BAC Information

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BAC

Clone NameB6Ng01-287J13
Chromosome1 (Build37)
Map Location 46,714,799 - 46,715,976
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b, LOC666855
Downstream geneSlc39a10, EG227061, LOC666869
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287J13.bB6Ng01-287J13.g
ACCGA085476GA085477
length1,0171,156
definitionB6Ng01-287J13.b B6Ng01-287J13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttggttgattttacctttgatgagtatgaagtgccccttct
tgtcttttttgataactttgggttggaagtcaattttattcaaaattaga
atggctatttcagcttgtttcttcagaccatatgcttggaaaattgtttt
ccatcctttttctctgaggtagtatctgtctttttccctgaggtgggttt
cctgtaagcagcaaactgtttgtcctgtttgtgtagccagtctgttagtc
tatgtctttttatttgggaattgagtccattgatattaagagatggtaaa
gaaatgtaattgttgcttcctattatttttgttgttatagttgggattct
gttcttgaagctgtcttcttttaggtttgttaaaggattactttcttgct
ttgtctacagtgtagtttctgtccttgtgttggtattttcccttcctatc
ctttgaagagctggattcgtagaaaagatattgtgtgaatttggttttgt
catggcattctttggttttccttctgtggtaattgagaattttgctggtt
atagttgcctgggcaggtgttagtgttctcttagggtctgtataacagga
tcttctggctttcatagtctctgctgagaatctgtgtaattctaataggc
ttgtttatatgtcacttgaccttttccctttactgctttaacattctgtc
ttagtgcatttgttgttctgattattatgtgtcaggaggaatttcttttc
tggtccagtctatttggagttctgtaggcttcttgtatgttcacgggcat
ctctttcttaggttagggaagttttcttctataattttgttgaaaatatt
tgctggtcctttaagttgaaaaccttcattctcatctactcctattatcc
gttgctttgaccttctcattgtgtcctatatttcctggattttttgagtt
agatcttttggattttgcattttctttgattgtgtgtccttattctctat
gaaacttctgcacctga

gaattcagcaggatcaacaggtatagcggatttcaagtgtgtacaaaagc
ataagaaccagacaaaagccactatgctcaaaccaagtgctttccaactc
tgactctttggtatttccaattttatatctacaagatccataaaaaatag
gcatttcaaagaaagaaagggaaaattaaaattattaaggaaaagaagag
gaggcaaaatatatgattagggtaaaattttataaaatttatttatatat
atttcatttgggaagattagctgcattcaactcttggttaaggagaagct
aagtgtctgctcattgggcttggcaacaaaataacaatttcccaagaata
ggcaccagagagccaagatggctgaaaaccaggaagaatggctccaggat
acccactcatcttctgggttaaagttgaatccccagagctggggaacatt
tccccagggaagaggctcaagactttgttctgaaatttgagcatgggaac
acctctgcaggtttctgtaagatgatatcaaacttataacataaactgga
tacttcttttcagctttaattgtactcagttatgaaaccttaaggtaagc
agccacacatggacttactgcagaacagagtgcagtggcccatttgtgag
agagtgacgtcagctgttacctttccctgtctagggatgcttttatagga
acatgtaataactattacttatttgatatgttgctataagactttatatt
ctttaatgagaaagaaaagataagcactcttaaattacctaccaggttct
tagatgccaggccaggattctggagaagattgtgaacatggacttgtcac
taaattcattgatggttacaatattgaaatgtctcatgtaacgaggagtt
attggatttcggccaccacctaaagattagaaagcatgggctcttaataa
tattgctagaatatgccaaagtattctcttcactatttgcagtttaaagt
aacctggaagatgatcatttatggtatgccaaaagatttaaaagtatacc
tgttggggagaacctaatatcacaacttattccactcagaatgagttttc
taatcaactatgagtaagtcattgcttatttatgtactctcccagcttga
ccaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46714799_46715976
seq2: B6Ng01-287J13.g_69_1224 (reverse)

seq1  AATTGGTCAAGATGTGGGGGAGGAGTGACAATAAAATAACCAAATGGAAT  50
      ||||||||||| |    |||| |||| |||   |||||| | ||||  | 
seq2  AATTGGTCAAGCT----GGGA-GAGT-ACA--TAAATAAGC-AATG--AC  39

seq1  TTACTCAAATAATTTGATTAGAAAAACCTCATCTTGAGTGGAAATAAGTT  100
      |||||||    | ||||||||||||  |||||  ||||||| ||||||||
seq2  TTACTCA---TAGTTGATTAGAAAA--CTCATTCTGAGTGG-AATAAGTT  83

seq1  GTGATATTAGTGTCTCCCCAAACAGGTAATTACTTTTAAATCTTTTGGCA  150
      ||||||||||  ||||||| ||||||||  ||||||||||||||||||||
seq2  GTGATATTAGGTTCTCCCC-AACAGGTA--TACTTTTAAATCTTTTGGCA  130

