001035023.1

name	Mtap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68341935 GeneID:17756 MGI:97175
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0043198 - dendritic shaft [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence TAS] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005519 - cytoskeletal regulatory protein binding [Evidence TAS] GO_process : GO:0016358 - dendrite development [Evidence IMP]; GO:0001578 - microtubule bundle formation [Evidence IMP]; GO:0007026 - negative regulation of microtubule depolymerization [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : microtubule-associated protein 2 isoform 2 protein_id : NP_032658.2

name	C030018G13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233765 GeneID:241076 MGI:2445028
definition	codon_start : 1 product : hypothetical protein LOC241076 protein_id : XP_001471916.1

name	Rpe (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532955 CCDS:CCDS15022.1 GeneID:66646 MGI:1913896
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004750 - ribulose-phosphate 3-epimerase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : ribulose-5-phosphate-3-epimerase protein_id : NP_079959.2

name	1110028C15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83816895 GeneID:68691 MGI:1915941
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC68691 protein_id : NP_808313.2

name	Acadl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982520 CCDS:CCDS15023.1 GeneID:11363 MGI:87866
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0004466 - long-chain-acyl-CoA dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : acetyl-Coenzyme A dehydrogenase, long-chain protein_id : NP_031407.2

name	Myl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789016 CCDS:CCDS15024.1 GeneID:17901 MGI:97269
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016459 - myosin [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : myosin light chain, alkali, fast skeletal muscle; myosin, light polypeptide 4, alkali; atrial, embryonic; myosin, light polypeptide 1, alkali; atrial, embryonic product : myosin, light polypeptide 1 protein_id : NP_067260.1

name	LOC100043192 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233921 GeneID:100043192
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479872.1

name	Lancl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21489937 CCDS:CCDS15025.1 GeneID:14768 MGI:1336997
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0050750 - low-density lipoprotein receptor binding [Evidence ISS] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] codon_start : 1 note : G protein-coupled receptor 69; G protein-coupled receptor 69A; LanC-like protein 1; LanC (bacterial lantibiotic synthetase component C)-like product : LanC (bacterial lantibiotic synthetase component C)-like 1 protein_id : NP_067270.1

name	Cps1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124248512 GeneID:227231 MGI:891996
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004087 - carbamoyl-phosphate synthase (ammonia) activity [Evidence IEA]; GO:0004086 - carbamoyl-phosphate synthase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006526 - arginine biosynthesis [Evidence IEA]; GO:0006541 - glutamine metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0006807 - nitrogen compound metabolism [Evidence IEA]; GO:0019856 - pyrimidine base biosynthesis [Evidence IEA]; GO:0000050 - urea cycle [Evidence IEA] codon_start : 1 note : CPSase I; carbamoylphosphate synthetase I product : carbamoyl-phosphate synthetase 1 protein_id : NP_001074278.1

name	LOC100042716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042716
definition	number : 2 pseudo : _no_value

name	LOC100042716 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042716
definition	number : 1 pseudo : _no_value

name	LOC383520 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383520
definition	number : 1 pseudo : _no_value

name	EG667775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667775
definition	number : 1 pseudo : _no_value

name	EG667775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667775
definition	number : 2 pseudo : _no_value

name	LOC667781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667781
definition	number : 3 pseudo : _no_value

name	LOC667781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667781
definition	number : 2 pseudo : _no_value

name	LOC667781 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667781
definition	number : 1 pseudo : _no_value

name	EG667786 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667786
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128685
definition	standard_name : D1Mit327

name	(CDS detail)
type	STS
link
xref	UniSTS:129637
definition	standard_name : D3Mit217

name	(CDS detail)
type	STS
link
xref	UniSTS:158015
definition	standard_name : GDB:595139

name	(CDS detail)
type	STS
link
xref	UniSTS:224425
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:116704
definition	standard_name : D1Mit76

name	(CDS detail)
type	STS
link
xref	UniSTS:128493
definition	standard_name : D1Mit156

