BAC Information

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BAC

Clone NameB6Ng01-287K07
Chromosome1 (Build37)
Map Location 115,904,468 - 115,905,562
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287K07.bB6Ng01-287K07.g
ACCGA085512GA085513
length1,1751,095
definitionB6Ng01-287K07.b B6Ng01-287K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagttcaaaatttcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaactggacatagtactaccagaggatccagcaatatctctcctggg
catatatccagaagatgccccaacaggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtattcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccaaggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaaagtagcaggagctaaagggatctgcaacccta
tagtggacacattatgactaaccagtacccggagcttcttgacttctagc
tgcattatatatcaaagatgcctagttcggccatcactggaagagaaggc
cattggacttgcaaactttaatgccagtactggacccatggccaagggga
gtggtggtcaggggatgtgtgggtg
gaattctctcctcccaggaatagatcaatgctattaaagagaaccattct
cactgcacttcctctttaccatctaagggtttaacaagaaagccctttgt
tttggcaaaggagatggctcagtgaataaagtgcttggtatgaaagcata
agggcctgatctttattgccagaatccacactaaacaacaacaacaacaa
caacaaaacaaacaaacaaacaaaaaacgaacacacacacatacaaaaca
acaacaaaacaacaaaccaggtaattgtgacaataattccagcactagga
tgggaaagagatatctggggctcaccctagaactccatatcactgagaga
cagtgtttagaaaaatcaaggtgaatggaaaatttgacaatatccaagac
tgtcctctgacttctaaatctaagctcccaaaaatgtatatatatatatg
tcctctcacacatcccaatctcattcactagttatcagtatttggttttg
aatttcttagccatgggaatcaccatgaactaaatttatttttaactaaa
tttctacatctaaggtttttagctggacaaaatggagtaagactaagttt
gcatttctatactgctctgagcagctttctatggagtgtgaagatttcaa
attcaggtcctcattcttgtatggaaagctccttactatctttacaagtc
tatctacttggctagcttctgagctgtgcacttttgaattgatccagaag
caatgcttctttaggggccattaagttagaacaaatattttacatgtgag
aaagacaagaacgttgggagttatggggagaaaggctaaaggttttcata
tttttattccatagaaaatctgtttgaaaaagaaggaatgagggaggggc
tacagagatggttcagtggtttgagacaagatattgtttgcagagtacca
gacttcagttcttagcatcagtgcaggtgatgaccctttctgtaactgaa
ccacaaggaacatggcatcgttgtctggtctctgctgctacctgcacagt
gtgcatgatgcaataccacacatgcatgctccaggacacatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115904468_115905562
seq2: B6Ng01-287K07.g_65_1159

seq1  GAATTCTCTCCTCCCAGGAATAGATCAATGCTATTAAAGAGAACCATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTCCCAGGAATAGATCAATGCTATTAAAGAGAACCATTCT  50

seq1  CACTGCACTTCCTCTTTACCATCTAAGGGTTTAACAAGAAAGCCCTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCACTTCCTCTTTACCATCTAAGGGTTTAACAAGAAAGCCCTTTGT  100

seq1  TTTGGCAAAGGAGATGGCTCAGTGAATAAAGTGCTTGGTATGAAAGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAAAGGAGATGGCTCAGTGAATAAAGTGCTTGGTATGAAAGCATA  150

seq1  AGGGCCTGATCTTTATTGCCAGAATCCACACTAAACAACAACAACAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTGATCTTTATTGCCAGAATCCACACTAAACAACAACAACAACAA  200

seq1  CAACAAAACAAACAAACAAACAAAAAACGAACACACACACATACAAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAACAAACAAACAAACAAAAAACGAACACACACACATACAAAACA  250

seq1  ACAACAAAACAACAAACCAGGTAATTGTGACAATAATTCCAGCACTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAACAACAAACCAGGTAATTGTGACAATAATTCCAGCACTAGGA  300