seq1  TACCATAAATTGATCATCTTCCAGGTTACTTTAAACTGCCAAATAGTGAA  200
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  TACCATAAA-TGATCATCTTCCAGGTTACTTTAAACTG-CAAATAGTGAA  178

seq1  GAGAATACTTTGGCATTATTCTAGCAATATTATTAAGAG-CCATGCTTTC  249
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  GAGAATACTTTGGCA-TATTCTAGCAATATTATTAAGAGCCCATGCTTTC  227

seq1  TAATCTTTAGGTGGTGGCCGAAATCCAATAACTCCTCGTTACATGAGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTAGGTGGTGGCCGAAATCCAATAACTCCTCGTTACATGAGACA  277

seq1  TTTCAATATTGTAACCATCAATGAATTTAGTGACAAGTCCATGTTCACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATATTGTAACCATCAATGAATTTAGTGACAAGTCCATGTTCACAA  327

seq1  TCTTCTCCAGAATCCTGGCCTGGCATCTAAGAACCTGGTAGGTAATTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCAGAATCCTGGCCTGGCATCTAAGAACCTGGTAGGTAATTTAA  377

seq1  GAGTGCTTATCTTTTCTTTCTCATTAAAGAATATAAAGTCTTATAGCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTTATCTTTTCTTTCTCATTAAAGAATATAAAGTCTTATAGCAAC  427

seq1  ATATCAAATAAGTAATAGTTATTACATGTTCCTATAAAAGCATCCCTAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAATAAGTAATAGTTATTACATGTTCCTATAAAAGCATCCCTAGA  477

seq1  CAGGGAAAGGTAACAGCTGACGTCACTCTCTCACAAATGGGCCACTGCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAAGGTAACAGCTGACGTCACTCTCTCACAAATGGGCCACTGCAC  527

seq1  TCTGTTCTGCAGTAAGTCCATGTGTGGCTGCTTACCTTAAGGTTTCATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTGCAGTAAGTCCATGTGTGGCTGCTTACCTTAAGGTTTCATAA  577

seq1  CTGAGTACAATTAAAGCTGAAAAGAAGTATCCAGTTTATGTTATAAGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTACAATTAAAGCTGAAAAGAAGTATCCAGTTTATGTTATAAGTTT  627

seq1  GATATCATCTTACAGAAACCTGCAGAGGTGTTCCCATGCTCAAATTTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCATCTTACAGAAACCTGCAGAGGTGTTCCCATGCTCAAATTTCAG  677

seq1  AACAAAGTCTTGAGCCTCTTCCCTGGGGAAATGTTCCCCAGCTCTGGGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTCTTGAGCCTCTTCCCTGGGGAAATGTTCCCCAGCTCTGGGGA  727

seq1  TTCAACTTTAACCCAGAAGATGAGTGGGTATCCTGGAGCCATTCTTCCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTTAACCCAGAAGATGAGTGGGTATCCTGGAGCCATTCTTCCTG  777

seq1  GTTTTCAGCCATCTTGGCTCTCTGGTGCCTATTCTTGGGAAATTGTTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGCCATCTTGGCTCTCTGGTGCCTATTCTTGGGAAATTGTTATT  827

seq1  TTGTTGCCAAGCCCAATGAGCAGACACTTAGCTTCTCCTTAACCAAGAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCCAAGCCCAATGAGCAGACACTTAGCTTCTCCTTAACCAAGAGT  877

seq1  TGAATGCAGCTAATCTTCCCAAATGAAATATATATAAATAAATTTTATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCAGCTAATCTTCCCAAATGAAATATATATAAATAAATTTTATAA  927

seq1  AATTTTACCCTAATCATATATTTTGCCTCCTCTTCTTTTCCTTAATAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACCCTAATCATATATTTTGCCTCCTCTTCTTTTCCTTAATAATT  977

seq1  TTAATTTTCCCTTTCTTTCTTTGAAATGCCTATTTTTTATGGATCTTGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTCCCTTTCTTTCTTTGAAATGCCTATTTTTTATGGATCTTGTA  1027

seq1  GATATAAAATTGGAAATACCAAAGAGTCAGAGTTGGAAAGCACTTGGTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAAATTGGAAATACCAAAGAGTCAGAGTTGGAAAGCACTTGGTTT  1077

seq1  GAGCATAGTGGCTTTTGTCTGGTTCTTATGCTTTTGTACACACTTGAAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATAGTGGCTTTTGTCTGGTTCTTATGCTTTTGTACACACTTGAAAT  1127

seq1  CCGCTATACCTGTTGATCCTGCTGAATTC  1178
      |||||||||||||||||||||||||||||
seq2  CCGCTATACCTGTTGATCCTGCTGAATTC  1156


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