BAC Information

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BAC

Clone NameB6Ng01-288P23
Chromosome1 (Build37)
Map Location 180,283,817 - 180,284,909
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp238, EG631449, LOC100040770, 1700016C15Rik, Adss, EG631584, EG545391, LOC666262, 5830417C01Rik, LOC666284, 4930527J03Rik, LOC666295, B230369F24Rik, LOC669454, 2310005N03Rik, Hnrpu
Downstream geneEfcab2, D230039L06Rik, Kif26b, Smyd3, LOC666354
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288P23.bB6Ng01-288P23.g
ACCGA086516GA086517
length1,1941,103
definitionB6Ng01-288P23.b B6Ng01-288P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
aaatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggaatgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagttctaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcctcatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacactcatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgcagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggaatggatcatagggctccc
aatggaggagctagagaaagtagccaaggagctaaaagggatctgcaacc
ctataggtggaacaacattatgaactaaccagtaccccgggagcttcttg
actctagctgcatatatatcaaaaagatggccttagtccgccatcactgg
gaaagaagaggccattgacctggccaacttttatatgctccaagtacagg
acccaagacctaaaggggagtgtggccaggggaatgtggtggct
gaattcaacatggtcatgagccgctgtgtggctgctgagactcaaaccca
cagtttctaggtgagcagccactgtttttaactgctgagacatctctcta
gccctccctgaacccagaacttaacaaacctgttagaatgactgcccagc
aagttccagggatccttctatctttgcctcactgcccctgggagcactag
caggagcacctctcctagctgtttacatgagttctcaggatctgacccca
ggttgtcatgcttgcatgggaagtcacctccccagcacgtatgcctgagt
cttgacctattcagtcacttgctccagaaatcagcttctggattcttggg
gcaagggcattttccttctggctgcatagaaaagataaagctaaatggtg
ggaattctattacatctttcaaaacagctcctcagttcccacaacactca
gcagaagttggtcctttctgtctctgatcattttcaaggagccatcctcc
tctgacctagaatcaccaacccactccaacccactctcttcataagccag
actctcacctgattccactgtcacaaaacatacagtcttattctgaccat
tttgttctttgtttatgtttctttctgtagtgtctttattattttttgga
gcatttcaaacatgcatacaatgtattttggtatactgaagcttctccca
tgctcccccaacccctcttaagcccaccctaccttcactcccaaagtcaa
atcctttttcaatgtgttattattcattgtgtgatagttttttgtttgtt
ttcttttaccctatatggttagttccatctctctctgtctctctgtctct
ctctctgtctctgtctctctctctctttctcacacacacacacacacaca
cacacacacacacacacagcacacacacatttttgacaacactttcagga
ggccactgaaaagaaacccaacattgtctgaccttgactctgtcatgtcc
tcttgtttgttgagacaggtttacacagtaacttccaagctggtctccag
acgctctgtaccctgagatgaagacctttgaaccttctggatactccctc
ttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_180283817_180284909
seq2: B6Ng01-288P23.g_71_1173

seq1  GAATTCAACATGGTCATGAGCCGCTGTGTGGCTGCTGAGACTCAAACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATGGTCATGAGCCGCTGTGTGGCTGCTGAGACTCAAACCCA  50

seq1  CAGTTTCTAGGTGAGCAGCCACTGTTTTTAACTGCTGAGACATCTCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTAGGTGAGCAGCCACTGTTTTTAACTGCTGAGACATCTCTCTA  100

seq1  GCCCTCCCTGAACCCAGAACTTAACAAACCTGTTAGAATGACTGCCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCCTGAACCCAGAACTTAACAAACCTGTTAGAATGACTGCCCAGC  150

seq1  AAGTTCCAGGGATCCTTCTATCTTTGCCTCACTGCCCCTGGGAGCACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCAGGGATCCTTCTATCTTTGCCTCACTGCCCCTGGGAGCACTAG  200

seq1  CAGGAGCACCTCTCCTAGCTGTTTACATGAGTTCTCAGGATCTGACCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCACCTCTCCTAGCTGTTTACATGAGTTCTCAGGATCTGACCCCA  250

