BAC Information

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BAC

Clone NameB6Ng01-286N04
Chromosome1 (Build37)
Map Location 144,685,806 - 144,686,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286N04.bB6Ng01-286N04.g
ACCGA084919GA084920
length5001,033
definitionB6Ng01-286N04.b B6Ng01-286N04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttttggagtccacagatacttagaatacctaagatataagatataatttg
tgaatctcatgaaactaaagaagaacgaagaccaaagtgtggacattttg
ccccttcttagaattgggaacaaaacacccatggaaggagttacagagac
aaagtttggagctgtcacgaaaggatggaccatctagagactgccatatc
cggggatccatcccataatcagcttccaaacactgacaccattgcataca
ctaacaagattttgctgaaaggacccagatatagctgtctcttgtgagat
tatgccggggcctaacaaacacagaagtggatgctcacagtcagctattg
gatggatcacagggcccccaatggaggagctagagaaagtacccaaggag
ctaaagggatctgcagccctattggtggaacaacattatgaactaaccag

gaattctgtaacaaaaaggaagcaccaatttcaatttgcaaaaagtcact
caggtgtgaaatgtgactttctcccagaagcctctattccaccggtgtgg
aactcactcagaatcatattccctgcctcatctcaaataaaacaataaaa
tgtgtacaaatcctctatactttaaaattattcagccatgactacattaa
ttgtgaagcttcagtgactttattttcattttgagtattttcttaaatta
tcagctcaggtgttttcacttggtgctttcttattagtcatagtctgaat
cataaatctctgaaatgctgctttcagagagaaactggcatgaatatttc
acaaatttactcagcagcacgttgacaggtctggtaatttcatcagtatt
tacagtatattcttctgcatgagacaaaataaatttgtttttcccattca
gtataatttagttttatatgaatgcagccttatgaaatatcatagaagag
tttatgacaaaaaagtacaaaagaaaataaacctttcctcactcaggttt
aactctcaaacaccaaagtaaggaaaggatgagcgcatacaaacaaaaag
agggtttaaaaagaaaaatgattttaaaatagtcacaaattgatgatgag
ctgaagaaaggcactaaacttactttatgggatgaaacgtggtgcagaag
agtgcaatcatcttgacactccaaactcctgtttatcatctctccatcag
aaaactcttagaaataattaacgttttaagcaaagtggcagattataaag
tactacataaacatcagtagccttcatgtttagcaataacaaactcacca
aaggaaaaaatattcagaaaactatttaacttacaattgcctcaaaaaat
aacttagaataaagttgtcaaggtgtaaaagatttatacaaggaaaattt
aaaacactgaaaacaagattcaagaacacataaaagatggaaaaacactc
ttatatgcatggggtggatatgtatgtatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144685806_144686841
seq2: B6Ng01-286N04.g_66_1098

seq1  GAATTCTGTAACAAAAAGGAAGCACCAATTTCAATTTGCAAAAAGTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAACAAAAAGGAAGCACCAATTTCAATTTGCAAAAAGTCACT  50

seq1  CAGGTGTGAAATGTGACTTTCTCCCAGAAGCCTCTATTCCACCGGTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGAAATGTGACTTTCTCCCAGAAGCCTCTATTCCACCGGTGTGG  100

seq1  AACTCACTCAGAATCATATTCCCTGCCTCATCTCAAATAAAACAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTCAGAATCATATTCCCTGCCTCATCTCAAATAAAACAATAAAA  150

seq1  TGTGTACAAATCCTCTATACTTTAAAATTATTCAGCCATGACTACATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACAAATCCTCTATACTTTAAAATTATTCAGCCATGACTACATTAA  200

seq1  TTGTGAAGCTTCAGTGACTTTATTTTCATTTTGAGTATTTTCTTAAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAGCTTCAGTGACTTTATTTTCATTTTGAGTATTTTCTTAAATTA  250

seq1  TCAGCTCAGGTGTTTTCACTTGGTGCTTTCTTATTAGTCATAGTCTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCAGGTGTTTTCACTTGGTGCTTTCTTATTAGTCATAGTCTGAAT  300

seq1  CATAAATCTCTGAAATGCTGCTTTCAGAGAGAAACTGGCATGAATATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATCTCTGAAATGCTGCTTTCAGAGAGAAACTGGCATGAATATTTC  350

seq1  ACAAATTTACTCAGCAGCACGTTGACAGGTCTGGTAATTTCATCAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTACTCAGCAGCACGTTGACAGGTCTGGTAATTTCATCAGTATT  400

seq1  TACAGTATATTCTTCTGCATGAGACAAAATAAATTTGTTTTTCCCATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTATATTCTTCTGCATGAGACAAAATAAATTTGTTTTTCCCATTCA  450

seq1  GTATAATTTAGTTTTATATGAATGCAGCCTTATGAAATATCATAGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTTAGTTTTATATGAATGCAGCCTTATGAAATATCATAGAAGAG  500

seq1  TTTATGACAAAAAAGTACAAAAGAAAATAAACCTTTCCTCACTCAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGACAAAAAAGTACAAAAGAAAATAAACCTTTCCTCACTCAGGTTT  550

seq1  AACTCTCAAACACCAAAGTAAGGAAAGGATGAGCGCATACAAACAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCAAACACCAAAGTAAGGAAAGGATGAGCGCATACAAACAAAAAG  600

seq1  AGGGTTTAAAAAGAAAAATGATTTTAAAATAGTCACAAATTGATGATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTAAAAAGAAAAATGATTTTAAAATAGTCACAAATTGATGATGAG  650

seq1  CTGAAGAAAGGCACTAAACTTACTTTATGGGATGAAACGTGGTGCAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAAAGGCACTAAACTTACTTTATGGGATGAAACGTGGTGCAGAAG  700

seq1  AGTGCAATCATCTTGACACTCCAAACTCCTGTTTATCATCTCTCCATCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAATCATCTTGACACTCCAAACTCCTGTTTATCATCTCTCCATCAG  750

seq1  AAAACTCTTAGAAATAATTAACGTTTTAAGCAAAGTGGCAGATTATAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTAGAAATAATTAACGTTTTAAGCAAAGTGGCAGATTATAAAG  800

seq1  TACTACATAAACATCAGTAGCCTTCATGTTTAGCAATAACAAACTCACC-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACTACATAAACATCAGTAGCCTTCATGTTTAGCAATAACAAACTCACCA  850

seq1  AAGGAAAAAATATTCAGAAAACTATTTAACTTACAATTGCCTCAAAAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGGAAAAAATATTCAGAAAACTATTTAACTTACAATTGCCTC-AAAAAA  899

seq1  TAACTTAGAATAAAGTTGTCAAGGTGTAAAAGATTTATACAAGGAAAAAT  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAACTTAGAATAAAGTTGTCAAGGTGTAAAAGATTTATACAAGG-AAAAT  948

seq1  TTAAAACACTGAAAAACAAGATTCAAGAACACAATAAAAGATGGAAAAAC  999
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  TTAAAACACTG-AAAACAAGATTCAAGAACAC-ATAAAAGATGGAAAAAC  996

seq1  ACCTCTTATATGCAT-GGGTGGATATGTATGTATGTAT  1036
      | ||||||||||||| ||||||||||||||||||||||
seq2  A-CTCTTATATGCATGGGGTGGATATGTATGTATGTAT  1033