BAC Information

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BAC

Clone NameB6Ng01-283H07
Chromosome1 (Build37)
Map Location 148,338,608 - 148,476,997
singlet/doubletdoublet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283H07.bB6Ng01-283H07.g
ACCGA082412GA082413
length1,1361,121
definitionB6Ng01-283H07.b B6Ng01-283H07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,475,845 - 148,476,997)(148,338,608 - 148,339,737)
sequence
gaattcagaaggaaaatttggacagtacttaaatcaggatggaaagagaa
acgcagtggaccataacttaagaaagaccgcaaaacattgctaacaggaa
ggttcatcaaaatgagtatctatatgggtaaatgtagtactgtctaatga
gcaacctgatgatgcatcttttggaactagaaaggaaaggaaatattaaa
attagtatggaaaaatagattattaatgccagggaaattcagattgtgaa
acacagtaaaaagataaaataaaacatcgattctttgaaaagttaagttc
aatggaaatttgtcagctagcctaattaaaaatgattatgagttttgatc
attatgacaattttttagtttaagtaataaatgtttaattaaagaatttt
atatattattaacagcattcatttggccaaatatctacaggtctgtagaa
tcctactgtatataaagtgggaaatatatcaagtatagactatgaaagtg
caaatagcaagtcaaggttagattaaatttttttacactataaaattaac
ttgtttacaaaataggctttgccaatttattattttgaattagaaagtcg
atgactgtgattttttaaaaaaatatgtaccaaagaaatacaaactggat
agccatagtttttcccactcagtaacccagcccatcataatagacactgc
ataaggtaagggagtaggagtccagcactcatggatctccacccctcctc
tccatacactccctccacaggaacccctcctatccactgggcacaccctc
tcctaatcatggatgtgcaagatgttaattagtgatgttaatgatgatga
tgatgacaggaagatgacaacgagtcaatgactatgatcttaacgttgaa
agtgattaagagaactataaaaaggataaaattatagtagccataaatat
atcacagcagaaaatttcatggtgataaaatgaaaaaaaatggacagatt
tttgacacacataatctataaagtcaggagagacagtacaaacagtgagt
tgagcagaataataacaccacagataggccaagaatagaatattcactac
tgtgcttaaccacctttcaaagactgactgatatat

gaattcacagtagctgaaaagcccagaagatgcatctcgggtcccctaga
ttactccgtggcatatgctgataataaccaagtcacctttagttcttaac
ttcttcattagtgtgagagaacagaataaattatctttataaacgggcta
gtaccaatttttttttacttgagattcaatacacttaatcagtttattta
acagcatcttgatcttataaattaaatgtgaaaattactataaacagagg
tactaaagcaacttcgaatactttcgatgtgaaagctctgaagacaaagt
aaacagcaaggagactaaagtaagtaaacttcaatattgtagtgaggaca
aatatgcatgcataaatttgtgtcaaatttcatctgtaagtaataatata
tattcatatttacatatccagttcatatacatatataaaattttccttaa
tgggttcttaattttatattttcttataacttagatttaatattaaaaat
aacatgacatatagatactttctgtgtaagcaacctgcagcatgatttct
gtatttattttgaggacaatgttgagacagcacagcagggttaattctta
tcaccaagccccaaaagtgaggggtcaatcttggaaccctacatggtgga
aaaggtgattccccatgtgagcttctgcacacacacacacacacacacac
acacacacacacacacaaccaaataatataaaaagaatatgaatgtgttt
ctgttttttcagagggggctctgaatgaccaatccacagatccagctata
tgaagaaccttctctaattctacaatccatctctagcattaaatcatttg
aatgctgctgtggcagattttttttagtgaggtaatatgtgaaatatatt
tatttgtagctatgaaggaagatacgacagaaagcaagaacacccatcac
ttgcttgaaatccactaaatgagcaccttcagatgagcacctggatgaaa
gaagctaccctctcagctagaaccaaacatctacatcacagcatgtaaaa
aagaacattggctctggaaaaacagacagggacacaatgtctatggacct
tacatgcacgtatattgagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148475845_148476997
seq2: B6Ng01-283H07.b_30_1165 (reverse)

seq1  ATATATCAATGTCAGTCTTTTAAAAGGGTGGTTAAGCACAGTAGTGAAAT  50
      ||||||||  |||||||||| |||  |||||||||||||||||||| |||
seq2  ATATATCA--GTCAGTCTTTGAAA--GGTGGTTAAGCACAGTAGTG-AAT  45

seq1  ATTCTAATCTTTGGCTTATTCTTGTTGGGTGTTATTTATCTGCTTCAACC  100
      |||||| || ||||| |||   |||  |||||||||  ||||| |||| |
seq2  ATTCTATTC-TTGGCCTAT--CTGT--GGTGTTATTATTCTGC-TCAA-C  88

