BAC Information

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BAC

Clone NameB6Ng01-284A03
Chromosome1 (Build37)
Map Location 62,620,638 - 62,775,337
singlet/doubletdoublet
Overlap genePard3b, LOC667592, Nrp2
Upstream genenone
Downstream geneLOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284A03.bB6Ng01-284A03.g
ACCGA082820GA082821
length1,1111,079
definitionB6Ng01-284A03.b B6Ng01-284A03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,620,638 - 62,621,749)(62,774,250 - 62,775,337)
sequence
gaattcagtaatgagttctgtgtagatgaatcaatgcccaattaaatgat
tatatcaaatctaactttaaatgttgacttaaaataatcacattttaaag
acattgaaactgagatgatgtctgcttctaatcagaagaatgaagtccat
atttcctagcctggtacaagagtagagtgttctgatggactgaagaattt
gataaggggaggaaaatttaggaaaggaattacctgtgcgctcagagctg
ggctggaccgcagaagcagagcccataattcctattctcttttgcatctt
tagccttcttctcgggaggtttttatttttcctttcctaatctccacttc
cctttccaggctgccttgtctgtgcatcagtgttcattgatctaacttct
gtagaccctgttttcatgagccactaatgttctaccagtttttgtgcctt
taagatggatgtggatagctgtggccacttctgttgctgtgttcattcat
ccatccaactcttgatgagcctccacagccttcctaatactgtgtccagt
taatacagtttctcatgttgtagtgaccccactcccactttaaaattatt
ttcgttcctacttcatattttaatcctgctactgttataaatcataatgt
aaatatttgtgttttttcaatggtcttgggtgactcttgtgaaaggatcg
ttcaacctcccaaggggtcacaacccacaggttgagaaccattgttctaa
atgtttatggcattaagttgatcagggagagaaatacctaggcagaaaag
atattcccaacatccagaacatttgtgatgcgatcaaattattaagtgag
caagacagagttgcaaagggagtaattgttggttagtaaaggccttgaat
agcggaccaagtaattgacaatgttatatactggttaggtttttcttctg
aactatagagttgcctgtgcatgcttgtattttgttttgggtatattttt
ctagctaacatttggccataaaaaacaaaccaatttctgagtcttcttgg
tactctccttccacttcattcctatcctcttcatttctctagtactgacc
tcatggatagg

gaattccaggacagaggcactttgggagcaggtggcagatgtggcagtca
gagtttggatcctgttctcttggcgttttaagttacagagagctccaggg
gcaaactgtcactactgtctggtaagcaccgggctgtggaaataacagtt
ccacactaaggtccaagcaggaaggggctgtagccacgccagggtggaga
ttctgaatgtggcccttggtggccagtcagctggaactgtttcctcctct
caaagtgccacttggatgctgtgtcccgatatacatcctgaaacactgtg
gtggctctcagagcaaagccagacccggtcaggaatgcaagtcacagccc
tggcctcgctgcacagtggaaatgcatgtgttaaaataccccgtttgctg
ggcacggaagtagcacccaggaatatagggtgctgttaggctgagtctta
gtggaccatgagggaatatgtctagaaagtgcacacgcttctataagaag
agaggcaggttgcaggaagtctccaaggtagccggaaacagtctgggttg
aaccgtacttaaaggacttatttctctggaagccgtaagcaggtcacttg
tggtgtgtatggatcagctggctggctggtcaccatattgtgatgaccac
acacatacacataccacatacataccacaccacacacacacacacaccac
acatatgtggggaccccatagcatggagaagacattagtgctggtgatga
agtctaagagccacgtgtggaaaagaggcttgctgagaagggtacaatag
tgaagacgccccagaagagaagtctatagccccagcatttaacctacagc
ctgccctggggttgggatggagtcatgtatctggcagaccaaatataata
attataataataattattataatacatatatactttcttaccctcccaca
gttctcagaggatgaccacagataaatcactttgactttcagatgaaagt
gttccataaaccccaggtctcatcactgtaattgtagagtaatttatttt
atgatgataatgggaagaaaggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62620638_62621749
seq2: B6Ng01-284A03.b_47_1157

seq1  GAATTCAGTAATGAGTTCTGTGTAGATGAATCAATGCCCAATTAAATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATGAGTTCTGTGTAGATGAATCAATGCCCAATTAAATGAT  50

seq1  TATATCAAATCTAACTTTAAATGTTGACTTAAAATAATCACATTTTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAAATCTAACTTTAAATGTTGACTTAAAATAATCACATTTTAAAG  100

seq1  ACATTGAAACTGAGATGATGTCTGCTTCTAATCAGAAGAATGAAGTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAACTGAGATGATGTCTGCTTCTAATCAGAAGAATGAAGTCCAT  150

seq1  ATTTCCTAGCCTGGTACAAGAGTAGAGTGTTCTGATGGACTGAAGAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTAGCCTGGTACAAGAGTAGAGTGTTCTGATGGACTGAAGAATTT  200

