BAC Information

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BAC

Clone NameB6Ng01-286G07
Chromosome1 (Build37)
Map Location 92,429,796 - 92,590,553
singlet/doubletdoublet
Overlap geneCops8
Upstream geneCentg2, Gbx2, Asb18, Iqca, Cxcr7
Downstream geneCol6a3, Mlph, Prlh, Rab17, Lrrfip1, Gm817, LOC665766, Ramp1, Ube2f, LOC665783, Scly, Espnl, Klhl30, BC056923, Ilkap, 1700020N18Rik, Hes6, Per2, Traf3ip1, Asb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286G07.bB6Ng01-286G07.g
ACCGA084601GA084602
length993732
definitionB6Ng01-286G07.b B6Ng01-286G07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,589,776 - 92,590,553)(92,429,796 - 92,430,527)
sequence
gaattcattctggtattatgagtgagtcaaagacaaccagtttttatttt
atttataaatgttccaacgatatttttgaagtgatccttcttcctcatat
ctgtcttgagcaagactctcatccacgtctccttcttgactctcagttga
ctgcctcacctctcaattcctttactgtcctttgagattgtgcttggata
tcagacagaagaaatctggtttcgttaaatctcctcatgccaggcttctc
cttaaaagtcattattattgttattctgttctattataattacataaccc
ccctccccttttctcctcccagtccctccatgtcccactttttctctttc
aaattcaaggcctcttttttctttaattgttgttaaatatgtatgtacac
acacacacacacacacacacacacacgtacctaaatgtattatatatata
tacaacctgctgagtctgtataatgttgcttgcctgtatcttttcaggct
gatcatttgttatcagataagcagttggccctggggaagactatttctct
tactttctgtattccttatgtgcctgtatttctgtgtgtacaatgggggt
ctcctgagctctccttgcccctgagttcttttagatcttgcccagagcca
gtctcccttgtcagctaactcttcagttgcttttcaaaccatactgaagt
cctttgactttgggtatgctatatagaggccactgacattcattagagaa
ttccctgccagtgcaaggcatgagtccactcagtccctgctgtatgggga
aaaggaaccaccatttgttctctggctatctgacacagaagagcaattgc
tcactacagctctctgtcttgccaggcttcctcttgctgcctgctgtggg
tcccctttcacgtgctcactggaatttctgggtggccagcaccaagtgga
tagttgaaggtttgcaaaacccccaggaattcttggagcatgg
gaattccatctcgcacgggtgtgtccccatctcaccactcaggacaaccc
tcaggacacaggagccaagaacacacgtggttctgaagccttactgttgc
catttggattctttttaaaacatcttcagagaggttactaaacaggcact
gagcagtgagagcgcctttagaccttattattgcttatcatacccaggtg
tggagaatttcaaacatcccaggggactcatactgatgtcagataccaga
accttattcttccttgcagatattaagtctgaattattctcattaaaaat
aagacatttgcatgagcaactggaacatgtatctcggctcgtaaggcagc
cttgctcagcgagggcttgggatagaattggaatccagggcaaggccttg
gctactgtaagaatttccactcataaaataacagcaagtgcttgctgtgt
gcttcacaatgttatactctctcctatttggaaaggaaagcggtgacgtg
tgcctctaggaagaaatacctcacactagcaaacacgcagggacctggtt
ttaaagaaatggttgtttttaatgaaaaggaaagcaagactaagggaaca
tggagtgtgagcacattactaaacttccagtcagggccagggggctgttg
tcacagcagaggaggctttggttgttggccactggagacacatgacagca
aaacatatggaggaggaggaagggggatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_92589776_92590553
seq2: B6Ng01-286G07.b_47_824 (reverse)

seq1  TGGACTCATGCCTTGCACTGGCAGGGAATTCTCTAATGAATGTCAGTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCATGCCTTGCACTGGCAGGGAATTCTCTAATGAATGTCAGTGGC  50

seq1  CTCTATATAGCATACCCAAAGTCAAAGGACTTCAGTATGGTTTGAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATATAGCATACCCAAAGTCAAAGGACTTCAGTATGGTTTGAAAAGC  100

seq1  AACTGAAGAGTTAGCTGACAAGGGAGACTGGCTCTGGGCAAGATCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGAGTTAGCTGACAAGGGAGACTGGCTCTGGGCAAGATCTAAAA  150

seq1  GAACTCAGGGGCAAGGAGAGCTCAGGAGACCCCCATTGTACACACAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGGGCAAGGAGAGCTCAGGAGACCCCCATTGTACACACAGAAA  200

seq1  TACAGGCACATAAGGAATACAGAAAGTAAGAGAAATAGTCTTCCCCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCACATAAGGAATACAGAAAGTAAGAGAAATAGTCTTCCCCAGGG  250

seq1  CCAACTGCTTATCTGATAACAAATGATCAGCCTGAAAAGATACAGGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGCTTATCTGATAACAAATGATCAGCCTGAAAAGATACAGGCAAG  300

seq1  CAACATTATACAGACTCAGCAGGTTGTATATATATATAATACATTTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTATACAGACTCAGCAGGTTGTATATATATATAATACATTTAGGT  350