seq1  TGGGAAAGAGATATCTGGGGCTCACCCTAGAACTCCATATCACTGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAGAGATATCTGGGGCTCACCCTAGAACTCCATATCACTGAGAGA  350

seq1  CAGTGTTTAGAAAAATCAAGGTGAATGGAAAATTTGACAATATCCAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTAGAAAAATCAAGGTGAATGGAAAATTTGACAATATCCAAGAC  400

seq1  TGTCCTCTGACTTCTAAATCTAAGCTCCCAAAAATGTATATATATATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTGACTTCTAAATCTAAGCTCCCAAAAATGTATATATATATATG  450

seq1  TCCTCTCACACATCCCAATCTCATTCACTAGTTATCAGTATTTGGTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCACACATCCCAATCTCATTCACTAGTTATCAGTATTTGGTTTTG  500

seq1  AATTTCTTAGCCATGGGAATCACCATGAACTAAATTTATTTTTAACTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTAGCCATGGGAATCACCATGAACTAAATTTATTTTTAACTAAA  550

seq1  TTTCTACATCTAAGGTTTTTAGCTGGACAAAATGGAGTAAGACTAAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACATCTAAGGTTTTTAGCTGGACAAAATGGAGTAAGACTAAGTTT  600

seq1  GCATTTCTATACTGCTCTGAGCAGCTTTCTATGGAGTGTGAAGATTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTATACTGCTCTGAGCAGCTTTCTATGGAGTGTGAAGATTTCAA  650

seq1  ATTCAGGTCCTCATTCTTGTATGGAAAGCTCCTTACTATCTTTACAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGTCCTCATTCTTGTATGGAAAGCTCCTTACTATCTTTACAAGTC  700

seq1  TATCTACTTGGCTAGCTTCTGAGCTGTGCACTTTTGAATTGATCCAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACTTGGCTAGCTTCTGAGCTGTGCACTTTTGAATTGATCCAGAAG  750

seq1  CAATGCTTCTTTAGGGGCCATTAAGTTAGAACAAATATTTTACATGTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTTCTTTAGGGGCCATTAAGTTAGAACAAATATTTTACATGTGAG  800

seq1  AAAGACAAGAACGTTGGGAGTTATGGGGAG-AAGGCT-AAGGTTTTCATA  848
      |||||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  AAAGACAAGAACGTTGGGAGTTATGGGGAGAAAGGCTAAAGGTTTTCATA  850

seq1  TTTTTATTCCATAGAAAATCTGTTTGAAAAAGAAGGAATGAGGGAGGGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTCCATAGAAAATCTGTTTGAAAAAGAAGGAATGAGGGAGGGGC  900

seq1  TACAGAGATGGTTCAGTGG-TTGAGACAAGATATTG-TTGCAGAGTACCA  946
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  TACAGAGATGGTTCAGTGGTTTGAGACAAGATATTGTTTGCAGAGTACCA  950

seq1  GACTTCAGTTCTTAGCATCAGTGCAAGGTGAGAACC--TTCTGTAACTGA  994
      |||||||||||||||||||||||| ||||||  |||  ||||||||||||
seq2  GACTTCAGTTCTTAGCATCAGTGC-AGGTGATGACCCTTTCTGTAACTGA  999

seq1  ACCACAAGGGAACATGGCATCCTTGTCTGGTCTCTGCTGCTACCCTGCAC  1044
      ||||||| ||||||||||||| |||||||||||||||||||| |||||||
seq2  ACCACAA-GGAACATGGCATCGTTGTCTGGTCTCTGCTGCTA-CCTGCAC  1047

seq1  AGTGGTGCATGATGC-ATACACACACATGCATGCATACACAGACACATAT  1093
      ||| ||||||||||| |||| ||||||||||||| | ||  |||||||||
seq2  AGT-GTGCATGATGCAATAC-CACACATGCATGC-TCCA-GGACACATAT  1093

seq1  GC  1095
      ||
seq2  GC  1095