seq1  GATAAGGGGAGGAAAATTTAGGACAGGAATTACCTGTGCGCTCAGAGCTG  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GATAAGGGGAGGAAAATTTAGGAAAGGAATTACCTGTGCGCTCAGAGCTG  250

seq1  GGCTGGACCGCAGAAGCAGAGCCCATAATTCCTATTCTCTTTTGCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGACCGCAGAAGCAGAGCCCATAATTCCTATTCTCTTTTGCATCTT  300

seq1  TAGCCTTCTTCTCGGGAGGTTTTTATTTTTCCTTTCCTAATCTCCACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCTTCTCGGGAGGTTTTTATTTTTCCTTTCCTAATCTCCACTTC  350

seq1  CCTTTCCAGGCTGCCTTGTCTGTGCATCAGTGTTCATTGATCTAACTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAGGCTGCCTTGTCTGTGCATCAGTGTTCATTGATCTAACTTCT  400

seq1  GTAGACCCTGTTTTCATGAGCCACTAATGTTCTACCAGTTTTTGTGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCCTGTTTTCATGAGCCACTAATGTTCTACCAGTTTTTGTGCCTT  450

seq1  TAAGATGGATGTGGATAGCTGTGGCCACTTCTGTTGCTGTGTTCATTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGGATGTGGATAGCTGTGGCCACTTCTGTTGCTGTGTTCATTCAT  500

seq1  CCATCCAACTCTTGATGAGCCTCCACAGCCTTCCTAATACTGTGTCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAACTCTTGATGAGCCTCCACAGCCTTCCTAATACTGTGTCCAGT  550

seq1  TAATACAGTTTCTCATGTTGTAGTGACCCCACTCCCACTTTAAAATTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAGTTTCTCATGTTGTAGTGACCCCACTCCCACTTTAAAATTATT  600

seq1  TTCGTTCCTACTTCATATTTTAATCCTGCTACTGTTATAAATCATAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTCCTACTTCATATTTTAATCCTGCTACTGTTATAAATCATAATGT  650

seq1  AAATATTTGTGTTTTTTCAATGGTCTTGGGTGACTCTTGTGAAAGGATCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGTGTTTTTTCAATGGTCTTGGGTGACTCTTGTGAAAGGATCG  700

seq1  TTCAACCTCCCAAGGGGTCACAACCCACAGGTTGAGAACCATTGTTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCTCCCAAGGGGTCACAACCCACAGGTTGAGAACCATTGTTCTAA  750

seq1  ATGTTTATGGCATTAAGTTGATCAGGGAGAGAAATACCTAGGCAGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATGGCATTAAGTTGATCAGGGAGAGAAATACCTAGGCAGAAAAG  800

seq1  ATATTCCCAACATCCAGAACATTTGTGATGCGATCAAATTATTAAGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCAACATCCAGAACATTTGTGATGCGATCAAATTATTAAGTGAG  850

seq1  CAAGACAGAGTTGCAAAGGGAGTAATTGTTGGTTAGTAAAGGCCTTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGAGTTGCAAAGGGAGTAATTGTTGGTTAGTAAAGGCCTTGAAT  900

seq1  AGCGGACCAAGTAATTGACAATGTTATATACTGGTTAGGTTTTTCTTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGACCAAGTAATTGACAATGTTATATACTGGTTAGGTTTTTCTTCTG  950

seq1  AACTATAGAGTTGCCTGTGCATGCTTGTATTTTGTTTT-GGTATATTTTT  999
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTATAGAGTTGCCTGTGCATGCTTGTATTTTGTTTTGGGTATATTTTT  1000

seq1  CTAGCT-ACATTTTGCCATAAAAA--CAACCATTTTCTGAGTCCTTCTGG  1046
      |||||| |||||| ||||||||||   ||||| ||||||||| ||||| |
seq2  CTAGCTAACATTTGGCCATAAAAAACAAACCAATTTCTGAGT-CTTCTTG  1049

seq1  GTAACTCTTCCTTCCACTTCA-TCCTATCCTCCTTCATTTCTCTAGTACT  1095
      || |||| ||||||||||||| ||||||||| ||||||||||||||||| 
seq2  GT-ACTC-TCCTTCCACTTCATTCCTATCCT-CTTCATTTCTCTAGTAC-  1095

seq1  TGAACTCATTGGATAGG  1112
      ||| |||| ||||||||
seq2  TGACCTCA-TGGATAGG  1111


seq1: chr1_62774250_62775337
seq2: B6Ng01-284A03.g_68_1146 (reverse)

seq1  CCCCACCCCCTTTCTCCCATTATCATCATTAAAATAATTACTCTAACAAT  50
      ||||||||| ||  ||||||||||||||| |||  ||||||||| |||||
seq2  CCCCACCCCTTTCTTCCCATTATCATCATAAAATAAATTACTCT-ACAAT  49