name	(CDS detail)
type	STS
link
xref	UniSTS:463202
definition	standard_name : Cryge

name	(CDS detail)
type	STS
link
xref	UniSTS:259206
definition	standard_name : Cryge

name	(CDS detail)
type	STS
link
xref	UniSTS:128652
definition	standard_name : D1Mit299

name	(CDS detail)
type	STS
link
xref	UniSTS:124163
definition	standard_name : 35.MMHAP90FRD11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123848
definition	standard_name : 29.MMHAP15FLB5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:497296
definition	standard_name : Mtap2

name	(CDS detail)
type	STS
link
xref	UniSTS:275868
definition	standard_name : Mtap2

name	(CDS detail)
type	STS
link
xref	UniSTS:123196
definition	standard_name : 14.MMHAP11FLE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:224714
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:269537
definition	standard_name : MARC_5533-5534:1031674173:1

name	(CDS detail)
type	STS
link
xref	UniSTS:125358
definition	standard_name : MHAa81h11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178405
definition	standard_name : AI427598

name	(CDS detail)
type	STS
link
xref	UniSTS:207168
definition	standard_name : RH126755

name	(CDS detail)
type	STS
link
xref	UniSTS:158804
definition	standard_name : AA960361

name	(CDS detail)
type	STS
link
xref	UniSTS:210456
definition	standard_name : RH136471

name	(CDS detail)
type	STS
link
xref	UniSTS:105159
definition	standard_name : ACADL

name	(CDS detail)
type	STS
link
xref	UniSTS:212994
definition	standard_name : RH129698

name	(CDS detail)
type	STS
link
xref	UniSTS:128550
definition	standard_name : D1Mit21

name	(CDS detail)
type	STS
link
xref	UniSTS:128551
definition	standard_name : D1Mit21.1

name	(CDS detail)
type	STS
link
xref	UniSTS:178407
definition	standard_name : AW124738

name	(CDS detail)
type	STS
link
xref	UniSTS:128723
definition	standard_name : D1Mit364

name	LOC100043165 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233919 GeneID:100043165
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100043165 pseudo : _no_value transcript_id : XR_034376.1

