BAC Information

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BAC

Clone NameB6Ng01-283P15
Chromosome1 (Build37)
Map Location 12,381,952 - 12,485,507
singlet/doubletdoublet
Overlap genenone
Upstream geneA830018L16Rik, LOC665262
Downstream geneLOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2, LOC665341, LOC100039812
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P15.bB6Ng01-283P15.g
ACCGA082796GA082797
length1,1851,094
definitionB6Ng01-283P15.b B6Ng01-283P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,484,338 - 12,485,507)(12,381,952 - 12,383,046)
sequence
gaattcatgaaaactttagtggttccattgaaaatgcaatggcgaccgtc
ataacatcttcccttgtgacctaaagggtcacttctcatgagtcattgta
cagttaccatggagactatgcaattaaacaaactcttttatggtacagtc
tgtgagatctgaagcattcaatcataacttttaaactgtcacataggttc
catgaatggaagttaaatgaccttttatttcttttgagaaattgcacagt
aaaggttatacagaattagaattataaaaattagcagcgtttgtattcta
ttgggacacatctttatagaaaagagaattttcagatggcttaataggtc
ttctgtccctcacaatcctacatgatcatttctagcaggtaacagaccat
ctctctgaagagtctcagcctgtcctccagcaagcacatctgaatgtaaa
gttttacttggtaagccctttgttcctgtggctggcacagcacatgacac
agccaacttggagtttcctcacatgtctgagtctcttttaaatatatatt
gtttcctcaggcttctccctaaagaattttagtcaggactcctgactggt
tcatccccttgctgaaaacacagtaaactgtatttaagccaattagaggt
catctccatgtctttacccttgtttcaccaatgggatatgctgtgctgac
tcactcgccatattgtagtactgtctggtgccatgctacttttcttgaat
gtcttattgtattattaaagttgctggtagatccactctaaaatcttttt
ttttactatcctaccaccctactgaaataacattctactggaggtaattt
tccacctattcacagacatttgatagtatctagagacagttttggttatc
taattgatatcagatatggagtggtggcatgtgcttataaccccaggtct
taggaggcaaaggttgtagatcatgagttcaaagcaaggcctggagatac
ttagtggagtggtaaggtcaatccactacatctaagaaaagtggtgtgaa
taggtggatactcatgacatctggatggggtggatgctaggaacgttttt
ggatccttctatatttccattggagcagcagctcaaaaaagaaatttaat
gtgctcgaaagtccaggctatcttaagttggaaaa

gaattcatcactggatcaaaaggcagcaaatggtggtttgcttagcagca
aacattctgtaagtccatactgaaatatgaacactatggaaacatgtggg
agatagattagtggctacagaggagcagcatgatgatagagcatcatctg
gtagaaaacgagcaagttgccagcccttcatatatagtgttactgtgtct
catctctggagagagtcaattaatagtctggataaactggactgtaaagt
gtgggacagcagaattaaagtgaccagtaattttaaaaataaagaaaaga
aaaaacaagatcagtgaaatttctcaaccagtaaacgtacttgctgccaa
gtctgacaatcccaaggacccacatgcccacagttgttctctgacctcca
tacttccacacacatacacaatacatgtactcacacagagttagtagata
aagttttaaaaaaataaatgaagtagcccaaacataagacagagactgag
attgagccaaattctggaaacaacgtaaatgcttataaatcatccgcata
cctctaacataatactggtgaattaggattaccaccagtagtgtgatcct
tttgtctctgaaaggcctagtcagattatagtagaatcactccagaaatg
tcagaaaatgagccatttctcattaaaattatatgaaaagcctgtgaggc
caaagggtttccatcaactgaaactgatctcatgcctatataccccaaga
tacaagttagagttgtctctgagaagaatagaacattgaaacatagccag
ttatgttagtatattttcaagccattacattttaagaattgttagatgac
attcaaaatagtattgtgtctgccaaaaaataaaaggctttatcaactga
gaaatgaccttcccaggacccctgcttccatctatagctttgtgtactaa
ttttcaaaaagacagtttacttttgtaaaacatgtatttcttcataatat
atacaacagggttttcaactgaaattaacatgcgtattattctaatgtac
attctgtacctggtgtagtcatggagactttacactgaacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12484338_12485507
seq2: B6Ng01-283P15.b_45_1229 (reverse)

seq1  TTTTTCAACTTTAGATAGCTTGACTTTTGGGGCACAT---AATTCTTTTT  47
      |||| |||||| ||||||| ||   ||| | ||||||   | ||||||||
seq2  TTTTCCAACTTAAGATAGCCTGGACTTTCGAGCACATTAAATTTCTTTTT  50

seq1  TGAGCTGCTGCT-CAAT-GAATTATAGAAGGATC--AAAACGTTCTTAGC  93
      |||||||||||| |||| ||| ||||||||||||  ||||||||| ||||
seq2  TGAGCTGCTGCTCCAATGGAAATATAGAAGGATCCAAAAACGTTCCTAGC  100

