BAC Information

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BAC

Clone NameB6Ng01-283P21
Chromosome1 (Build37)
Map Location 166,779,143 - 166,779,782
singlet/doubletsinglet
Overlap genenone
Upstream geneKifap3, Scyl3, BC055324, 2810422O20Rik, Sele, Sell, Selp, F5, Slc19a2, 4930455F23Rik, Blzf1, Nme7, Atp1b1, LOC100040065, Dpt
Downstream geneXcl1, 1700029M03Rik, Tbx19, Sft2d2, Tiprl, Gpr161, Iqwd1, Brp44, Sacy, Ppia-ps1-1625, Mpzl1, Rcsd1, Creg1, Cd247
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P21.bB6Ng01-283P21.g
ACCGA082808GA082809
length1,1281,154
definitionB6Ng01-283P21.b B6Ng01-283P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctatgatggactgatgaaccagaaaacaagtttcctgcttct
aaaacacacaggtaaaacatacatgttttcatcccagaagggagaaaaat
agaaggaattaaggagcctctggtctcacacacattcaagactaagcaag
aaaaaaaatccctttgggtttcagggtctgtgagcgctcttctttggctc
tcagatccatccgctggctcacagctcctgtgcctgtgttctcagtagct
gctttatcatccttagccctggttccatggctctatccagtgagtcactc
ctgttcctgaaggctggcgcatgtgtgcagctgcataatttatcatttcg
cttcctgcctatataattaagagaatccgaaaatacctttttattttgtc
catcctctgttcaatctcagactgaaatgtttctcgggtataataatcct
ccaagagagcataggctgtctgtgtacaccaaggggagtcactcagacag
acaatagtttcccatatattctctgataggacagcccttcactatttctg
gctgcttccaacatgagggagtgtatccatgagttgaatgcctaatcttt
ccaaagactgtcctcatgtgcccttggccgtctctccagagtacatttgc
ttaacagtgcatttcttcttttcagcattctttgcaatctggataacatg
aaaatctcttaaatcatcaaaggctaatccttaagagtttcttctttact
ctcttctgcctctcttgctttctctacctagtaaagagaaactagacggt
cctttccacactttgcttgaaaatcttttctgcaagatgtccaacttcat
catttgtagcttccacctagcaagacatgctttagccaagttttttatta
ctttaataaaaaaatgcctttctgtactttccaatatgacttcatttgtt
tctgggacctgacctaagattccctttgcatttctagctcttcagacagt
attggaatattttctttgtcctttaagttttcacaattctttgagaattt
ctttttttctttttttaatgggtatttatttcattacattcatgctatcc
taaaaggtccccacattgcttcctcacc
gaattctggatgaaattcaagacagtctatcagaggtagagcggggagag
agattaggaacaaaatggacacatggtgcaccaattaagcatacaggcct
ttccacggaccttgagcccaaggaaaagataatgtcaggaaagaataccc
agggtgagtttggaaggaaggagaaggaaaaagagaagaagaaagatcaa
tcagtggaggtccctaggagaaggaacctatacccgccactagatgagtt
taaggacctagctcttagtagctcagaatcagatgagggacttagcccct
ctgaggaaacggacttggaggaggaagcagctcgttatgagggagaaagg
taccagccagataaaatgcgagctaatcagtccagaaaaaggcaaaaagc
ggctgtcgaaagccagcttgctgctcagcctccggactgtcggcttcagg
gtcctagtgcacctctgtcttatgtggagaggtatcattcagactcattc
attccaaaagaggaacagaggaaaatgcaaaaggcatttccagtttttga
aggagccgagggagggtgagttcacactccggtggagtatatacagatta
aggagcttgctgagtctgtccgtaactatggagtcagtgccaatttcact
ataggacaagtcgaaaggcttgcggctttggcaatgactcctggagattg
gacaacagtggtgaaagctgtggttccaaatatggggatgtatcttgagt
ggaaagcattatggcaggatttctgccagacgcaggcaagggctaatacc
accatggaaggggaccaaagaacgcggacttttgaattacttacaggtca
ggacagcacgctgctaaccagacatattatcattggggagcgtacgctca
gatctcaggtgccactgttaaggcatgggaaagcactctctaggaagggg
gatgcgaatggacattgacagatacccaggcgcacagagtcatctcagat
ttgtggccaggatcacggagcagcagagaatatttggagaactcagaggc
cagctatgcctttattgaccagtggcttatgacagcctaccagaatgtag
atcagcatcaaccttacatgagtatggctaccaggaacgtgtctaaggtg
tgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_166779143_166779782
seq2: B6Ng01-283P21.b_542_1175