clone name	MSMg01-197L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455L19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-105O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-056P05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-060A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-377P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092P11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-283G06.b	B6Ng01-283G06.g
ACC	GA082364	GA082365
length	1,026	1,144
definition	B6Ng01-283G06.b	B6Ng01-283G06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(66,249,423 - 66,250,451)	(66,371,492 - 66,372,649)
sequence	gaattctttatcttaacagtgtttacttaattaagccccaaagatctttc cccaaaacaatgtaatagtcacagggtcttggaactctagcatctacata aatattcaagagggtgttgctattttttactaggacacttgcctttttga agggtagagtaacaatatgcatactatgggtattgtgaatagagtttggg gacaggagagatatggagatcctgaacctgaagtttggtctatagttcta tcattaaaatccaaaagctaatggggcaagtcttgtaccccattatgatt ataatggaattgcttccattatatgattatatatgtatatataattccat tatctgaaaatagttcctttataatctttcttaatatctagttctttctg gatgttagactgtggaactccaaaggttagcatcttggcatcaagaggca actagagagtcacccattaggttataaatgcgctaagtttcctgtactgc gccacttagcacatgaatacagaaggtgaggcatatattcttttattctt aatatagagaagataatatagtcataaaatttcttacagacaaaaaggaa cattttggggagctctagaactgcagaaatacttcatatgaatggcataa ggaaatagggtattgaggggtgctttctcacaactttcagttaatctata cagctgtcacttggttaataaatcatgtttttaagatagttttgagcatc ttgccttgaattatgttagcttttatattttaaaagttctgtacctccta attattttatttatattaaaatataaaatcaatattacacatgggcacac attagaaaggaacaatggtaaacatctttaaattgcttccatggcattaa taagaatctccagaaagtgcactgtggtttaaaatttaatggtatcatac aaaagtatgtcatataaatagtctcagaagcctcagtttctatttctttc tttttttttttttggtttttctgaga	gaattctctaatgttcacatatagatcactcaaccaattataaaactcca tgataaaggtaagaaaaatgctgtattaattcatctaaaaacctctgagt tgatctgtcagctttcttgaaagtaaatgctcctaattaaatatattata taaaatacatgaaaacatgagtattatatatatatatatatatatatata tatacatttaatatataagaacttgaatgatgtaattattggacacatat ttctattacatgtaaatgaaaatctgtaaagcctattgtttgataatata gtagccttccattatacatataaataaggtattaagaaaataactgtgta taaaaatcttctagaaacatttcatctttatgaatgtctatgagggcttc agggcagactcagaaattatactgttggagcctcagttcagtcatctata aaatggagactatgtctaaggattacagagagagttaaatgagatattac atgctaagagcttaagataatgtcaggcagatagttaataatagcaagtt atagttctaatgaacaaaagcaagtgataataaattacattctccacaat tattatggttctaaaagtttctttacaaagtctttggctatagagaacct aattccctgtactctcatccttttttatttttgcttttcaaaccaggaac tattgtcctagacacactatggactggaactggcaatcctcctgccttag ctacctggattctgggattacaggggagccatcactcctgcttatagaat ctagtcttcactgttcttttgctcatatgagatcatttatagcatggcat ttgcagagaaatcaagagatcaagtcctctgccctctgctactgcagaag cttgggcaggagacctgaagtgtagtcagcagagtggagcctggaatact gtgtggggaaggtgcccataagcaaaaccaggctgcagtttgcctttttg tctccttctggtgaaactgaaaaaaattcctctttactaatatcagaaaa attatttcattcatatcctaagaaattttcacacatagtctacctttcct gcaataattatcttatactactactaggatgaggtagctcaggt
quality values	Open. 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Hide. 62 35 56 47 62 62 62 62 47 62 62 62 62 62 62 44 44 62 59 62 62 62 62 62 59 59 59 62 59 62 54 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 54 54 59 62 59 59 62 62 62 62 62 62 62 62 62 62 42 54 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 54 62 62 62 62 62 54 62 62 62 62 59 59 54 54 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 59 62 62 59 59 62 62 59 59 62 62 59 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 59 49 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 56 62 62 62 62 62 43 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 48 62 41 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 48 58 54 58 58 58 54 58 58 58 45 42 58 54 58 54 58 58 58 58 58 54 58 54 58 49 54 58 54 58 54 54 58 58 54 52 54 42 54 58 58 45 54 58 58 58 58 58 58 52 52 52 54 58 58 43 54 58 54 48 58 58 52 47 47 58 58 58 58 58 54 54 58 58 58 54 58 53 58 58 58 58 51 46 58 51 52 54 58 54 47 58 50 51 52 58 54 51 51 58 45 46 53 49 49 49 58 50 48 54 50 58 58 41 40 58 51 47 49 58 54 58 50 51 58 52 53 53 58 51 41 48 28 49 58 50 53 53 53 58 58 51 41 43 41 50 53 50 46 58 40 58 30 18 54 52 53 50 50 50 54 58 58 43 58 43 38 53 52 58 52 47 29 50 53 54 32 58 58 58 58 38 41 35 58 58 51 51 47 45 53 54 46 52 39 32 54 40 35 52 32 24 49 54 41 32 38 40 51 40 51 39 40 47 41 41 24 33 37 32 42 42 52 53 53 37 46 44 47 38 37 42 39 44 27 34 32 52 54 35 32 33 37 45 53 34 30 53 37 45 37 52 37 40 41 10 47 40 35 53 46 32 40 32 35 33 42 42 24 40 49 30 34 24 32 31 37 34 20 49 40 40 34 17 47 40 21 40 40 28 31 35 31 43 31 42 30 30 35 33 31 32 31 42 51 28 34 30 30 30 30 31 27 31 31 23 30 35 37 30 31 30 31 46 46 31 33 29 29 29 23 31 30 32 33 42 29 31 32 31 25 31 48 41 31 31 32 31 31 32 31 31 34 32 33 35 46 29 27 30 33 24 39 19 35 46 31 31 32 17 33 24 41 22 33 27 32 24 25 20 32 25 31 31 31 31 34 25 29 18 31 36 32 32 38 21 23 26 31 31 20 17 9 37 48 18 29 11 31 10 36 18 22 26 25 17 31 21 31 15 17 31 21 30 31 19 19 26 23 25 12 16 31 21 25 32 31 21 33 10 25 17 24 10 6 20 21 22 16 12 4 9 23 24 32 27 17 10 30 14 10 48 36 14 13 12 26 21 13 30 8 28 31 24 21 13 24 22 24 20 38 31 18 10 10 6 13 11 20 21 26 27 27 24 28 47 25 27 18 13 14 32 47 34 19 4 3 3 6 9 13 6 5 18 17 29 20 8 15 15 30 25 24 24 17 20 38 38 47 38 38 18 21 15 12 8 19 27 8 30 14 2 5 10 18 7 12 6 6 8 8 7 18 27 27 25 15 14 7 6 7 14 3 3 2 6 7 13 5 6 6 1 4 4 14 6 6 13 10 28 14 2 19 19 6 9 8 8 8 7 6 11 7 6 12 6 16 16 8 15 13 20 16 10 5 5 8 3 3 3 4 6 6 5 1 6 12 18 5 8 3 4 11 15 5 11 20 8 6 9 12 4 12 11 2 7 2 3 1 1 4 7 9 16 5 6 9 20 4 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_66249423_66250451
seq2: B6Ng01-283G06.b_39_1064