seq1  TCACTGTTTGTACTTGGTCTCTCCTGACTTTATAGATTATGTGTGTTCAA  150
      ||||||||||||||  ||||||||||||||||||||||||||||| ||||
seq2  TCACTGTTTGTACT--GTCTCTCCTGACTTTATAGATTATGTGTG-TCAA  135

seq1  AAATCTGTCCATTTTTTTTCATTTTATCACCATGAAATTTTTCTGCTGTG  200
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAATCTGTCCATTTTTTTTCATTTTATCACCATGAAA-TTTTCTGCTGTG  184

seq1  ATATATTTATGGCTACCTATAATTTTATCCTTTTTATAGTTCTCTTAATC  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATATATTTATGGCTA-CTATAATTTTATCCTTTTTATAGTTCTCTTAATC  233

seq1  ACTTTCAACGTTAAGATCATAGTCATTGACTCGTTGTCATCTTCCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAACGTTAAGATCATAGTCATTGACTCGTTGTCATCTTCCTGTCA  283

seq1  TCATCATCATCATTAACATCACTAATTAACATCTTGCACATCCATGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCATCATTAACATCACTAATTAACATCTTGCACATCCATGATTA  333

seq1  GGAGAGGGTGTGCCCAGTGGATAGGAGGGGTTCCTGTGGAGGGAGTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGTGTGCCCAGTGGATAGGAGGGGTTCCTGTGGAGGGAGTGTAT  383

seq1  GGAGAGGAGGGGTGGAGATCCATGAGTGCTGGACTCCTACTCCCTTACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAGGGGTGGAGATCCATGAGTGCTGGACTCCTACTCCCTTACCT  433

seq1  TATGCAGTGTCTATTATGATGGGCTGGGTTACTGAGTGGGAAAAACTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGTGTCTATTATGATGGGCTGGGTTACTGAGTGGGAAAAACTATG  483

seq1  GCTATCCAGTTTGTATTTCTTTGGTACATATTTTTTTAAAAAATCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCAGTTTGTATTTCTTTGGTACATATTTTTTTAAAAAATCACAGT  533

seq1  CATCGACTTTCTAATTCAAAATAATAAATTGGCAAAGCCTATTTTGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGACTTTCTAATTCAAAATAATAAATTGGCAAAGCCTATTTTGTAAA  583

seq1  CAAGTTAATTTTATAGTGTAAAAAAATTTAATCTAACCTTGACTTGCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAATTTTATAGTGTAAAAAAATTTAATCTAACCTTGACTTGCTAT  633

seq1  TTGCACTTTCATAGTCTATACTTGATATATTTCCCACTTTATATACAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTTTCATAGTCTATACTTGATATATTTCCCACTTTATATACAGTA  683

seq1  GGATTCTACAGACCTGTAGATATTTGGCCAAATGAATGCTGTTAATAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTACAGACCTGTAGATATTTGGCCAAATGAATGCTGTTAATAATA  733

seq1  TATAAAATTCTTTAATTAAACATTTATTACTTAAACTAAAAAATTGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTCTTTAATTAAACATTTATTACTTAAACTAAAAAATTGTCAT  783

seq1  AATGATCAAAACTCATAATCATTTTTAATTAGGCTAGCTGACAAATTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCAAAACTCATAATCATTTTTAATTAGGCTAGCTGACAAATTTCC  833

seq1  ATTGAACTTAACTTTTCAAAGAATCGATGTTTTATTTTATCTTTTTACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTTAACTTTTCAAAGAATCGATGTTTTATTTTATCTTTTTACTG  883

seq1  TGTTTCACAATCTGAATTTCCCTGGCATTAATAATCTATTTTTCCATACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCACAATCTGAATTTCCCTGGCATTAATAATCTATTTTTCCATACT  933

seq1  AATTTTAATATTTCCTTTCCTTTCTAGTTCCAAAAGATGCATCATCAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAATATTTCCTTTCCTTTCTAGTTCCAAAAGATGCATCATCAGGT  983

seq1  TGCTCATTAGACAGTACTACATTTACCCATATAGATACTCATTTTGATGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATTAGACAGTACTACATTTACCCATATAGATACTCATTTTGATGA  1033

seq1  ACCTTCCTGTTAGCAATGTTTTGCGGTCTTTCTTAAGTTATGGTCCACTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTGTTAGCAATGTTTTGCGGTCTTTCTTAAGTTATGGTCCACTG  1083

seq1  CGTTTCTCTTTCCATCCTGATTTAAGTACTGTCCAAATTTTCCTTCTGAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTCTTTCCATCCTGATTTAAGTACTGTCCAAATTTTCCTTCTGAA  1133

seq1  TTC  1153
      |||
seq2  TTC  1136


seq1: chr1_148338608_148339737
seq2: B6Ng01-283H07.g_62_1182

seq1  GAATTCACAGTAGCTGAAAAGCCCAGAAGATGCATCTCGGGTCCCCTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTAGCTGAAAAGCCCAGAAGATGCATCTCGGGTCCCCTAGA  50

