BAC Information

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BAC

Clone NameB6Ng01-288O17
Chromosome1 (Build37)
Map Location 127,273,370 - 127,274,453
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288O17.bB6Ng01-288O17.g
ACCGA086459GA086460
length1,0131,085
definitionB6Ng01-288O17.b B6Ng01-288O17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttgagctctgtaccccatttttatggggtcatttggtttt
ctggagtccaacttcttgagttctttgtatacattggatattagccctct
attagatttaggattggtaaagatcttttcccaatctgttggttgccttt
ttgtcttattggcagtgccctttgtcttacagaagctttgcagttttatg
aggtcccatttggttttttttttcattttttagtagatattttcttcatt
tacatttcaaatgctatccgaaagtcccctataccctccctctgccctgc
tcctacccacccactcctacttcttggccctggcgttcccctgtactggg
gcatataaagtttgcaataccaaggggtctctcttcccaatgatggccga
ctaggccatcttctgctacatatgcaggtagagacataagctctgggggt
actggttagttcatattgttgtcccacctatagggttgcagaccccttca
gctccttgggtactttctctagctcctccattggggccctgtgtttcatc
caataggtgactgtgagcatctacttctgtatttgccaggcactgcatag
cctcacaagagacagctatatcagggtcctttcagaaaaatcttgctggc
aaatgcactactacagcacaagccatttgtactggctagttttgtgtcaa
cttgacacagctggagttatcacagagaaaggagcttcagttggggaaat
gcctccatgagatccaactataaggcattctctcaattagtgatcaaggg
ggaaaggccccttgtggtgggactatctctgggctggtagtcttgattct
ataagagagcaggctgagcaagccaggggaagcaagccagtaaagaacat
ccctccgtggcctctgatcagctcctgctccctgaccagctgagtccagt
cctgacatccttggtcataaacagcaatgtggaaatgtaagctggaataa
acccttcctcccc
gaattcagtttgttaagctcggtgacaagtcccttttactgcccagtccc
ttcatgtgaagacaagacttgctttcctagcacacaagaagccatggatt
ccagcccttggcttccaactggatgtgatggtatgcatctgtaactccat
cgcttgatgggtagaggcaggaggaccaggagttcaaccttattgccagg
ctggcaagatggctcagcagataaaggcgctttctgtgcatgcctgagtt
tgctccctggaacacacagcatgaggagagaacagattcccccaaagtgt
tttctgacgctttttgtgctctgtggcgtgttctctcaaccacaagcata
cacactactactactactactactactactactactactactactactac
tactactacataaattcaattcaattaatcaaggtcatccttggctgctt
agtgatttcaaggccattctgagatacaggagagcctgtctcaaaactaa
taagaaaacaaaagcaaagataacaagatgagattgaagtccctgttgtc
cacggtgaagctcatccagatgtcaagcaagtaccaggatgaagagttcc
taggggtagagaagatccagcccttactcggctcgctgctgagacacgag
gagtattcacttcccacaatcccatgttcacagcatggtgttttcatccc
atctgacaaaggggcagctggggtagagtctcggtggtcaaggtgttgtt
caaggtgtcccatgatagtcacttttacatggctgagacaaatcaccatg
atcagaggaaagttgttttagtcactgtctgtgaagtgactccatgacca
tgacagctttttataaaagaaataatttaactgaggattgtgtacagttt
cagaagtttagcccattttcatccatcatggtgggaagcatggcagccct
tggtgctggagagtagctgagaattctacattcaatctgcaaatacagaa
gagagagacaccgggcctgggcttgagattttggaaacctaaggctactc
ccgtttgtggaggaaggtggtgttacttcctccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_127273370_127274453
seq2: B6Ng01-288O17.g_69_1153 (reverse)

seq1  TTGGAGGAAGTAACA-CACC-TCCTCCACAAA-GGGAGTAGGCTTTAGGT  47
      ||||||||||||||| |||| ||||||||||| ||||||| || ||||||
seq2  TTGGAGGAAGTAACACCACCTTCCTCCACAAACGGGAGTA-GCCTTAGGT  49

seq1  TTTCAAAATCTCAAG-CCAGGCCCGGTGTCTCTCTCTTTCTGTTATTTGC  96
      || |||||||||||| |||||||||||||||||||| ||||| |||||||
seq2  TTCCAAAATCTCAAGCCCAGGCCCGGTGTCTCTCTC-TTCTG-TATTTGC  97

