BAC Information

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BAC

Clone NameB6Ng01-287K23
Chromosome1 (Build37)
Map Location 52,885,952 - 52,887,087
singlet/doubletsinglet
Overlap genenone
Upstream geneMyo1b, EG667010, LOC667014, Stat4, LOC100042634, Stat1, Gls, LOC546735, Nab1, LOC546736, Gm553, LOC100042094, EG433305, 5330401P04Rik, 2210010L05Rik, Inpp1
Downstream geneHibch, 1700019D03Rik, Gdf8, 1700019A02Rik, Pms1, LOC671024, Ormdl1, Osgepl1, Asnsd1, EG627858, EG627866, LOC100042162, Dnahc7, Stk17b, Hecw2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287K23.bB6Ng01-287K23.g
ACCGA085540GA085541
length1,2181,132
definitionB6Ng01-287K23.b B6Ng01-287K23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaatagtaaaagcaaaccagtagtcaacatt
aaaccaaatgaagagaaactttaagcaatcccttaattgcttcttaataa
tttcccaaacacacagcagtaacctctggggttacttactgactgattct
caggctggtatcagaattctgtgtatcaatcttggttccgggactccacg
ggacctagaaaatcagtctgaacaggttagagggtgcgccagagaaccgg
acagcttctgggaaaggcggaagcacagagcctctgaggcagcacccttg
gcgggccgcagacagccggccaccatccggaccagaggacaggtgtccgc
ctggctcgggaggcagcctcagcctcaggagcagcggtcgccatcttggt
tccaggactccctggagcttaggaatttagcctgcacaggtgagagtctg
caccacagaagctgacagcttctggggactgccaaaacaacacagcttct
gagaaaggccctgttttgggccttcttcttcgaccaggaggaggtccaaa
aacaagatatctgcgcaccttccctgtaagagagcttgccagcagagagt
gctctgagcactgaaactcagaggagagaatctgtctcccaggtctgctg
agagacggtaacagaatcaccagaagaacaatctctaaacagagtcaact
ataactactaactccagagattaccagatggcgaaaggtaaacgtaggaa
tcctactaacaggaaccaagaccactcaccatcatcagaacccagcactc
ccacttcgcccagtccagggcaccacaacacacccgaaaacctagaccta
gatttaaaagcatatctcatgatgatggtagaggacatcaagaaggactt
taataaatcacttaaagaaatacaggagacactgctaaaggagttacaag
tccttaaagaaaaacaggaaacacatcaaacaggtaggaagtcccttaca
ggaaaaggaggaaaaaacatacaaacaggtgatggaaatgaacaaaccat
actagacctaaaagggaggtggacccataagaaaactcaggtgaggcaac
gctggaaaatggaatccttaggaaaggatctggaacatggattgaccctc
cgccacgaattccagaactgggagagagagacttccagggtctgcggaaa
gattctccttggagggac
gaattcctcatataatgttctggccttatttttctatatgtcaaggaaat
atagatatactatttagtcaaggagcttgtgatgcttctgcattcatgga
atgtacagcagcaagaaggaacactcatttgtgaaattccactagcaata
tagcaacagagcaacccaccctcacatgtcacagacattttcttggtttg
ccttccaattttatgtaacagttctttgagacgggctagcccagactggc
cgggccatacttacagttcctttatctgtttccattgtcccattcaggga
tgcagtgccatagatggcaacactccaaggataactcagtgctaaaaatt
caccttttttggaaatattcttaatatttatttaatgctttcggatgaaa
ttagtttggcattttcagttttttttttcctgattacataatcactgcat
tgtgaagaaaagtttatggagactttgaaaaatgtggggaaaatattaaa
aagaaaacaacctaccatataaactataactgttggtgttttgggtattt
tagtctttgggttttttagtcttctgtgtgcatatatggatttaaaaaaa
agatcactatatattgttttgaaaagtgccctttaatcatcataaaagag
cattttctccaagccaccaaatactcttctgaaagaattttcaatggcat
attagccaatgtgtcctaaggtcaatagccgcagttccagtacagctcta
ggcctttctcgacgcagtcatattctttatatagaattgtatctaatggt
ctcatgcttggcactgcacttagaagctaatgctgcccttgcaaagccct
tgagtttggctcaccagactcatatggtggctcacaactgctggaactcc
agtttcaagtgttctatctgaagcccctgacctctcaaatattggcactc
atcaactttcacccaatatatgtgcataatttgaaaaaatttttgtcact
tcaaactagttgcaactgacattaccccagtactgtgtcttgttcacttg
tctgtactagtaatccaggcctccacacttagaaagcctgaagttgacct
tgctaagtttcaccaaggtgaatgctcagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_52885952_52887087
seq2: B6Ng01-287K23.g_66_1197

seq1  GAATTCCTCATATAATGTTCTGGCCTTATTTTTCTATATGTCAAGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATATAATGTTCTGGCCTTATTTTTCTATATGTCAAGGAAAT  50

seq1  ATAGATATACTATTTAGTCAAGGAGCTTGTGATGCTTCTGCATTCATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATACTATTTAGTCAAGGAGCTTGTGATGCTTCTGCATTCATGGA  100

