BAC Information

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BAC

Clone NameB6Ng01-288C09
Chromosome1 (Build37)
Map Location 149,299,928 - 149,300,969
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288C09.bB6Ng01-288C09.g
ACCGA085887GA085888
length1,0541,171
definitionB6Ng01-288C09.b B6Ng01-288C09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgatgttcccacccgacaaactttgtaagcagagaagaagc
ttcaatggactccttgtgggtcatctaatttatattaggtttccatgtaa
ggttttgaaaatgacaatgtagtgatagtagacagaggagataaccacac
ttgaaaaccactttcaatagaagaacaataatggattacagtagtaatag
ttttgtctactgtttcataaagcattacaccggacatgtggaaaagggag
gaggggaagggtgataaggggaaagaaccgttgttattctgaagtgtatg
aggaacactagagaattataccacacataccatgcatgaggaagctgact
tataatatctggtttatagttctgctatgattatcatgtttatgttagat
ctgtccttaagtagctgggtccagattacatccattttcttcattatgtt
tttggatatttctctcatttatttcactaatgggaattttattttcatca
aatacaagaatatcattaaagaggttctaagggtcttcagatatatatga
attacaaacatacataaagccagaaggaagggcacatgccatcaatgcca
tacgttaaggatactgataaggatcatttaatccagtgtatgagcagaga
tgccaataatttctgacagtaaggagcagtacttttactaaagttctata
ctaaattgttaaactgctttaaaggcaggggcataccctaccagggagaa
gaaggatatgtagtccaaaatgttataactcatgaaaattaactatacat
tttcagatatgaaagtattaacaagagcaagaagatgtagcttaaaataa
aacatcacttgcaatatttaacctttttaaattaattatttaaacttaca
tttaatttgcacatatatttataaattcaatcataaggcaaaatcaagtt
tattgagagtaatgtacttaattattttttttttctttccttgtgatttc
agaatcatgaggaaggaaagtgagtgataaaccataaacacagttactat
ggtt

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgaggtttttgtcttt
gagtttgtttatataatggattactttgatggaatttcgtatattaaacc
atcccagcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggatttggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttttggctgggagactattaataactgcttgtattt
ctttaggggatatgggactgtttagaaggtcaacatgatcctgattcaac
tttggtacctggtatctgtccagaaatttgtccattttgtccaggttttc
cagttttgttgagtatagccttttgtagaaggatctgatggtgttttgga
tttcttcaggatctgttgttatgtctcccttttcagtactgattttgtta
attaggattttgtccctgtgccctctagtgagtctagctaagggtttatc
tatcttgttgattttctcaaagaaccaactccttgtttggttaattcttt
tgaatagatcttcttgtttccacttggttgatatcacccctgagtttgat
tatttcctggcttctactcctcttgggtgaattgcttcctttttttctag
agcttttagatgtgttctcaagctgctagtatgtgctctctcccgtttct
tcttggaggcactcagagctatgagtttccctctagaaatgcttcattgg
tgtcccaagttgggtacgtgtgaatcatttcataactctaaaagtctaat
tctttcttatctcccttgaccaaagtatacatgagagatgtgctcagttc
cccaccgtgatgttgccttcggtactatctttgtatgtgagagaactgac
accgcatagatgacctagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149299928_149300969
seq2: B6Ng01-288C09.b_46_1091 (reverse)

seq1  TAACTGTGTTTAT-GTTTATCACTCACTTTCCCTCCTCATGATTCTGAAA  49
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TAACTGTGTTTATGGTTTATCACTCACTTTCCTTCCTCATGATTCTGAAA  50

seq1  TCACAA-GAAAG--AAAAAAAATATGTAAGTACATTACTCTCAATAAACT  96
      |||||| |||||  ||||||||||  ||||||||||||||||||||||||
seq2  TCACAAGGAAAGAAAAAAAAAATAATTAAGTACATTACTCTCAATAAACT  100

seq1  TGATTTTGCCTTATGATTGAATTTATAAATATATGTGCAAATTAAATGTA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGCCTTATGATTGAATTTATAAATATATGTGCAAATTAAATGTA  150