seq1  GAATTCTTTATCTTAACAGTGTTTACTTAATTAAGCCCCAAAGATCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATCTTAACAGTGTTTACTTAATTAAGCCCCAAAGATCTTTC  50

seq1  CCCAAAACAATGTAATAGTCACAGGGTCTTGGAACTCTAGCATCTACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACAATGTAATAGTCACAGGGTCTTGGAACTCTAGCATCTACATA  100

seq1  AATATTCAAGAGGGTGTTGCTATTTTTTACTAGGACACTTGCCTTTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCAAGAGGGTGTTGCTATTTTTTACTAGGACACTTGCCTTTTTGA  150

seq1  AGGGTAGAGTAACAATATGCATACTATGGGTATTGTGAATAGAGTTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGAGTAACAATATGCATACTATGGGTATTGTGAATAGAGTTTGGG  200

seq1  GACAGGAGAGATATGGAGATCCTGAACCTGAAGTTTGGTCTATAGTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGAGATATGGAGATCCTGAACCTGAAGTTTGGTCTATAGTTCTA  250

seq1  TCATTAAAATCCAAAAGCTAATGGGGCAAGTCTTGTACCCCATTATGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAATCCAAAAGCTAATGGGGCAAGTCTTGTACCCCATTATGATT  300

seq1  ATAATGGAATTGCTTCCATTATATGATTATATATGTATATATAATTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGAATTGCTTCCATTATATGATTATATATGTATATATAATTCCAT  350

seq1  TATCTGAAAATAGTTCCTTTATAATCTTTCTTAATATCTAGTTCTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAAAATAGTTCCTTTATAATCTTTCTTAATATCTAGTTCTTTCTG  400

seq1  GATGTTAGACTGTGGAACTCCAAAGGTTAGCATCTTGGCATCAAGAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTAGACTGTGGAACTCCAAAGGTTAGCATCTTGGCATCAAGAGGCA  450

seq1  ACTAGAGAGTCACCCATTAGGTTATAAATGCGCTAAGTTTCCTGTACTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGAGTCACCCATTAGGTTATAAATGCGCTAAGTTTCCTGTACTGC  500

