BAC Information

Click to search

BAC

Clone NameB6Ng01-286P19
Chromosome1 (Build37)
Map Location 125,629,751 - 125,630,845
singlet/doubletsinglet
Overlap geneDpp10
Upstream geneLOC666983
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286P19.bB6Ng01-286P19.g
ACCGA085037GA085038
length1,1021,191
definitionB6Ng01-286P19.b B6Ng01-286P19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcactaactatttcatttgggatgaggatagaaacaaaaagta
taagtggcccagtatagtggtaaacactgtaatactgggttttccatgtg
gaggtgggaggacaggtgtccaggtcaccttctgataaaggtcaatgtca
aggccacccctttgtggtaaaaggtctgctcccacaagtcaaaacaggaa
caaaagaaaagatgaccacatgcaatttaaaaaatttccaagtaaaatgt
gtccaactgccactaattcaatagctactatctcttttgatttcagagac
ttaattttagtcctgtgagtatagcttaagaaccagttggaagggaccac
caaatcaaaccgtcatccagtaaaattattctcacagccttcctcaagag
acaccacttgctcacagaattatgctagatgctggagctagagagagtag
aataagaaatttgtcctcaaggatcaaagctgcatttaatttctttcttt
ctctgcagcaatagcaataaacgtagtaattttccttttaagaattagta
accatcatattcacttgaatattgagtggcgatgggacttcaatttttag
ctttatagtcctttcttagtgactgatagtatggatttcagaggcccatt
aactctacttggtgtccacataagtaatcatgctctccattgtatgaatg
gattacatttttcataacgacctgcaaatataaaacgttcctttctcttc
ccattagttattctctctgggcacatgagtgcagaagacataatgaagtt
ccaggaggtttatctattcgagctcaagtaatatctcccaaggtgacatt
cctaagttaagagaagcagtgggtcttggattggtgttttgcaacactta
tgtagatggatattcagacagagcatttcttgtagggacacagaaacact
ttaacaagcctgatgatgtgctgaacacatggctctgcaggtaaagcact
gggctgcatgggtacaggttgggaatttgggacctcagcaccttacatta
tacaccacgtattctaccacctatttttttcagtggcaaggccaactgtc
aa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccaggagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaaatgaagactgaagtgtgaacactatgcccctccttagaagtggga
acaaaacacccatggaaggagttacagaaacaaagtatggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
tcagcttccaaatgctgacaccattgcatacactagcaagattttactga
aaggacccagatgtagctgtctcttgtgagactatgccggggcctagcaa
acacagaagtggatgctcacagtcagctaatggatggatcaccagggcct
cccaaatggaaggagctagagaaggtaccaaggagctaagggatcttcat
ccgttataggtgggacacattatgactaaccagtacccctgagcctctga
ctctagctgcatatgtatcaaaagatgggcttagtcggccatcactggta
agagaggccatttggaacactgctgactttgttgtggcctgttacagggt
aaatgccatgtgtctaaatgggaggggtatgtgtggaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125629751_125630845
seq2: B6Ng01-286P19.b_49_1150 (reverse)

seq1  TTGACAGTTGGCCTGGCCACTG-AGAAAATAGGTGGTAG-ATACGTGGTG  48
      |||||||||||||| ||||||| | |||||||||||||| ||||||||||
seq2  TTGACAGTTGGCCTTGCCACTGAAAAAAATAGGTGGTAGAATACGTGGTG  50

seq1  TTATATGT-AGGTGCTGAGGT-CCAAATT-CCAACTGTTAACCATGCAG-  94
      |   |||| |||||||||||| ||||||| |||||   || |||||||| 
seq2  TATAATGTAAGGTGCTGAGGTCCCAAATTCCCAACCTGTACCCATGCAGC  100

seq1  CCAGTGCTTTACCTGCAGAGCCATGTGTTCAGCACATCATCAGGCTTGTT  144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTTTACCTGCAGAGCCATGTGTTCAGCACATCATCAGGCTTGTT  150

seq1  -AAGTGTTTCTGTGTCCCTACAAGAAATGCTCTGTCTGAATATCCATCTA  193
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTCTGTGTCCCTACAAGAAATGCTCTGTCTGAATATCCATCTA  200