seq1  AGATTTGAATGTAGAATTCTCAGCTACTTCTCCAGCACCAA-GGCTGCCA  145
      ||| ||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  AGA-TTGAATGTAGAATTCTCAGCTAC-TCTCCAGCACCAAGGGCTGCCA  145

seq1  TGCTTCCCACCATGATGGATGAAAATGGGCTAAACTTCTGAAACTGTACA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCACCATGATGGATGAAAATGGGCTAAACTTCTGAAACTGTACA  195

seq1  CAATCCTCAGTTAAATTATTTCTTTTAT-AAAAGCTGTCATGGTCATGGA  244
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAATCCTCAGTTAAATTATTTCTTTTATAAAAAGCTGTCATGGTCATGGA  245

seq1  GTCACTTCACAGACAGTGACTAAAACAACTTTCCTCTGATCATGGTGATT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTCACAGACAGTGACTAAAACAACTTTCCTCTGATCATGGTGATT  295

seq1  TGTCTCAGCCATGTAAAAGTGACTATCATGGGACACCTTGAACAACACCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGCCATGTAAAAGTGACTATCATGGGACACCTTGAACAACACCT  345

seq1  TGACCACCGAGACTCTACCCCAGCTGCCCCTTTGTCAGATGGGATGAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACCGAGACTCTACCCCAGCTGCCCCTTTGTCAGATGGGATGAAAA  395

seq1  CACCATGCTGTGAACATGGGATTGTGGGAAGTGAATACTCCTCGTGTCTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGCTGTGAACATGGGATTGTGGGAAGTGAATACTCCTCGTGTCTC  445

seq1  AGCAGCGAGCCGAGTAAGGGCTGGATCTTCTCTACCCCTAGGAACTCTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCGAGCCGAGTAAGGGCTGGATCTTCTCTACCCCTAGGAACTCTTC  495

seq1  ATCCTGGTACTTGCTTGACATCTGGATGAGCTTCACCGTGGACAACAGGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGTACTTGCTTGACATCTGGATGAGCTTCACCGTGGACAACAGGG  545

seq1  ACTTCAATCTCATCTTGTTATCTTTGCTTTTGTTTTCTTATTAGTTTTGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATCTCATCTTGTTATCTTTGCTTTTGTTTTCTTATTAGTTTTGA  595

seq1  GACAGGCTCTCCTGTATCTCAGAATGGCCTTGAAATCACTAAGCAGCCAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCTCTCCTGTATCTCAGAATGGCCTTGAAATCACTAAGCAGCCAA  645

seq1  GGATGACCTTGATTAATTGAATTGAATTTATGTAGTAGTAGTAGTAGTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACCTTGATTAATTGAATTGAATTTATGTAGTAGTAGTAGTAGTAG  695

seq1  TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTGTGTATGCTTGTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTGTGTATGCTTGTG  745

seq1  GTTGAGAGAACACGCCACAGAGCACAAAAAGCGTCAGAAAACACTTTGGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGAACACGCCACAGAGCACAAAAAGCGTCAGAAAACACTTTGGG  795

seq1  GGAATCTGTTCTCTCCTCATGCTGTGTGTTCCAGGGAGCAAACTCAGGCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTGTTCTCTCCTCATGCTGTGTGTTCCAGGGAGCAAACTCAGGCA  845

seq1  TGCACAGAAAGCGCCTTTATCTGCTGAGCCATCTTGCCAGCCTGGCAATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGAAAGCGCCTTTATCTGCTGAGCCATCTTGCCAGCCTGGCAATA  895

seq1  AGGTTGAACTCCTGGTCCTCCTGCCTCTACCCATCAAGCGATGGAGTTAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGAACTCCTGGTCCTCCTGCCTCTACCCATCAAGCGATGGAGTTAC  945

seq1  AGATGCATACCATCACATCCAGTTGGAAGCCAAGGGCTGGAATCCATGGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCATACCATCACATCCAGTTGGAAGCCAAGGGCTGGAATCCATGGC  995

seq1  TTCTTGTGTGCTAGGAAAGCAAGTCTTGTCTTCACATGAAGGGACTGGGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGTGCTAGGAAAGCAAGTCTTGTCTTCACATGAAGGGACTGGGC  1045

seq1  AGTAAAAGGGACTTGTCACCGAGCTTAACAAACTGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGGGACTTGTCACCGAGCTTAACAAACTGAATTC  1085