seq1  ATGTACAGCAGCAAGAAGGAACACTCATTTGTGAAATTCCACTAGCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGCAGCAAGAAGGAACACTCATTTGTGAAATTCCACTAGCAATA  150

seq1  TAGCAACAGAGCAACCCACCCTCACATGTCACAGACATTTTCTTGGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACAGAGCAACCCACCCTCACATGTCACAGACATTTTCTTGGTTTG  200

seq1  CCTTCCAATTTTATGTAACAGTTCTTTGAGACGGGCTAGCCCAGACTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAATTTTATGTAACAGTTCTTTGAGACGGGCTAGCCCAGACTGGC  250

seq1  CGGGCCATACTTACAGTTCCTTTATCTGTTTCCATTGTCCCATTCAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCATACTTACAGTTCCTTTATCTGTTTCCATTGTCCCATTCAGGGA  300

seq1  TGCAGTGCCATAGATGGCAACACTCCAAGGATAACTCAGTGCTAAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGCCATAGATGGCAACACTCCAAGGATAACTCAGTGCTAAAAATT  350

seq1  CACCTTTTTTGGAAATATTCTTAATATTTATTTAATGCTTTCGGATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTTTGGAAATATTCTTAATATTTATTTAATGCTTTCGGATGAAA  400

seq1  TTAGTTTGGCATTTTCAGTTTTTTTTTTCCTGATTACATAATCACTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTGGCATTTTCAGTTTTTTTTTTCCTGATTACATAATCACTGCAT  450

seq1  TGTGAAGAAAAGTTTATGGAGACTTTGAAAAATGTGGGGAAAATATTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGAAAAGTTTATGGAGACTTTGAAAAATGTGGGGAAAATATTAAA  500

seq1  AAGAAAACAACCTACCATATAAACTATAACTGTTGGTGTTTTGGGTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAACCTACCATATAAACTATAACTGTTGGTGTTTTGGGTATTT  550

seq1  TAGTCTTTGGGTTTTTTAGTCTTCTGTGTGCATATATGGATTTAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTGGGTTTTTTAGTCTTCTGTGTGCATATATGGATTTAAAAAAA  600

seq1  AGATCACTATATATTGTTTTGAAAAGTGCCCTTTAATCATCATAAAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTATATATTGTTTTGAAAAGTGCCCTTTAATCATCATAAAAGAG  650

seq1  CATTTTCTCCAAGCCACCAAATACTCTTCTGAAAGAATTTTCAATGGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTCCAAGCCACCAAATACTCTTCTGAAAGAATTTTCAATGGCAT  700

seq1  ATTAGCCAATGTGTCCTAAGGTCAATAGCCGCAGTTCCAGTACAGCTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCAATGTGTCCTAAGGTCAATAGCCGCAGTTCCAGTACAGCTCTA  750

seq1  GGCCTTTCTCGACGCAGTCATATTCTTTATATAGAATTGTATCTAATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCTCGACGCAGTCATATTCTTTATATAGAATTGTATCTAATGGT  800

seq1  CTCATGCTTGGCACTGCACTTAGAAGCTAATGCTGCCCTTGCAAAGCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCTTGGCACTGCACTTAGAAGCTAATGCTGCCCTTGCAAAGCCCT  850

seq1  TGAGTTTGGCTCACCAGACTCATATGGTGGCTCACAACTGCTGGAACTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGGCTCACCAGACTCATATGGTGGCTCACAACTGCTGGAACTCC  900

seq1  AGTTCCAAGTGGTCTATCTGAAGCCCCTGACCTCTCAAATATTGGCACTC  950
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAGTGTTCTATCTGAAGCCCCTGACCTCTCAAATATTGGCACTC  950

seq1  ATCAACTTCCACCCCAATATATGTGCATAATTTGAAAAAAATTATGTCAC  1000
      |||||||| || |||||||||||||||||||||||||||| || ||||||
seq2  ATCAACTTTCA-CCCAATATATGTGCATAATTTGAAAAAATTTTTGTCAC  999

seq1  TTCAAACTAGTTGCAAACTGACCAATTACCCCAAGTACTGTGTCCTTGTC  1050
      |||||||||||||| |||||||  |||||||| ||||||||||| |  ||
seq2  TTCAAACTAGTTGC-AACTGAC--ATTACCCC-AGTACTGTGTCTTGTTC  1045

seq1  AC-TGTCTGTACCTAGTAATTCAAG-CTCAACACTTAGAAAGCTTGAAG-  1097
      || |||||||| |||||||| || | ||| ||||||||||||| ||||| 
seq2  ACTTGTCTGTA-CTAGTAATCCAGGCCTCCACACTTAGAAAGCCTGAAGT  1094

seq1  TGACTTTGGCTATGGTTCACC-AGGTGAATGCTTCAGCAT  1136
      |||| || |||| | |||||| |||||||||| |||||||
seq2  TGACCTT-GCTAAGTTTCACCAAGGTGAATGC-TCAGCAT  1132