seq1  GCCACTTAGCACATGAATACAGAAGGTGAGGCATATATTCTTTTATTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTAGCACATGAATACAGAAGGTGAGGCATATATTCTTTTATTCTT  550

seq1  AATATAGAGAAGATAATATAGTCATAAAATTTCTTACAGACAAAAAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAGAAGATAATATAGTCATAAAATTTCTTACAGACAAAAAGGAA  600

seq1  CATTTTGGGGAGCTCTAGAACTGCAGAAATACTTCATATGAATGGCATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGGGAGCTCTAGAACTGCAGAAATACTTCATATGAATGGCATAA  650

seq1  GGAAATAGGGTATTGAGGGGTGCTTTCTCACAACTTTCAGTTAATCTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGGGTATTGAGGGGTGCTTTCTCACAACTTTCAGTTAATCTATA  700

seq1  CAGCTGTCACTTGGTTAATAAATCATGTTTTTAAGATAGTTTTGAGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCACTTGGTTAATAAATCATGTTTTTAAGATAGTTTTGAGCATC  750

seq1  TTGCCTTGAATTATGTTAGCTTTTATATTTTAAAAGTTCTGTACCTCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGAATTATGTTAGCTTTTATATTTTAAAAGTTCTGTACCTCCTA  800

seq1  ATTATTTTATTTATATTAAAATATAAAATCAATATTACACATGGGCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTATTTATATTAAAATATAAAATCAATATTACACATGGGCACAC  850

seq1  ATTAG-AAGGAACAATGGTAAACATCTTTAAATTGCTTCCATGGCATTAA  899
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAAGGAACAATGGTAAACATCTTTAAATTGCTTCCATGGCATTAA  900

seq1  TAAGAATCTCCAGAAAGTGCACTGTGGTTTAAAA-TTAATGGTATCATAC  948
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAAGAATCTCCAGAAAGTGCACTGTGGTTTAAAATTTAATGGTATCATAC  950

seq1  AAAAGTATGTCATATAAATAGTCTCAGAAGCCTCAGTTTCTATTTCTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATGTCATATAAATAGTCTCAGAAGCCTCAGTTTCTATTTCTTTC  1000

seq1  TTTTTTTTTTTTTTTTTTTGGTTTTCTGAGA  1029
           ||||||||||||| | ||||||||||
seq2  -----TTTTTTTTTTTTTGGTTTTTCTGAGA  1026

seq1: chr1_66371492_66372649
seq2: B6Ng01-283G06.g_65_1208 (reverse)

seq1  ACCTGAGCTACATTTCCAATCCCTAGTTAGTAGTATAAGATAAATTATTT  50
      ||||||||||| |   ||   ||||| |||||||||||||| ||||||| 
seq2  ACCTGAGCTACCT---CA--TCCTAG-TAGTAGTATAAGAT-AATTATT-  42

seq1  TGGCA-GAAAGGTAGAACTATGTGTGAAAATTTCTTAAGATTATGGATGG  99
        ||| ||||||||| ||||||||||||||||||||| || |||| ||| 
seq2  --GCAGGAAAGGTAG-ACTATGTGTGAAAATTTCTTAGGA-TATGAATG-  87

seq1  AAAATAATTTTTCTGAATATTAGTTAAAGAGGAAATTTTTTTCAGTTTCA  149
       |||||||||||||| ||||||| |||||||| |||||||||||||||||
seq2  -AAATAATTTTTCTG-ATATTAG-TAAAGAGG-AATTTTTTTCAGTTTCA  133

seq1  CCAGAAGGAGACAAAAAGGCAAACTGCAGCCTGGGTTTTGCTTATGGGCA  199
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCAGAAGGAGACAAAAAGGCAAACTGCAGCCT-GGTTTTGCTTATGGGCA  182

seq1  CCT--CCCACACAGTATTCCAGGCTCCACTCTGCTGACTACACTTCAGGT  247
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCACACAGTATTCCAGGCTCCACTCTGCTGACTACACTTCAGGT  232

