BAC Information

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BAC

Clone NameB6Ng01-287D21
Chromosome1 (Build37)
Map Location 15,914,318 - 15,914,562
singlet/doubletsinglet
Overlap genenone
Upstream geneEG269105, LOC100039949, LOC100039959, Kcnb2, Ppia-ps1_109.1, Terf1, Gm106
Downstream geneLOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282, Stau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287D21.bB6Ng01-287D21.g
ACCGA085219GA085220
length918894
definitionB6Ng01-287D21.b B6Ng01-287D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatattggttccctgaattgtagagtgagggctattatggttg
gaaaggctaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtattgtattcctggaggcattgcggagattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatcccctt
taactctcctatctggccagtgcagaaaacagatggatcatggagaatga
cagttgattatcaaaaactaaattaggtagtaactccaattgcagctgct
gtaccagatgtagtttcgttacttgagcaaattaacacatctcctggcac
ctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtcc
ataagaaccaccagaagcaatttgctttcagttggcaaggacaacagtat
accttcatagttttgcctcaaggatatattaactctcctgccctgtgtca
taatttagttagaaggcatcttgatcatttggctcttccacaaaatatca
cattggtgcactatattgatgacattatgctgattggatcaagtgagcag
gaagtagcaaccacttttggactcattggtaacacatatgcatatcagag
gatgggaaaattcaaggaccatctacctcagtgaaattctttaggagtcc
agtggtgtggggcatgtagagatatttcccttctaaggtgaaagataagt
tattgcacctggccttctcctacaaccaagaaagaagcacaacacttagt
gggtctatttggattctgggagaaagcacatttctcaccttgggtgttgt
gactttagacctattttaccatagtgactcaaaaagctgctagcttgtgt
ggaggcctgtgaacagga
gaattcattatggagataaggcttgacacaaactcaaagataaccacctg
gctctttcttccgagtgctgggattaaaggcatgtgccatcatgcttagg
ccgaagattctatccaagctgccaagagagaaaagcaaagagtagtccta
cttaattataatatttatgaaacacaaaatgaccagcatggcaagatatt
cccaaggatgaaatagtgaaacttatgtctgcagtttaggaggctcagag
gtctttgtgctcacagataagacaaagaaaattaagaatgttagacacac
agtgttttgccttcaaaggaaaggatgcatagcctggtacccataaaact
gtgagcaaatttggttaatagcctggtgacctttgctcaattcgtggctg
agacggggtctttccccagtgcttagcatgagcttgtttttttctcaatc
tatagaacctgtttttatgtaaggtatcacatgtactttacaaagagttt
caaggtcatcacaattgatcttcattcagtttactttgttcctcaagact
agttatgtgtgttgcattgtgcagaccagatttgaattatcaccaggaat
gttttgatcaaattgtgccctacctctatatgaagaactacatgcaatct
gtggcattgagaaaaggaaaatcagtcatctctagggatgaaccacccag
ataggttatccaaaccctggtcacccttaaatatatacacaaagaacagc
actaaatggactcagtacaccacacacacatgcacacacacacacacaca
cacacacacacacacacacacttgctatgcatgccttgcttagcctgctt
tcatatacaaaccagaagccaattatctcttctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15914318_15914562
seq2: B6Ng01-287D21.g_832_959

seq1  ACACACACACACACACACACACACATACACACACACACACACACACACAC  50
        |||| ||||||||||  |||||| ||||||||||||||||||||||||
seq2  --ACAC-CACACACACATGCACACACACACACACACACACACACACACAC  47

seq1  ACACTTTGAAGTATTTTTTAAAGATAAAAATAAGTAGGAAACACTAAATC  100
      ||||                                    |||       
seq2  ACAC------------------------------------ACA-------  54

seq1  ATTAGCAGGAGATAACCTTGATGTCTGAGAGACAAGGGCATGCCCTTGAT  150
                      |||| | |             ||||| ||||| |
seq2  ----------------CTTGCTAT-------------GCATG-CCTTGCT  74

seq1  GAGGGACTCCTCTGA-ACACAGAACCATTACCTGAGATGAACAGGTGGAG  199
       |  | || || | | | ||| |||||                   | ||
seq2  TA--GCCTGCTTTCATATACA-AACCA-------------------GAAG  102

seq1  CCACTTACCCCATCAGCAAGGCAGCAAGTCCTTCTCTCTCTCTCTC  245
      ||| ||| |                     ||||||||||||||||
seq2  CCAATTATC--------------------TCTTCTCTCTCTCTCTC  128