seq1  ATCCA-CCCAT-CAGATGTCATGAGTAT-CACCTATTCACACCAC-TTTC  139
      ||||| ||||| |||||||||||||||| |||||||||||||||| ||||
seq2  ATCCACCCCATCCAGATGTCATGAGTATCCACCTATTCACACCACTTTTC  150

seq1  TTAGATGTAGTTGGATTGACCTTA-CACT-CACTAAGTATCT-CAGG-CT  185
      |||||||||| ||||||||||||| |||| |||||||||||| |||| ||
seq2  TTAGATGTAG-TGGATTGACCTTACCACTCCACTAAGTATCTCCAGGCCT  199

seq1  TGCTTTGAACTCATGATCTACAACCTTTGCCTCCTAAGACCTGGGGTTAT  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAACTCATGATCTACAACCTTTGCCTCCTAAGACCTGGGGTTAT  249

seq1  AAGCACATGCCACCACTCCATATCTGATATCAATTAGATAACCAAAACTG  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATGCCACCACTCCATATCTGATATCAATTAGATAACCAAAACTG  299

seq1  TCTCTAGATACTATCAAATGTCTGTGAATAGGTGGAAAATTACCTCCAGT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGATACTATCAAATGTCTGTGAATAGGTGGAAAATTACCTCCAGT  349

seq1  AGAATGTTATTTCAGTAGGGTGGTAGGATAGT-AAAAAAAAGATTTTAGA  384
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAATGTTATTTCAGTAGGGTGGTAGGATAGTAAAAAAAAAGATTTTAGA  399

seq1  GTGGATCTACCAGCAACTTTAATAATACAATAAGACATTCAAGAAAAGTA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCTACCAGCAACTTTAATAATACAATAAGACATTCAAGAAAAGTA  449

seq1  GCATGGCACCAGACAGTACTACAATATGGCGAGTGAGTCAGCACAGCATA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCACCAGACAGTACTACAATATGGCGAGTGAGTCAGCACAGCATA  499

seq1  TCCCATTGGTGAAACAAGGGTAAAGACATGGAGATGACCTCTAATTGGCT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGGTGAAACAAGGGTAAAGACATGGAGATGACCTCTAATTGGCT  549

seq1  TAAATACAGTTTACTGTGTTTTCAGCAAGGGGATGAACCAGTCAGGAGTC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACAGTTTACTGTGTTTTCAGCAAGGGGATGAACCAGTCAGGAGTC  599

seq1  CTGACTAAAATTCTTTAGGGAGAAGCCTGAGGAAACAATATATATTTAAA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAAAATTCTTTAGGGAGAAGCCTGAGGAAACAATATATATTTAAA  649

seq1  AGAGACTCAGACATGTGAGGAAACTCCAAGTTGGCTGTGTCATGTGCTGT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCAGACATGTGAGGAAACTCCAAGTTGGCTGTGTCATGTGCTGT  699

seq1  GCCAGCCACAGGAACAAAGGGCTTACCAAGTAAAACTTTACATTCAGATG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCACAGGAACAAAGGGCTTACCAAGTAAAACTTTACATTCAGATG  749

seq1  TGCTTGCTGGAGGACAGGCTGAGACTCTTCAGAGAGATGGTCTGTTACCT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCTGGAGGACAGGCTGAGACTCTTCAGAGAGATGGTCTGTTACCT  799

seq1  GCTAGAAATGATCATGTAGGATTGTGAGGGACAGAAGACCTATTAAGCCA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAATGATCATGTAGGATTGTGAGGGACAGAAGACCTATTAAGCCA  849

seq1  TCTGAAAATTCTCTTTTCTATAAAGATGTGTCCCAATAGAATACAAACGC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATTCTCTTTTCTATAAAGATGTGTCCCAATAGAATACAAACGC  899

seq1  TGCTAATTTTTATAATTCTAATTCTGTATAACCTTTACTGTGCAATTTCT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATTTTTATAATTCTAATTCTGTATAACCTTTACTGTGCAATTTCT  949

seq1  CAAAAGAAATAAAAGGTCATTTAACTTCCATTCATGGAACCTATGTGACA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAATAAAAGGTCATTTAACTTCCATTCATGGAACCTATGTGACA  999

seq1  GTTTAAAAGTTATGATTGAATGCTTCAGATCTCACAGACTGTACCATAAA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAGTTATGATTGAATGCTTCAGATCTCACAGACTGTACCATAAA  1049

seq1  AGAGTTTGTTTAATTGCATAGTCTCCATGGTAACTGTACAATGACTCATG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGTTTAATTGCATAGTCTCCATGGTAACTGTACAATGACTCATG  1099

seq1  AGAAGTGACCCTTTAGGTCACAAGGGAAGATGTTATGACGGTCGCCATTG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGACCCTTTAGGTCACAAGGGAAGATGTTATGACGGTCGCCATTG  1149

seq1  CATTTTCAATGGAACCACTAAAGTTTTCATGAATTC  1170
      ||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAATGGAACCACTAAAGTTTTCATGAATTC  1185