seq1  TTACTCCGTGGCATATGCTGATAATAACCAAGTCACCTTTAGTTCTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCGTGGCATATGCTGATAATAACCAAGTCACCTTTAGTTCTTAAC  100

seq1  TTCTTCATTAGTGTGAGAGAACAGAATAAATTATCTTTATAAACGGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTAGTGTGAGAGAACAGAATAAATTATCTTTATAAACGGGCTA  150

seq1  GTACCAATTTTTTTTTACTTGAGATTCAATACACTTAATCAGTTTATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAATTTTTTTTTACTTGAGATTCAATACACTTAATCAGTTTATTTA  200

seq1  ACAGCATCTTGATCTTATAAATTAAATGTGAAAATTACTATAAACAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCTTGATCTTATAAATTAAATGTGAAAATTACTATAAACAGAGG  250

seq1  TACTAAAGCAACTTCGAATACTTTCGATGTGAAAGCTCTGAAGACAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAGCAACTTCGAATACTTTCGATGTGAAAGCTCTGAAGACAAAGT  300

seq1  AAACAGCAAGGAGACTAAAGTAAGTAAACTTCAATATTGTAGTGAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCAAGGAGACTAAAGTAAGTAAACTTCAATATTGTAGTGAGGACA  350

seq1  AATATGCATGCATAAATTTGTGTCAAATTTCATCTGTAAGTAATAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGCATGCATAAATTTGTGTCAAATTTCATCTGTAAGTAATAATATA  400

seq1  TATTCATATTTACATATCCAGTTCATATACATATATAAAATTTTCCTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTTACATATCCAGTTCATATACATATATAAAATTTTCCTTAA  450

seq1  TGGGTTCTTAATTTTATATTTTCTTATAACTTAGATTTAATATTAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCTTAATTTTATATTTTCTTATAACTTAGATTTAATATTAAAAAT  500

seq1  AACATGACATATAGATACTTTCTGTGTAAGCAACCTGCAGCATGATTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGACATATAGATACTTTCTGTGTAAGCAACCTGCAGCATGATTTCT  550

seq1  GTATTTATTTTGAGGACAATGTTGAGACAGCACAGCAGGGTTAATTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATTTTGAGGACAATGTTGAGACAGCACAGCAGGGTTAATTCTTA  600

seq1  TCACCAAGCCCCAAAAGTGAGGGGTCAATCTTGGAACCCTACATGGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGCCCCAAAAGTGAGGGGTCAATCTTGGAACCCTACATGGTGGA  650

seq1  AAAGGTGATTCCCCATGTGAGCTTCTGCACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGATTCCCCATGTGAGCTTCTGCACACACACACACACACACACAC  700

seq1  ACACACACACACACACAACCAAATAATATAAAAAGAATATGAATGTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAACCAAATAATATAAAAAGAATATGAATGTGTTT  750

seq1  CTGTTTTTTCAGAGGGGGCTCTGAATGACCAATCCACAGATCCAGCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTCAGAGGGGGCTCTGAATGACCAATCCACAGATCCAGCTATA  800

seq1  TGAAGAACCTTCTCTAATTCTACAATCCATCTCTAGCATTAAATCATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACCTTCTCTAATTCTACAATCCATCTCTAGCATTAAATCATTTG  850

seq1  AATGCTGCTGTGGCAGA-TTTTTTTAGTGAGGTAATATGTGAAATATATT  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATGCTGCTGTGGCAGATTTTTTTTAGTGAGGTAATATGTGAAATATATT  900

seq1  TATTTGTAGCTATGAAGGAAGATACGACAAGAAGGCAAAGAACACCCATC  949
      |||||||||||||||||||||||||||| |||| || |||||||||||||
seq2  TATTTGTAGCTATGAAGGAAGATACGAC-AGAAAGC-AAGAACACCCATC  948

seq1  ACTTGCTTGAAATCCACTAAATGAGCACCTTCAGATGAGCACCCTGGAAT  999
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  ACTTGCTTGAAATCCACTAAATGAGCACCTTCAGATGAGCA-CCTGG-AT  996

seq1  GAAAGAAGCTACCCTCTCAGCTTAGAACCAAAACATCTTACATTCACAAG  1049
      ||||||||||||||||||||| ||||||| ||||||| |||| |||||  
seq2  GAAAGAAGCTACCCTCTCAGC-TAGAACC-AAACATC-TACA-TCACA--  1040

seq1  GCATTGTAAAAAAG-ACATTTGCTCT-GAAAACAAGACAGGGGACACAAT  1097
      ||| |||||||||| ||||| ||||| |||||  ||||| ||||||||||
seq2  GCA-TGTAAAAAAGAACATTGGCTCTGGAAAAACAGACA-GGGACACAAT  1088

seq1  GTCTAT-GACATTACATGAAGGTATATTTGAGTA  1130
      |||||| ||| ||||||| | ||||| |||||||
seq2  GTCTATGGACCTTACATGCACGTATA-TTGAGTA  1121


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