BAC Information

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BAC

Clone NameB6Ng01-285G10
Chromosome1 (Build37)1 (Build37)
Map Location 103,845,632 - 103,846,706105,505,253 - 105,505,329
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285G10.bB6Ng01-285G10.g
ACCGA083860GA083861
length1,082559
definitionB6Ng01-285G10.b B6Ng01-285G10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(103,845,632 - 103,846,706)(105,505,253 - 105,505,329)
sequence
gaattcttttgagaaagcatcagattgattttcagagaaattgtagaagt
ttgtggtcccactagtgatggaagagtgttctcctttcccaacatcctca
ctagcatgtgatgtcctatgagttttttatcacagccattctgattgttg
gaaggtgtcatctcagggtcgtttgatttgcatttccctaatagataagg
atattgatcatatctttaagtgcttctcagccatttgagattcctctgct
cccattttctctgtcatcctcatgagcagaaatttaagggcaaagtcttg
ctcgtcagttgtgataggatatccagggcttgctgtagtaggagaggtag
gttctggtgaagtggtattgcactgggttcttaggattatgtttttgggt
ttgcctttcaccatctagttcattctgctgttggctggctggtagttcca
ggatatcataggttagcacaggactcccagaaggcaagtggatctttgag
gtagtgagcagtgtactgatccatgattcaggtgccagtgattgccaagg
gaaaaatggagctgtgatgtgtatggcagtgatcatggttactgactttg
ctggtgtcccacaaatgagatgaatggggaatgggggtttcacctgtgtg
tcatgtattggagctggctttcctggaaccaggcagaatttttgggttgg
gagcagtgtgcagtgttcataattgtatgtggaagtgtcagcaggaagga
agtttttcctactattcttgacattatctttaacacaataatgggtccag
agtctcaggatatcatctgagtaaacattcatcttatacagtactgttgt
attatttcaatacaaataatagcatgcctgtagtgcatgggttataatga
tcagagaaagcattttatttttttacacacatgttacacatattccattt
ttgtttcattctttagcaacaagtgtctaggttatattcaattgttttcc
aacctttagttgtctggtaaaaaatcaaaacttaggaaatactgtccttt
tctaagacagatccagggtggcctttttccat

ttaagattgtgtggctggtgttgtgggtatctggtggtggtcagctgact
gtgcaccctagctaccccggtgctgcttggaccagaaggggcttgtgccc
caactcagacggggttttctgcttccctgactaatgcagtctcaagtcct
gagcgattggaggtctattttaagggtaataatatggctatcataagatc
tagttatactataagtaaaacttcccaaggaatcaaagtcagcatcacaa
atgaatttgcacacctgtatttatgtggcactatttattttaggcaaaac
ttgaaatcagcttaagttgtttaccaccagaagaatgggtatagaaaatg
gggtctatgtattcaacagtgttctattcagcagtgaaaaaaaatggaag
tatgtgattgacataaaaacggatggaactggaaatcatcacagtgagta
gaaaaatgtagaagcagaaagacaaatactacagtcttgcatatatatat
atatatatatatatatatatatatatatatatatacatatatgtgtgtga
gagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103845632_103846706
seq2: B6Ng01-285G10.b_43_1124

seq1  GAATTCTTTTGAGAAAGCATCAGATTGATTTTCAGAGAAATTGTAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGAGAAAGCATCAGATTGATTTTCAGAGAAATTGTAGAAGT  50

seq1  TTGTGGTCCCACTAGTGATGGAAGAGTGTTCTCCTTTCCCAACATCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTCCCACTAGTGATGGAAGAGTGTTCTCCTTTCCCAACATCCTCA  100

seq1  CTAGCATGTGATGTCCTATGAGTTTTTTATCACAGCCATTCTGATTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATGTGATGTCCTATGAGTTTTTTATCACAGCCATTCTGATTGTTG  150

seq1  GAAGGTGTCATCTCAGGGTCGTTTGATTTGCATTTCCCTAATAGATAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTCATCTCAGGGTCGTTTGATTTGCATTTCCCTAATAGATAAGG  200

seq1  ATATTGATCATATCTTTAAGTGCTTCTCAGCCATTTGAGATTCCTCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGATCATATCTTTAAGTGCTTCTCAGCCATTTGAGATTCCTCTGCT  250