seq1  TACAGTTGATGAGACCTGGGGTTTATGGAACACCTTTCATCTGAAAGTTC  100
      ||||| |||||||||||||||||||||||||| |||||||||||||| ||
seq2  TACAG-TGATGAGACCTGGGGTTTATGGAACA-CTTTCATCTGAAAG-TC  96

seq1  AAAGTGATTTATCTGTGTGTCATCCTCTGAGAACTGTGGGAGGGTAAGAA  150
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGTGATTTATCTGTG-GTCATCCTCTGAGAACTGTGGGAGGGTAAGAA  145

seq1  AGTATTATTATTGTTATTATTATTATTATTATTATTATTATTATTATTTG  200
      ||||    |||   |||||| || ||||||||||| ||||||| ||||||
seq2  AGTA----TATATGTATTATAATAATTATTATTATAATTATTA-TATTTG  190

seq1  GTCCTGCCAGATACATGACTCCAT-CCAACCCCAGGGCAGGCTGTAGGTT  249
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GT-CTGCCAGATACATGACTCCATCCCAACCCCAGGGCAGGCTGTAGGTT  239

seq1  AAATGCTGGGG-TATAGACTTCTCTTCTGGGGCGTCTTCACTATTGTACC  298
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGGGGCTATAGACTTCTCTTCTGGGGCGTCTTCACTATTGTACC  289

seq1  CTTCTCAGCAAGCCTCTTTTCCACACGTGGCTCTTAGACTTCATCACCAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGCAAGCCTCTTTTCCACACGTGGCTCTTAGACTTCATCACCAG  339

seq1  CACTAATGTCTTCTCCATGCTATGGGGTCCCCACATATGTGTGGTGTGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGTCTTCTCCATGCTATGGGGTCCCCACATATGTGTGGTGTGTG  389

seq1  TGTGTGTGTGGTGTGGTATGTATGTGGTATGTGTATGTGTGTGGTCATCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGGTGTGGTATGTATGTGGTATGTGTATGTGTGTGGTCATCA  439

seq1  CAATATGGTGACCAGCCAGCCAGCTGATCCATACACACCACAAGTGACCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGGTGACCAGCCAGCCAGCTGATCCATACACACCACAAGTGACCT  489

seq1  GCTTACGGCTTCCAGAGAAATAAGTCCTTTAAGTACGGTTCAACCCAGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACGGCTTCCAGAGAAATAAGTCCTTTAAGTACGGTTCAACCCAGAC  539

seq1  TGTTTCCGGCTACCTTGGAGACTTCCTGCAACCTGCCTCTCTTCTTATAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCGGCTACCTTGGAGACTTCCTGCAACCTGCCTCTCTTCTTATAG  589

seq1  AAGCGTGTGCACTTTCTAGACATATTCCCTCATGGTCCACTAAGACTCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTGTGCACTTTCTAGACATATTCCCTCATGGTCCACTAAGACTCAG  639

seq1  CCTAACAGCACCCTATATTCCTGGGTGCTACTTCCGTGCCCAGCAAACGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGCACCCTATATTCCTGGGTGCTACTTCCGTGCCCAGCAAACGG  689

seq1  GGTATTTTAACACATGCATTTCCACTGTGCAGCGAGGCCAGGGCTGTGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTAACACATGCATTTCCACTGTGCAGCGAGGCCAGGGCTGTGAC  739

seq1  TTGCATTCCTGACCGGGTCTGGCTTTGCTCTGAGAGCCACCACAGTGTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTCCTGACCGGGTCTGGCTTTGCTCTGAGAGCCACCACAGTGTTT  789

seq1  CAGGATGTATATCGGGACACAGCATCCAAGTGGCACTTTGAGAGGAGGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTATATCGGGACACAGCATCCAAGTGGCACTTTGAGAGGAGGAA  839

seq1  ACAGTTCCAGCTGACTGGCCACCAAGGGCCACATTCAGAATCTCCACCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCAGCTGACTGGCCACCAAGGGCCACATTCAGAATCTCCACCCT  889

seq1  GGCGTGGCTACAGCCCCTTCCTGCTTGGACCTTAGTGTGGAACTGTTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGGCTACAGCCCCTTCCTGCTTGGACCTTAGTGTGGAACTGTTATT  939

seq1  TCCACAGCCCGGTGCTTACCAGACAGTAGTGACAGTTTGCCCCTGGAGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGCCCGGTGCTTACCAGACAGTAGTGACAGTTTGCCCCTGGAGCT  989

seq1  CTCTGTAACTTAAAACGCCAAGAGAACAGGATCCAAACTCTGACTGCCAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAACTTAAAACGCCAAGAGAACAGGATCCAAACTCTGACTGCCAC  1039

seq1  ATCTGCCACCTGCTCCCAAAGTGCCTCTGTCCTGGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCACCTGCTCCCAAAGTGCCTCTGTCCTGGAATTC  1079


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