seq1  CATAAGTGTTGCAAAACACCAATCCAAGACCCACTGCTTCTCTTAACTTA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTGTTGCAAAACACCAATCCAAGACCCACTGCTTCTCTTAACTTA  250

seq1  GGAATGTCACCTTGGGAGATATTACTTGAGCTCGAATAGATAAACCTCCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTCACCTTGGGAGATATTACTTGAGCTCGAATAGATAAACCTCCT  300

seq1  GGAACTTCATTATGTCTTCTGCACTCATGTGCCCAGAGAGAATAACTAAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTCATTATGTCTTCTGCACTCATGTGCCCAGAGAGAATAACTAAT  350

seq1  GGGAAGAGAAAGGAACGTTTTATATTTGCAGGTCGTTATGAAAAATGTAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAGAAAGGAACGTTTTATATTTGCAGGTCGTTATGAAAAATGTAA  400

seq1  TCCATTCATACAATGGAGAGCATGATTACTTATGTGGACACCAAGTAGAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCATACAATGGAGAGCATGATTACTTATGTGGACACCAAGTAGAG  450

seq1  TTAATGGGCCTCTGAAATCCATACTATCAGTCACTAAGAAAGGACTATAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGGCCTCTGAAATCCATACTATCAGTCACTAAGAAAGGACTATAA  500

seq1  AGCTAAAAATTGAAGTCCCATCGCCACTCAATATTCAAGTGAATATGATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAAATTGAAGTCCCATCGCCACTCAATATTCAAGTGAATATGATG  550

seq1  GTTACTAATTCTTAAAAGGAAAATTACTACGTTTATTGCTATTGCTGCAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAATTCTTAAAAGGAAAATTACTACGTTTATTGCTATTGCTGCAG  600

seq1  AGAAAGAAAGAAATTAAATGCAGCTTTGATCCTTGAGGACAAATTTCTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAATTAAATGCAGCTTTGATCCTTGAGGACAAATTTCTTA  650

seq1  TTCTACTCTCTCTAGCTCCAGCATCTAGCATAATTCTGTGAGCAAGTGGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTCTCTCTAGCTCCAGCATCTAGCATAATTCTGTGAGCAAGTGGT  700

seq1  GTCTCTTGAGGAAGGCTGTGAGAATAATTTTACTGGATGACGGTTTGATT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGAGGAAGGCTGTGAGAATAATTTTACTGGATGACGGTTTGATT  750

seq1  TGGTGGTCCCTTCCAACTGGTTCTTAAGCTATACTCACAGGACTAAAATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTCCCTTCCAACTGGTTCTTAAGCTATACTCACAGGACTAAAATT  800

seq1  AAGTCTCTGAAATCAAAAGAGATAGTAGCTATTGAATTAGTGGCAGTTGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTGAAATCAAAAGAGATAGTAGCTATTGAATTAGTGGCAGTTGG  850

seq1  ACACATTTTACTTGGAAATTTTTTAAATTGCATGTGGTCATCTTTTCTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTTTACTTGGAAATTTTTTAAATTGCATGTGGTCATCTTTTCTTT  900

seq1  TGTTCCTGTTTTGACTTGTGGGAGCAGACCTTTTACCACAAAGGGGTGGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGTTTTGACTTGTGGGAGCAGACCTTTTACCACAAAGGGGTGGC  950

seq1  CTTGACATTGACCTTTATCAGAAGGTGACCTGGACACCTGTCCTCCCACC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACATTGACCTTTATCAGAAGGTGACCTGGACACCTGTCCTCCCACC  1000

seq1  TCCACATGGAAAACCCAGTATTACAGTGTTTACCACTATACTGGGCCACT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGGAAAACCCAGTATTACAGTGTTTACCACTATACTGGGCCACT  1050

seq1  TATACTTTTTGTTTCTATCCTCATCCCAAATGAAATAGTTAGTGAGGAAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTTGTTTCTATCCTCATCCCAAATGAAATAGTTAGTGAGGAAT  1100

seq1  TC  1095
      ||
seq2  TC  1102