seq1  CCCATTTTCTCTGTCATCCTCATGAGCAGAAATTTAAGGGCAAAGTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTCTCTGTCATCCTCATGAGCAGAAATTTAAGGGCAAAGTCTTG  300

seq1  CTCGTCAGTTGTGATAGGATATCCAGGGCTTGCTGTAGTAGGAGAGGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCAGTTGTGATAGGATATCCAGGGCTTGCTGTAGTAGGAGAGGTAG  350

seq1  GTTCTGGTGAAGTGGTATTGCACTGGGTTCTTAGGATTATGTTTTTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGTGAAGTGGTATTGCACTGGGTTCTTAGGATTATGTTTTTGGGT  400

seq1  TTGCCTTTCACCATCTAGTTCATTCTGCTGTTGGCTGGCTGGTAGTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTCACCATCTAGTTCATTCTGCTGTTGGCTGGCTGGTAGTTCCA  450

seq1  GGATATCATAGGTTAGCACAGGACTCCCAGAAGGCAAGTGGATCTTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCATAGGTTAGCACAGGACTCCCAGAAGGCAAGTGGATCTTTGAG  500

seq1  GTAGTGAGCAGTGTACTGATCCATGATTCAGGTGCCAGTGATTGCCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAGCAGTGTACTGATCCATGATTCAGGTGCCAGTGATTGCCAAGG  550

seq1  GAAAAATGGAGCTGTGATGTGTATGGCAGTGATCATGGTTACTGACTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGGAGCTGTGATGTGTATGGCAGTGATCATGGTTACTGACTTTG  600

seq1  CTGGTGTCCCACAAATGAGATGAATGGGGAATGGGGGTTTCACCTGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTCCCACAAATGAGATGAATGGGGAATGGGGGTTTCACCTGTGTG  650

seq1  TCATGTATTGGAGCTGGCTTTCCTGGAACCAGGCAGAATTTTTGGGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTATTGGAGCTGGCTTTCCTGGAACCAGGCAGAATTTTTGGGTTGG  700

seq1  GAGCAGTGTGCAGTGTTCATAATTGTATGTGGAAGTGTCAGCAGGAAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGTGCAGTGTTCATAATTGTATGTGGAAGTGTCAGCAGGAAGGA  750

seq1  AGTTTTTCCTACTATTCTTGACATTATCTTTAACACAATAATGGGTCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCCTACTATTCTTGACATTATCTTTAACACAATAATGGGTCCAG  800

seq1  AGTCTCAGGATATCATCTGAGTAAACATTCATCTTATACAGTACTGTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGATATCATCTGAGTAAACATTCATCTTATACAGTACTGTTGT  850

seq1  ATTATTTCAATACAAATAATAGCATGCCTGTAGTGCAT-GGTTAT-ATGA  898
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  ATTATTTCAATACAAATAATAGCATGCCTGTAGTGCATGGGTTATAATGA  900

seq1  TCAGAGAAAGCATTTTA-TTTTTTACACACATGTTTACACATATTCAATT  947
      ||||||||||||||||| ||||||||||||||| |||||||||||| |||
seq2  TCAGAGAAAGCATTTTATTTTTTTACACACATG-TTACACATATTCCATT  949

seq1  TTTG-TTCATTCTTTAGCAACAAGGTGTCTAGGGTTATATTCAAATTGTT  996
      |||| |||||||||||||||||| ||||||| |||||||||| |||||||
seq2  TTTGTTTCATTCTTTAGCAACAA-GTGTCTA-GGTTATATTC-AATTGTT  996

seq1  TTCCAACTTTTAGTTGTCTGGTAAAAAATCAAAACTTAGGAAATACTGT-  1045
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TTCCAACCTTTAGTTGTCTGGTAAAAAATCAAAACTTAGGAAATACTGTC  1046

seq1  CTTTTCTAAGACAGA--CA--GTGGC--TTTTCCAT  1075
      |||||||||||||||  ||  |||||  ||||||||
seq2  CTTTTCTAAGACAGATCCAGGGTGGCCTTTTTCCAT  1082


seq1: chr1_105505253_105505329
seq2: B6Ng01-285G10.g_565_633 (reverse)

seq1  CTCTCTCTCTCTCTCTCACACACACATATATGTATATATATATATATATA  50
              ||||||||| ||||||||||||||||||||||||||||||||
seq2  --------CTCTCTCTCTCACACACATATATGTATATATATATATATATA  42

seq1  TATATATATATATATATATATATATAT  77
      |||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATAT  69


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