BAC Information

Click to search

BAC

Clone NameB6Ng01-289E04
Chromosome1 (Build37)
Map Location 148,943,323 - 148,944,001
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289E04.bB6Ng01-289E04.g
ACCGA086712GA086713
length1,0011,174
definitionB6Ng01-289E04.b B6Ng01-289E04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaaaattctagcacaaaacaagagaaacatataatgacactg
aactacggccaagacaagatagacaaatgatattttgaaatttttgaaag
cagagaaattttatgtaatgtattagggtaaagtctcacattgaagaact
tgagtttaaaagctacaatttgaggagtttgtcacaatgtatacagtgtt
tacataactcaaaagaagaagaagaacaaacctataaggacctgaataaa
tgcttgtaagcaaatcaatccatctttattctaaagaaagtttatcaatg
caaattcctgaaaaagtgtttaacatgtggaatccttaataaattccaca
gtgatattccatcacagtgcagctagaatgtctgttttcaacaatataca
aggataagtgtagacaatgatgtgaagaacacagaacgtcagcatgctgt
tggtgttaatggaaatcaaggtagctttttatggaagcaatttgaaaata
tgtcaaaattaaaagacagggcatcaagtgaggaatggggttgccatctc
acagccaaagctctgacctataatttttcctgtctgaaagaattgtaggg
ataggaatggagaagaccctgacaaaagaaggtccagcaacaggctcaaa
ttgggatccagatcaaggggaggtcccaaggcctgacactatttctaaga
caatggagcgctcacaaaaagtgacctagtatgaccacactctagaagac
ccaacaagcagctgaaacagtcagatgcagatatttgcacccaactacct
gacagaagctgctgactctgttggtgaattactggaaagttagaagaagc
tgaggaagagagagaccctgtaagaggaccagcagtctcaattaacctgg
acctctgagatctcacagacactgggaccaccaaccagacaacatacatc
agctgacataaggctcccaacatatataaagcagagggatgtagggtctg
g

gaattctcccctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaatccttcgat
ttcacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggagaagatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtagttcctca
taaaattggacatagtactactggaggatcccgtaataccactcctgggc
atatatccagaaaatgttccaactggaaagaaggacaattgctccactat
gttcatagcagctttatttataatagccagaagctggaaagtacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaggaatgaatttatgaaattcctaggcaa
atggatgcacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcgctgataagtggattttagcccagaaac
ttagaatacccaagatataagatacaattttcaaaacacatgaaactcaa
gaagaatgaagatcaaagtgtggacacttagccccttcatagaattagga
acaaaacacccatgaaaggagttacagagacaaagtttggagctaagatg
aaaggatggaccatctagagactgccatacctggggacccatcccataat
ctgcctccaaacgctgacaccattgcacacactagcaagattttgctgaa
aggacccagatagagatgtctcttgtgagaccatgctggggcctagtaaa
cacagaaatggatgctcacagtcaggtattgaatggatcacaggttctcc
aatggaggagctagagatagtacccaaggagctaaggggtctgcacccta
tagtagacacatatgaactaacccgtaatcccggactcgttcctctagct
gcgtatgttatcagagatggcctagttcaccattcattgaagagaggtcc
attgttcttgccacctttatatgcttcagtacaggacgcccaaggcctag
aaaggtggcaggtgagatttgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148943323_148944001
seq2: B6Ng01-289E04.b_44_722

seq1  GAATTCATCAAAATTCTAGCACAAAACAAGAGAAACATATAATGACACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAAAATTCTAGCACAAAACAAGAGAAACATATAATGACACTG  50

seq1  AACTACGGCCAAGACAAGATAGACAAATGATATTTTGAAATTTTTGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACGGCCAAGACAAGATAGACAAATGATATTTTGAAATTTTTGAAAG  100

seq1  CAGAGAAATTTTATGTAATGTATTAGGGTAAAGTCTCACATTGAAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATTTTATGTAATGTATTAGGGTAAAGTCTCACATTGAAGAACT  150

seq1  TGAGTTTAAAAGCTACAATTTGAGGAGTTTGTCACAATGTATACAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTAAAAGCTACAATTTGAGGAGTTTGTCACAATGTATACAGTGTT  200

seq1  TACATAACTCAAAAGAAGAAGAAGAACAAACCTATAAGGACCTGAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAACTCAAAAGAAGAAGAAGAACAAACCTATAAGGACCTGAATAAA  250

seq1  TGCTTGTAAGCAAATCAATCCATCTTTATTCTAAAGAAAGTTTATCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTAAGCAAATCAATCCATCTTTATTCTAAAGAAAGTTTATCAATG  300

seq1  CAAATTCCTGAAAAAGTGTTTAACATGTGGAATCCTTAATAAATTCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCTGAAAAAGTGTTTAACATGTGGAATCCTTAATAAATTCCACA  350

seq1  GTGATATTCCATCACAGTGCAGCTAGAATGTCTGTTTTCAACAATATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATATTCCATCACAGTGCAGCTAGAATGTCTGTTTTCAACAATATACA  400

seq1  AGGATAAGTGTAGACAATGATGTGAAGAACACAGAACGTCAGCATGCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGTGTAGACAATGATGTGAAGAACACAGAACGTCAGCATGCTGT  450

seq1  TGGTGTTAATGGAAATCAAGGTAGCTTTTTATGGAAGCAATTTGAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTAATGGAAATCAAGGTAGCTTTTTATGGAAGCAATTTGAAAATA  500

seq1  TGTCAAAATTAAAAGACAGGGCATCAAGTGAGGAATGGGGTTGCCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAATTAAAAGACAGGGCATCAAGTGAGGAATGGGGTTGCCATCTC  550

seq1  ACAGCCAAAGCTCTGACCTATAATTTTTCCTGTCTGAAAGAATTGTAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAAAGCTCTGACCTATAATTTTTCCTGTCTGAAAGAATTGTAGGG  600

seq1  ATAGGAATGGAGAAGACCCTGACAAAAGAAGGTCCAGCAACAGGCTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAATGGAGAAGACCCTGACAAAAGAAGGTCCAGCAACAGGCTCAAA  650

seq1  TTGGGATCCAGATCAAGGGGAGGTCCCAA  679
      |||||||||||||||||||||||||||||
seq2  TTGGGATCCAGATCAAGGGGAGGTCCCAA  679


| Home | SequenceCutter | Blast | Download |