seq1  AGTTTAAATAATTAATTTAAAAAGGTTAAATATTGCAAGTGATGTTTTAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAATAATTAATTTAAAAAGGTTAAATATTGCAAGTGATGTTTTAT  200

seq1  TTTAAGCTACATCTTCTTGCTCTTGTTAATACTTTCATATCTGAAAATGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCTACATCTTCTTGCTCTTGTTAATACTTTCATATCTGAAAATGT  250

seq1  ATAGTTAATTTTCATGAGTTATAACATTTTGGACTACATATCCTTCTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAATTTTCATGAGTTATAACATTTTGGACTACATATCCTTCTTCT  300

seq1  CCCTGGTAGGGTATGCCCCTGCCTTTAAAGCAGTTTAACAATTTAGTATA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTAGGGTATGCCCCTGCCTTTAAAGCAGTTTAACAATTTAGTATA  350

seq1  GAACTTTAGTAAAAGTACTGCTCCTTACTGTCAGAAATTATTGGCATCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTAGTAAAAGTACTGCTCCTTACTGTCAGAAATTATTGGCATCTC  400

seq1  TGCTCATACACTGGATTAAATGATCCTTATCAGTATCCTTAACGTATGGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATACACTGGATTAAATGATCCTTATCAGTATCCTTAACGTATGGC  450

seq1  ATTGATGGCATGTGCCCTTCCTTCTGGCTTTATGTATGTTTGTAATTCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGGCATGTGCCCTTCCTTCTGGCTTTATGTATGTTTGTAATTCAT  500

seq1  ATATATCTGAAGACCCTTAGAACCTCTTTAATGATATTCTTGTATTTGAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTGAAGACCCTTAGAACCTCTTTAATGATATTCTTGTATTTGAT  550

seq1  GAAAATAAAATTCCCATTAGTGAAATAAATGAGAGAAATATCCAAAAACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAATTCCCATTAGTGAAATAAATGAGAGAAATATCCAAAAACA  600

seq1  TAATGAAGAAAATGGATGTAATCTGGACCCAGCTACTTAAGGACAGATCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGAAAATGGATGTAATCTGGACCCAGCTACTTAAGGACAGATCT  650

seq1  AACATAAACATGATAATCATAGCAGAACTATAAACCAGATATTATAAGTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAACATGATAATCATAGCAGAACTATAAACCAGATATTATAAGTC  700

seq1  AGCTTCCTCATGCATGGTATGTGTGGTATAATTCTCTAGTGTTCCTCATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTCATGCATGGTATGTGTGGTATAATTCTCTAGTGTTCCTCATA  750

seq1  CACTTCAGAATAACAACGGTTCTTTCCCCTTATCACCCTTCCCCTCCTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAGAATAACAACGGTTCTTTCCCCTTATCACCCTTCCCCTCCTCC  800

seq1  CTTTTCCACATGTCCGGTGTAATGCTTTATGAAACAGTAGACAAAACTAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCACATGTCCGGTGTAATGCTTTATGAAACAGTAGACAAAACTAT  850

seq1  TACTACTGTAATCCATTATTGTTCTTCTATTGAAAGTGGTTTTCAAGTGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTGTAATCCATTATTGTTCTTCTATTGAAAGTGGTTTTCAAGTGT  900

seq1  GGTTATCTCCTCTGTCTACTATCACTACATTGTCATTTTCAAAACCTTAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCTCCTCTGTCTACTATCACTACATTGTCATTTTCAAAACCTTAC  950

seq1  ATGGAAACCTAATATAAATTAGATGACCCACAAGGAGTCCATTGAAGCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAACCTAATATAAATTAGATGACCCACAAGGAGTCCATTGAAGCTT  1000

seq1  CTTCTCTGCTTACAAAGTTTGTCGGGTGGGAACATCAGTGGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGCTTACAAAGTTTGTCGGGTGGGAACATCAGTGGAATTC  1046


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