BAC Information

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BAC

Clone NameB6Ng01-283K08
Chromosome1 (Build37)
Map Location 161,465,428 - 161,466,435
singlet/doubletsinglet
Overlap geneTnr
Upstream geneAstn1, Pappa2, 4930562F17Rik, EG240853, LOC664972, Rfwd2, EG620484
Downstream gene4930523C07Rik, 4930562F07Rik, Tnn, Mrps14, Cacybp, Rabgap1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283K08.b
ACCGA082554
length1,009
definitionB6Ng01-283K08.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatcaggctccagtacctcttgtgtgtgaatacaaactagtct
gcacaattgcctttgagtgcagtgttattatacttcctgttttataggag
gaaaacagaggcacccagtctctgattttcctgaagatcacacaaataga
agaacctgtatttgagcccatgctcttccttagctcttattgactatgct
gcctctgtttcacttgggaacacggtagcattccctggttcttgagtgat
acaggaagctgaagagtcagttcttgcaaaaggtttgttgaaaggaagac
catagcagctgtgctttctctggggctctgagcagcaatcatcacaactc
ttgacctttgtggattttttttttaaacaaatcaccacctaactccagga
gatgaggaaatctctgctttatgcagcctcacaggaatgcggttcttatc
cagtgacaaagcctcccccaccttgtggcttagccccctggggatcatct
gggacactttgtaactagccctttgtgtgtggaatgcttctttcaactct
gaaatgacattgtgcaggacgagattctcacagtgtattcccaaatgact
gatgcagcttagggatgggggagggggagctgtgacagatgccactttac
ccagtttgttccttttgacgttattattcgagtaccagtggtagccagga
ccctccagaaagctaaggggaagacaggtagtgctgtctggggtacaaag
cagcttaatggcaatgtggccatgtccctgccctgtgacaacagcaggga
atgggacaaagaggtaggtagattgtttcatgcttcttagtcacctacca
tgtgtcagacacagtggaaatggagcctcaaagcagactcatcccagagg
agacacacttgaagatagggctagccctgagacttggttatttagttctt
atattaggtactgggtggaactttggggagagatttatcacagtcacggt
gagaaaatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_161465428_161466435
seq2: B6Ng01-283K08.b_43_1051

seq1  GAATTCCCATCAGGCTCCAGTACCTCTTGTGTGTGAATACAAACTAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCAGGCTCCAGTACCTCTTGTGTGTGAATACAAACTAGTCT  50

seq1  GCACAATTGCCTTTGAGTGCAGTGTTATTATACTTCCTGTTTTATAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATTGCCTTTGAGTGCAGTGTTATTATACTTCCTGTTTTATAGGAG  100

seq1  GAAAACAGAGGCACCCAGTCTCTGATTTTCCTGAAGATCACACAAATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGAGGCACCCAGTCTCTGATTTTCCTGAAGATCACACAAATAGA  150

seq1  AGAACCTGTATTTGAGCCCATGCTCTTCCTTAGCTCTTATTGACTATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGTATTTGAGCCCATGCTCTTCCTTAGCTCTTATTGACTATGCT  200

seq1  GCCTCTGTTTCACTTGGGAACACGGTAGCATTCCCTGGTTCTTGAGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTTTCACTTGGGAACACGGTAGCATTCCCTGGTTCTTGAGTGAT  250

seq1  ACAGGAAGCTGAAGAGTCAGTTCTTGCAAAAGGTTTGTTGAAAGGAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGCTGAAGAGTCAGTTCTTGCAAAAGGTTTGTTGAAAGGAAGAC  300

seq1  CATAGCAGCTGTGCTTTCTCTGGGGCTCTGAGCAGCAATCATCACAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGCTGTGCTTTCTCTGGGGCTCTGAGCAGCAATCATCACAACTC  350

seq1  TTGACCTTTGTGGATTTTTTTTTTAAACAAATCACCACCTAACTCCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTTGTGGATTTTTTTTTTAAACAAATCACCACCTAACTCCAGGA  400

seq1  GATGAGGAAATCTCTGCTTTATGCAGCCTCACAGGAATGCGGTTCTTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGAAATCTCTGCTTTATGCAGCCTCACAGGAATGCGGTTCTTATC  450

seq1  CAGTGACAAAGCCTCCCCCACCTTGTGGCTTAGCCCCCTGGGGATCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACAAAGCCTCCCCCACCTTGTGGCTTAGCCCCCTGGGGATCATCT  500

seq1  GGGACACTTTGTAACTAGCCCTTTGTGTGTGGAATGCTTCTTTCAACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACTTTGTAACTAGCCCTTTGTGTGTGGAATGCTTCTTTCAACTCT  550

seq1  GAAATGACATTGTGCAGGACGAGATTCTCACAGTGTATTCCCAAATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGACATTGTGCAGGACGAGATTCTCACAGTGTATTCCCAAATGACT  600

seq1  GATGCAGCTTAGGGATGGGGGAGGGGGAGCTGTGACAGATGCCACTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGCTTAGGGATGGGGGAGGGGGAGCTGTGACAGATGCCACTTTAC  650

seq1  CCAGTTTGTTCCTTTTGACGTTATTATTCGAGTACCAGTGGTAGCCAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTGTTCCTTTTGACGTTATTATTCGAGTACCAGTGGTAGCCAGGA  700

seq1  CCCTCCAGAAAGCTAAGGGGAAGACAGGTAGTGCTGTCTGGGGTACAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCAGAAAGCTAAGGGGAAGACAGGTAGTGCTGTCTGGGGTACAAAG  750

seq1  CAGCTTAATGGCAATGTGGCCATGTCCCTGCCCTGTGACAACAGCAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAATGGCAATGTGGCCATGTCCCTGCCCTGTGACAACAGCAGGGA  800

seq1  ATGGGACAAAGAGGTAGGTAGATTGTTTCATGCTTCTTAGTCACCTACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACAAAGAGGTAGGTAGATTGTTTCATGCTTCTTAGTCACCTACCA  850

seq1  TGTGTCAGACACAGTGGAAATGGAGCC-CAAAGCAGACTCATCCCAGAGG  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGTGTCAGACACAGTGGAAATGGAGCCTCAAAGCAGACTCATCCCAGAGG  900

seq1  AGACACACTTGAAGATAGGGCTAG-CCTGAGACT--GGTATTTAGTTCTT  946
      |||||||||||||||||||||||| |||||||||  | ||||||||||||
seq2  AGACACACTTGAAGATAGGGCTAGCCCTGAGACTTGGTTATTTAGTTCTT  950

seq1  ATATTAGGTACTGGGTGGAAACTTTTGGGGAGAGATTTATCACAAGTCAA  996
      ||||||||||||||||||||   |||||||||||||||||||| ||||| 
seq2  ATATTAGGTACTGGGTGGAA--CTTTGGGGAGAGATTTATCAC-AGTCAC  997

seq1  GGTGAGAAAATT  1008
      ||||||||||||
seq2  GGTGAGAAAATT  1009


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