BAC Information

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BAC

Clone NameB6Ng01-289O04
Chromosome1 (Build37)
Map Location 149,951,310 - 149,952,481
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289O04.bB6Ng01-289O04.g
ACCGA087165GA087166
length1,1761,166
definitionB6Ng01-289O04.b B6Ng01-289O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatctgaggaataccgaatggctgaaaatcacctaaaaaagtg
ttcagcatccttaatcatgagggaaatgcaaatcataacaaccctgagat
gccacctcacaccagccataatggttaagataaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattgggtatagtagtaccgaaggatcccacaatacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttttaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaggaaatgtggtacacttacacaatg
ttgtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
ataaatggacctggagggcatcatcctgagtgagttaacccaatcccaaa
agaactcacatgatatgtactcactgataagtggatattagttcagaaag
ttagaacacccaggatacaagatacaattttcagaacacatgaaactcaa
gaagagcaaagacaaaagtgtggacactttgttccttcttagaattggga
acaaaacacccatgaaaggatttacagagacaaagattggagctgaggcg
aaaggatgcaccatctagagactgctatacccggggatccatcacataat
tagcctctaaacgctgacaccattgcacacactagcaagattttgctgaa
agtaccctgatatagctgtctcttgtgaggctatgctgaggactagcaaa
tgcagaagtgtatgcctcccggtcagttattggatggatcacagggcccc
aaaggaggagctagagaaagtacccaaggagctaaaggggtctgcaccgt
atagtgacacattatgactacagtaccccccggagctcgtgtgtctagct
gcatatgtttaggaaggtgactagtgcatcaatagaagaaggccatgatg
tgcaaactcatatgcttcagtaagtaatgccaggtccatatggaatgcaa
ggacgtgcgagctatacttcatgtat
gaattcaaaggaagtatgagatgaaaaacagtcagagggtggaccagtag
ggggataatgacttggctgtaaaacaataaagaataataacttttaaaaa
gttaacatttttcactgaagatttaagagctttgtaggattatcttttct
caaacttttctagtgttcatttatgtcttgcaactcgtggacttggtaaa
cttttaatatctttttcttaacatctccacatatattagtttttgtgata
ttataatagtatattagaatcttacaagtgtacattatagttaaatgtta
agcataataattatctgtaaattagccaattacagttttcagtgttgaca
atggaactctgggcctttagcatggtagtaaagcattgtactcctgacca
gtaccatcagcctgctacctatatatcttaggtaaagattctacttatat
ttgtcacatgctcatccttattttcatttattcatcacatgcttaaatga
attaattgttaattcaatatagtatatgctgtttttacaatgtttcattc
actcataaatatgtgtggtattaattatatataatcatgagtgtatgata
tcaaggtatttattttactaatagacttatttaaaaggttttcactaccc
ttttctggagaaattgcttaaactgatatataacatagatttcatttaca
aatgcaggaaagtggaaaacaatcttttacaattaaacatttagaggtga
actcttgttgaataacttgtataaacaaaaccaattgttttgccaactgg
cagtgaaagaggaattccctgacttgtttttatggtataagaaacagaaa
atcatattactgtgataaaatgatgatatgagttaagaacatcaaataga
gaaaaaagaaatatcgaaaataaatcatatttcctgcatttcctcaggaa
gataaagatgggtgccggactattgcagaaaatacatcataagagtgaca
gagatttttaacaaattagcatatctacttaattatttgtgataaatttg
tcaggtgacattattgtgcagtcactctttattgaacatttcttatgaga
acatattgaggaatagaaagccaatgtgcattcgagtagttatctgcaat
tggtctgaatggaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149951310_149952481
seq2: B6Ng01-289O04.g_68_1233

seq1  GAATTCAAAGGAAGTATGAGATGAAAAACAGTCAGAGGGTGGACCAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGAAGTATGAGATGAAAAACAGTCAGAGGGTGGACCAGTAG  50

seq1  GGGGATAATGACTTGGCTGTAAAACAATAAAGAATAATAACTTTTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAATGACTTGGCTGTAAAACAATAAAGAATAATAACTTTTAAAAA  100

seq1  GTTAACATTTTTCACTGAAGATTTAAGAGCTTTGTAGGATTATCTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACATTTTTCACTGAAGATTTAAGAGCTTTGTAGGATTATCTTTTCT  150

seq1  CAAACTTTTCTAGTGTTCATTTATGTCTTGCAACTCGTGGACTTGGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTTCTAGTGTTCATTTATGTCTTGCAACTCGTGGACTTGGTAAA  200