seq1  CTCCTG-CCAAGCTTCTGCAGTAGCAGAGGGCAGAGGACTTGATCTCTTG  296
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCCAAGCTTCTGCAGTAGCAGAGGGCAGAGGACTTGATCTCTTG  282

seq1  ATTTCTCTGCAAATGCCATGCTATAAATGATCTCATATGAGCAAAAGAAC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGCAAATGCCATGCTATAAATGATCTCATATGAGCAAAAGAAC  332

seq1  AGTGAAGACTAGATTCTATAAGCAGGAGTGATGGCTCCCCTGTAATCCCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGACTAGATTCTATAAGCAGGAGTGATGGCTCCCCTGTAATCCCA  382

seq1  GAATCCAGGTAGCTAAGGCAGGAGGATTGCCAGTTCCAGTCCATAGTGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAGGTAGCTAAGGCAGGAGGATTGCCAGTTCCAGTCCATAGTGTG  432

seq1  TCTAGGACAATAGTTCCTGGTTTGAAAAGCAAAAATAAAAAAGGATGAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGACAATAGTTCCTGGTTTGAAAAGCAAAAATAAAAAAGGATGAGA  482

seq1  GTACAGGGAATTAGGTTCTCTATAGCCAAAGACTTTGTAAAGAAACTTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGAATTAGGTTCTCTATAGCCAAAGACTTTGTAAAGAAACTTTT  532

seq1  AGAACCATAATAATTGTGGAGAATGTAATTTATTATCACTTGCTTTTGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATAATAATTGTGGAGAATGTAATTTATTATCACTTGCTTTTGTT  582

seq1  CATTAGAACTATAACTTGCTATTATTAACTATCTGCCTGACATTATCTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAACTATAACTTGCTATTATTAACTATCTGCCTGACATTATCTTA  632

seq1  AGCTCTTAGCATGTAATATCTCATTTAACTCTCTCTGTAATCCTTAGACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTAGCATGTAATATCTCATTTAACTCTCTCTGTAATCCTTAGACA  682

seq1  TAGTCTCCATTTTATAGATGACTGAACTGAGGCTCCAACAGTATAATTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCCATTTTATAGATGACTGAACTGAGGCTCCAACAGTATAATTTC  732

seq1  TGAGTCTGCCCTGAAGCCCTCATAGACATTCATAAAGATGAAATGTTTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTGCCCTGAAGCCCTCATAGACATTCATAAAGATGAAATGTTTCT  782

seq1  AGAAGATTTTTATACACAGTTATTTTCTTAATACCTTATTTATATGTATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTTTTATACACAGTTATTTTCTTAATACCTTATTTATATGTATA  832

seq1  ATGGAAGGCTACTATATTATCAAACAATAGGCTTTACAGATTTTCATTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGCTACTATATTATCAAACAATAGGCTTTACAGATTTTCATTTA  882

seq1  CATGTAATAGAAATATGTGTCCAATAATTACATCATTCAAGTTCTTATAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATAGAAATATGTGTCCAATAATTACATCATTCAAGTTCTTATAT  932

seq1  ATTAAATGTATATATATATATATATATATATATATATAATACTCATGTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGTATATATATATATATATATATATATATATAATACTCATGTTT  982

seq1  TCATGTATTTTATATAATATATTTAATTAGGAGCATTTACTTTCAAGAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTATTTTATATAATATATTTAATTAGGAGCATTTACTTTCAAGAAA  1032

seq1  GCTGACAGATCAACTCAGAGGTTTTTAGATGAATTAATACAGCATTTTTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAGATCAACTCAGAGGTTTTTAGATGAATTAATACAGCATTTTTC  1082

seq1  TTACCTTTATCATGGAGTTTTATAATTGGTTGAGTGATCTATATGTGAAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTATCATGGAGTTTTATAATTGGTTGAGTGATCTATATGTGAAC  1132

seq1  ATTAGAGAATTC  1158
      ||||||||||||
seq2  ATTAGAGAATTC  1144

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information