seq1  GGTTGTCATGCTTGCATGGGAAGTCACCTCCCCAGCACGTATGCCTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCATGCTTGCATGGGAAGTCACCTCCCCAGCACGTATGCCTGAGT  300

seq1  CTTGACCTATTCAGTCACTTGCTCCAGAAATCAGCTTCTGGATTCTTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCTATTCAGTCACTTGCTCCAGAAATCAGCTTCTGGATTCTTGGG  350

seq1  GCAAGGGCATTTTCCTTCTGGCTGCATAGAAAAGATAAAGCTAAATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGCATTTTCCTTCTGGCTGCATAGAAAAGATAAAGCTAAATGGTG  400

seq1  GGAATTCTATTACATCTTTCAAAACAGCTCCTCAGTTCCCACAACACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTATTACATCTTTCAAAACAGCTCCTCAGTTCCCACAACACTCA  450

seq1  GCAGAAGTTGGTCCTTTCTGTCTCTGATCATTTTCAAGGAGCCATCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGTTGGTCCTTTCTGTCTCTGATCATTTTCAAGGAGCCATCCTCC  500

seq1  TCTGACCTAGAATCACCAACCCACTCCAACCCACTCTCTTCATAAGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTAGAATCACCAACCCACTCCAACCCACTCTCTTCATAAGCCAG  550

seq1  ACTCTCACCTGATTCCACTGTCACAAAACATACAGTCTTATTCTGACCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCACCTGATTCCACTGTCACAAAACATACAGTCTTATTCTGACCAT  600

seq1  TTTGTTCTTTGTTTATGTTTCTTTCTGTAGTGTCTTTATTATTTTTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTGTTTATGTTTCTTTCTGTAGTGTCTTTATTATTTTTTGGA  650

seq1  GCATTTCAAACATGCATACAATGTATTTTGGTATACTGAAGCTTCTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCAAACATGCATACAATGTATTTTGGTATACTGAAGCTTCTCCCA  700

seq1  TGCTCCCCCAACCCCTCTTAAGCCCACCCTACCTTCACTCCCAAAGTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCCAACCCCTCTTAAGCCCACCCTACCTTCACTCCCAAAGTCAA  750

seq1  ATCCTTTTTCAATGTGTTATTATTCATTGTGTGATAGTTTTTTGTTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTTCAATGTGTTATTATTCATTGTGTGATAGTTTTTTGTTTGTT  800

seq1  TTCTTTTACCCTATATGGTTAGTTCCATCTCTCTCTGTCTCTCTGTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTACCCTATATGGTTAGTTCCATCTCTCTCTGTCTCTCTGTCTCT  850

seq1  CTCTCTGTCTCTGTCTCTCTCTCTCTTTCTCACACACACACACACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTCTGTCTCTCTCTCTCTTTCTCACACACACACACACACACA  900

seq1  CACACACACACACACACA-CACACACACA-TTTTGACAACAC-TTCAGGA  947
      |||||||||||||||||| |||||||||| |||||||||||| |||||||
seq2  CACACACACACACACACAGCACACACACATTTTTGACAACACTTTCAGGA  950

seq1  GGCCACTG-AAAGAAA-CCAACATTGTCTGACCTTGACTCTGTCATGTCC  995
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  GGCCACTGAAAAGAAACCCAACATTGTCTGACCTTGACTCTGTCATGTCC  1000

seq1  TCTTGTTTGTTTGAGACAAGGTTTTACACAGTAACT--CAAGCTGGTCT-  1042
      ||||||||| ||||||||  | ||||||||||||||  ||||||||||| 
seq2  TCTTGTTTG-TTGAGACA--GGTTTACACAGTAACTTCCAAGCTGGTCTC  1047

seq1  CAGACGCTCTGTA-CCTGAGGATG-AGACC-TTGAA-CTTCT-GATACT-  1086
      ||||||||||||| ||||| |||| ||||| ||||| ||||| |||||| 
seq2  CAGACGCTCTGTACCCTGA-GATGAAGACCTTTGAACCTTCTGGATACTC  1096

seq1  CCTCTTT  1093
      |||||||
seq2  CCTCTTT  1103