seq1  CTTTTAATATCTTTTTCTTAACATCTCCACATATATTAGTTTTTGTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATATCTTTTTCTTAACATCTCCACATATATTAGTTTTTGTGATA  250

seq1  TTATAATAGTATATTAGAATCTTACAAGTGTACATTATAGTTAAATGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATAGTATATTAGAATCTTACAAGTGTACATTATAGTTAAATGTTA  300

seq1  AGCATAATAATTATCTGTAAATTAGCCAATTACAGTTTTCAGTGTTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAATAATTATCTGTAAATTAGCCAATTACAGTTTTCAGTGTTGACA  350

seq1  ATGGAACTCTGGGCCTTTAGCATGGTAGTAAAGCATTGTACTCCTGACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACTCTGGGCCTTTAGCATGGTAGTAAAGCATTGTACTCCTGACCA  400

seq1  GTACCATCAGCCTGCTACCTATATATCTTAGGTAAAGATTCTACTTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCAGCCTGCTACCTATATATCTTAGGTAAAGATTCTACTTATAT  450

seq1  TTGTCACATGCTCATCCTTATTTTCATTTATTCATCACATGCTTAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATGCTCATCCTTATTTTCATTTATTCATCACATGCTTAAATGA  500

seq1  ATTAATTGTTAATTCAATATAGTATATGCTGTTTTTACAATGTTTCATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGTTAATTCAATATAGTATATGCTGTTTTTACAATGTTTCATTC  550

seq1  ACTCATAAATATGTGTGGTATTAATTATATATAATCATGAGTGTATGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAAATATGTGTGGTATTAATTATATATAATCATGAGTGTATGATA  600

seq1  TCAAGGTATTTATTTTACTAATAGACTTATTTAAAAGGTTTTCACTACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTATTTATTTTACTAATAGACTTATTTAAAAGGTTTTCACTACCC  650

seq1  TTTTCTGGAGAAATTGCTTAAACTGATATATAACATAGATTTCATTTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGAGAAATTGCTTAAACTGATATATAACATAGATTTCATTTACA  700

seq1  AATGCAGGAAAGTGGAAAACAATCTTTTACAATTAAACATTTAGAGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGGAAAGTGGAAAACAATCTTTTACAATTAAACATTTAGAGGTGA  750

seq1  ACTCTTGTTGAATAACTTGTATAAACAAAACCAATTGTTTTGCCAACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTTGAATAACTTGTATAAACAAAACCAATTGTTTTGCCAACTGG  800

seq1  CAGTGAAAGAGGAATTCCCTGACTTGTTTTTATGGTATAAGAAACAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAAGAGGAATTCCCTGACTTGTTTTTATGGTATAAGAAACAGAAA  850

seq1  ATCATATTACTGTGATAAAATGATGATATGAGTTAAGAACATCAAATAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTACTGTGATAAAATGATGATATGAGTTAAGAACATCAAATAGA  900

seq1  GAAAAAAGAAATATCGAAAATAAATCATATTTCCTGCAATTCCTCAGGAA  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAAAAAGAAATATCGAAAATAAATCATATTTCCTGCATTTCCTCAGGAA  950

seq1  GATAAAGATGGGTGCCGGACTATTGCAAGAAAATACATCATAAAGAGTGA  1000
      |||||||||||||||||||||||||| |||||||||||||| ||||||||
seq2  GATAAAGATGGGTGCCGGACTATTGC-AGAAAATACATCAT-AAGAGTGA  998

seq1  CAGAAGATTTTTAACAAATTAAGCATATCTACTTAATTATTTGTGAATAA  1050
      ||| |||||||||||||||| |||||||||||||||||||||||| ||||
seq2  CAG-AGATTTTTAACAAATT-AGCATATCTACTTAATTATTTGTG-ATAA  1045

seq1  ATTTGTCAGGTTGACATTATGTTGCCAGTCAACTCTTTATTGAACATTTC  1100
      |||||||||| |||||||||  || ||||| |||||||||||||||||||
seq2  ATTTGTCAGG-TGACATTATTGTG-CAGTC-ACTCTTTATTGAACATTTC  1092

seq1  -TATGAGAACATATTGA-GAATAG-AAGCAAATGTGATATCAGAGTAG-T  1146
       |||||||||||||||| |||||| |||| ||||||  ||  |||||| |
seq2  TTATGAGAACATATTGAGGAATAGAAAGCCAATGTG-CATTCGAGTAGTT  1141

seq1  ATCTGCAATTGGTTCTGATGGGAAAG  1172
      |||||||||||| |||||  ||||||
seq2  ATCTGCAATTGG-TCTGAATGGAAAG  1166