seq1  ACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACATATTTAACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATACATATTTAACAAC  400

seq1  AATTAAAGAAAAAAGAGGCCTTGAATTTGAAAGAGAAAAAGTGGGACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGAAAAAAGAGGCCTTGAATTTGAAAGAGAAAAAGTGGGACATG  450

seq1  GAGGGACTGGGAGGAGAAAAGGGGAGGGGGGTTATGTAATTATAATAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACTGGGAGGAGAAAAGGGGAGGGGGGTTATGTAATTATAATAGAA  500

seq1  CAGAATAACAATAATAATGACTTTTAAGGAGAAGCCTGGCATGAGGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAACAATAATAATGACTTTTAAGGAGAAGCCTGGCATGAGGAGAT  550

seq1  TTAACGAAACCAGATTTCTTCTGTCTGATATCCAAGCACAATCTCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACGAAACCAGATTTCTTCTGTCTGATATCCAAGCACAATCTCAAAGG  600

seq1  ACAGTAAAGGAATTGAGAGGTGAGGCAGTCAACTGAGAGTCAAGAAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAAGGAATTGAGAGGTGAGGCAGTCAACTGAGAGTCAAGAAGGAG  650

seq1  ACGTGGATGAGAGTCTTGCTCAAGACAGATATGAGGAAGAAGGATCACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGATGAGAGTCTTGCTCAAGACAGATATGAGGAAGAAGGATCACTT  700

seq1  CAAAAATATCGTTGGAACATTTATAAATAAAATAAAAACTGGTTGTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATATCGTTGGAACATTTATAAATAAAATAAAAACTGGTTGTCTTT  750

seq1  GACTCACTCATAATACCAGAATGAATTC  778
      ||||||||||||||||||||||||||||
seq2  GACTCACTCATAATACCAGAATGAATTC  778

seq1: chr1_92429796_92430527
seq2: B6Ng01-286G07.g_68_799

seq1  GAATTCCATCTCGCACGGGTGTGTCCCCATCTCACCACTCAGGACAACCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTCGCACGGGTGTGTCCCCATCTCACCACTCAGGACAACCC  50

seq1  TCAGGACACAGGAGCCAAGAACACACGTGGTTCTGAAGCCTTACTGTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACACAGGAGCCAAGAACACACGTGGTTCTGAAGCCTTACTGTTGC  100

seq1  CATTTGGATTCTTTTTAAAACATCTTCAGAGAGGTTACTAAACAGGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGATTCTTTTTAAAACATCTTCAGAGAGGTTACTAAACAGGCACT  150

seq1  GAGCAGTGAGAGCGCCTTTAGACCTTATTATTGCTTATCATACCCAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTGAGAGCGCCTTTAGACCTTATTATTGCTTATCATACCCAGGTG  200

seq1  TGGAGAATTTCAAACATCCCAGGGGACTCATACTGATGTCAGATACCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATTTCAAACATCCCAGGGGACTCATACTGATGTCAGATACCAGA  250

seq1  ACCTTATTCTTCCTTGCAGATATTAAGTCTGAATTATTCTCATTAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTCTTCCTTGCAGATATTAAGTCTGAATTATTCTCATTAAAAAT  300

seq1  AAGACATTTGCATGAGCAACTGGAACATGTATCTCGGCTCGTAAGGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTGCATGAGCAACTGGAACATGTATCTCGGCTCGTAAGGCAGC  350

seq1  CTTGCTCAGCGAGGGCTTGGGATAGAATTGGAATCCAGGGCAAGGCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCAGCGAGGGCTTGGGATAGAATTGGAATCCAGGGCAAGGCCTTG  400

seq1  GCTACTGTAAGAATTTCCACTCATAAAATAACAGCAAGTGCTTGCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTAAGAATTTCCACTCATAAAATAACAGCAAGTGCTTGCTGTGT  450

seq1  GCTTCACAATGTTATACTCTCTCCTATTTGGAAAGGAAAGCGGTGACGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCACAATGTTATACTCTCTCCTATTTGGAAAGGAAAGCGGTGACGTG  500

seq1  TGCCTCTAGGAAGAAATACCTCACACTAGCAAACACGCAGGGACCTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTAGGAAGAAATACCTCACACTAGCAAACACGCAGGGACCTGGTT  550

seq1  TTAAAGAAATGGTTGTTTTTAATGAAAAGGAAAGCAAGACTAAGGGAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAATGGTTGTTTTTAATGAAAAGGAAAGCAAGACTAAGGGAACA  600

seq1  TGGAGTGTGAGCACATTACTAAACTTCCAGTCAGGGCCAGGGGGCTGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGTGAGCACATTACTAAACTTCCAGTCAGGGCCAGGGGGCTGTTG  650

seq1  TCACAGCAGAGGAGGCTTTGGTTGTTGGCCACTGGAGACACATGACAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCAGAGGAGGCTTTGGTTGTTGGCCACTGGAGACACATGACAGCA  700

seq1  AAACATATGGAGGAGGAGGAAGGGGGATGGTG  732
      ||||||||||||||||||||||||||||||||
seq2  AAACATATGGAGGAGGAGGAAGGGGGATGGTG  732