seq1  AGACAGACAATAGTTTCCCATATATTCTCTGATAGGACAGCCCTTCACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACAATAGTTTCCCATATATTCTCTGATAGGACAGCCCTTCACTA  50

seq1  TTTCTGGCTGCTTCCAACATGAGGGAGTGTATCCATGAGTTGAATGCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGCTGCTTCCAACATGAGGGAGTGTATCCATGAGTTGAATGCCTA  100

seq1  ATCTTTCCAAAGACTGTCCTCATGTGCCCTTGGCCGTCTCTCCAGAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCAAAGACTGTCCTCATGTGCCCTTGGCCGTCTCTCCAGAGTAC  150

seq1  ATTTGCTTAACAGTGCATTTCTTCTTTTCAGCATTCTTTGCAATCTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTAACAGTGCATTTCTTCTTTTCAGCATTCTTTGCAATCTGGAT  200

seq1  AACATGAAAATCTCTTAAATCATCAAAGGCTAATCCTTAAGAGTTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAATCTCTTAAATCATCAAAGGCTAATCCTTAAGAGTTTCTTC  250

seq1  TTTACTCTCTTCTGCCTCTCTTGCTTTCTCTACCTAGTAAAGAGAAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCTCTTCTGCCTCTCTTGCTTTCTCTACCTAGTAAAGAGAAACTA  300

seq1  GACGGTCCTTTCCACACTTTGCTTGAAAATCTTTTCTGCAAGATGTCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTCCTTTCCACACTTTGCTTGAAAATCTTTTCTGCAAGATGTCCAA  350

seq1  CTTCATCATTTGTAGCTTCCACCTAGCAAGACATGCTTTAGCCAAGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCATTTGTAGCTTCCACCTAGCAAGACATGCTTTAGCCAAGTTTT  400

seq1  TTATTACTTTA--TAAAAAATGCCTTTCTGTACTTTCCAATATGACTTCA  448
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TTATTACTTTAATAAAAAAATGCCTTTCTGTACTTTCCAATATGACTTCA  450

seq1  TTTGTTTCTGGGACCTGACCTAAGATTCCC-TTGCATTTCTAGCTCTTCA  497
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  TTTGTTTCTGGGACCTGACCTAAGATTCCCTTTGCATTTCTAGCTCTTC-  499

seq1  AGACAGTATTGG-ATA-TTTCTTTGTCCTTTAAGTTTTCACCAATTCTTT  545
      |||||||||||| ||| ||||||||||||||||||||||| |||||||||
seq2  AGACAGTATTGGAATATTTTCTTTGTCCTTTAAGTTTTCA-CAATTCTTT  548

seq1  GAGAATTTCTTTTTTTTTCTTTTTTTTTTAATTGGGTATTTATTTCATTT  595
      |||||||||  |||||||||||||||    | ||||||||||||||| ||
seq2  GAGAATTTC--TTTTTTTCTTTTTTT----AATGGGTATTTATTTCA-TT  591

seq1  ACATTTCCAATGCTATCCTAAAAGTCCCCCACA-TGCTCCCTCACC  640
      |||||    |||||||||||||||  ||||||| |||| |||||||
seq2  ACATT---CATGCTATCCTAAAAGGTCCCCACATTGCTTCCTCACC  634