seq1: chr1_12381952_12383046
seq2: B6Ng01-283P15.g_65_1158

seq1  GAATTCATCACTGGATCAAAAGGCAGCAAATGGTGGTTTGCTTAGCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACTGGATCAAAAGGCAGCAAATGGTGGTTTGCTTAGCAGCA  50

seq1  AACATTCTGTAAGTCCATACTGAAATATGAACACTATGGAAACATGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTGTAAGTCCATACTGAAATATGAACACTATGGAAACATGTGGG  100

seq1  AGATAGATTAGTGGCTACAGAGGAGCAGCATGATGATAGAGCATCATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATTAGTGGCTACAGAGGAGCAGCATGATGATAGAGCATCATCTG  150

seq1  GTAGAAAACGAGCAAGTTGCCAGCCCTTCATATATAGTGTTACTGTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAACGAGCAAGTTGCCAGCCCTTCATATATAGTGTTACTGTGTCT  200

seq1  CATCTCTGGAGAGAGTCAATTAATAGTCTGGATAAACTGGACTGTAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGGAGAGAGTCAATTAATAGTCTGGATAAACTGGACTGTAAAGT  250

seq1  GTGGGACAGCAGAATTAAAGTGACCAGTAATTTTAAAAATAAAGAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACAGCAGAATTAAAGTGACCAGTAATTTTAAAAATAAAGAAAAGA  300

seq1  AAAAACAAGATCAGTGAAATTTCTCAACCAGTAAACGTACTTGCTGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAGATCAGTGAAATTTCTCAACCAGTAAACGTACTTGCTGCCAA  350

seq1  GTCTGACAATCCCAAGGACCCACATGCCCACAGTTGTTCTCTGACCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACAATCCCAAGGACCCACATGCCCACAGTTGTTCTCTGACCTCCA  400

seq1  TACTTCCACACACATACACAATACATGTACTCACACAGAGTTAGTAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCACACACATACACAATACATGTACTCACACAGAGTTAGTAGATA  450

seq1  AAGTTTTAAAAAAATAAATGAAGTAGCCCAAACATAAGACAGAGACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTAAAAAAATAAATGAAGTAGCCCAAACATAAGACAGAGACTGAG  500

seq1  ATTGAGCCAAATTCTGGAAACAACGTAAATGCTTATAAATCATCCGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCCAAATTCTGGAAACAACGTAAATGCTTATAAATCATCCGCATA  550

seq1  CCTCTAACATAATACTGGTGAATTAGGATTACCACCAGTAGTGTGATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAACATAATACTGGTGAATTAGGATTACCACCAGTAGTGTGATCCT  600

seq1  TTTGTCTCTGAAAGGCCTAGTCAGATTATAGTAGAATCACTCCAGAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCTGAAAGGCCTAGTCAGATTATAGTAGAATCACTCCAGAAATG  650

seq1  TCAGAAAATGAGCCATTTCTCATTAAAATTATATGAAAAGCCTGTGAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAATGAGCCATTTCTCATTAAAATTATATGAAAAGCCTGTGAGGC  700

seq1  CAAAGGGTTTCCATCAACTGAAACTGATCTCATGCCTATATACCCCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGTTTCCATCAACTGAAACTGATCTCATGCCTATATACCCCAAGA  750

seq1  TACAAGTTAGAGTTGTCTCTGAGAAGAATAGAACATTGAAACATAGCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTTAGAGTTGTCTCTGAGAAGAATAGAACATTGAAACATAGCCAG  800

seq1  TTATGTTAGTATATTTTCAAGCCATTACATTTTAAGAATTGTTAGATGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTAGTATATTTTCAAGCCATTACATTTTAAGAATTGTTAGATGAC  850

seq1  ATTCAAAATAGTATTGTGTCTGCCAAAAAATAAAAGGCTTTATCAACTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATAGTATTGTGTCTGCCAAAAAATAAAAGGCTTTATCAACTGA  900

seq1  GAAATGACCTTCCCAGGACCCCTGCTTCCATCTATAGCTTTGTGTACTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGACCTTCCCAGGACCCCTGCTTCCATCTATAGCTTTGTGTACTAA  950

seq1  TTTTCAAAAAGACAGTTTACTTTTGTAAAACATGTA-TTCTCCATAATAT  999
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TTTTCAAAAAGACAGTTTACTTTTGTAAAACATGTATTTCTTCATAATAT  1000

seq1  ATAACACAGGGTTTTCAACTGAAATTTAACATGCGTATATCTTAAATGTA  1049
      |||  ||||||||||||||||||| |||||||||||||   |  ||||||
seq2  ATACAACAGGGTTTTCAACTGAAA-TTAACATGCGTATTATTCTAATGTA  1049

seq1  CATTCTGTAACT-GTGTAGTTCAT-GAGACCTTTACAACTGAACACAC  1095
      ||||||||| || |||||| |||| |||| |||||| |||||||||||
seq2  CATTCTGTACCTGGTGTAG-TCATGGAGA-CTTTAC-ACTGAACACAC  1094


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