BAC Information

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BAC

Clone NameB6Ng01-290C15
Chromosome1 (Build37)
Map Location 150,574,405 - 150,575,504
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290C15.bB6Ng01-290C15.g
ACCGA087372GA087373
length1,1941,102
definitionB6Ng01-290C15.b B6Ng01-290C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgggaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
tataggtggaacaacattatggagctacagtaccccggagctctggactc
tagctgcatatatatcaaaagaatggcctagttcggcatcactggtaaag
agaggccaattggactgccaacttttatatgctcagatacaggaatacat
ggcccaaagggggattgggtgagccagggagaaaagtggtgagt

gaattctatgcacttcagttctgaggttacaggagatatagaaacaatag
ggaagacaagttttacccaatggccttttgtgacatttttgtggtgcata
cactttattgaactttattttttattaagtatcactatagaaacaaatct
ctgaggctatttatgagggtttatttataagagatggattaaggttgaaa
aaccaaatgaattaagggtggaaagccatactaaatgttgtcagcactat
tctatgttcgatggtcccaaactgagtaaaactgataaactgagataaac
agaagcatccatctctctgcttcctgacagtaggcacacgaggtgttctc
ttccttctgctccgtcatccctaggaaccatagcataactcagaataaac
cttcccttcctccagttgctttctccaggtgttttaccatggtaccaatt
caggtaactaatatagctaatagagaggctgtttatatacagcctagcca
gcagtctcccaacatcttttaatcatctatcctattcttctgtcagttta
tttttaagtttaagctctactatattttagcttatgcaatttgaatatag
ttcatatttattttttgtattctataatgtttaccaatataatttgtctc
acacaattttactatttatacaaatatgactttctctgaataaatatttc
tatttaggatactgtgtcattgcaaaaatgatgaacagactaaaattcac
taagttgaagcttctgggttgaggtacctttgtccagcattgactatata
atcattgattactaacttgtaccatcatgtaagatttaaagtatatacaa
aatatgtatattatgtataatatgtatattgaaatctctcatatatgctc
atatttatatgaacacccagtttaatagattggaatacattgatgtcaca
tacttattttaaatattacaatataatcatgaaaggagaaagaaaattga
tagaatttaagagatcaggtgaagtatttccagatttgtaacctcctttg
ggttaggtcatattgaacatttttcagaagataaagccctcaggagatgg
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150574405_150575504
seq2: B6Ng01-290C15.g_63_1164

seq1  GAATTCTATGCACTTCAGTTCTGAGGTTACAGGAGATATAGAAACAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCACTTCAGTTCTGAGGTTACAGGAGATATAGAAACAATAG  50

seq1  GGAAGACAAGTTTTACCCAATGGCCTTTTGTGACATTTTTGTGGTGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACAAGTTTTACCCAATGGCCTTTTGTGACATTTTTGTGGTGCATA  100

seq1  CACTTTATTGAACTTTATTTTTTATTAAGTATCACTATAGAAACAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATTGAACTTTATTTTTTATTAAGTATCACTATAGAAACAAATCT  150

seq1  CTGAGGCTATTTATGAGGGTTTATTTATAAGAGATGGATTAAGGTTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTATTTATGAGGGTTTATTTATAAGAGATGGATTAAGGTTGAAA  200

seq1  AACCAAATGAATTAAGGGTGGAAAGCCATACTAAATGTTGTCAGCACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATGAATTAAGGGTGGAAAGCCATACTAAATGTTGTCAGCACTAT  250

seq1  TCTATGTTCGATGGTCCCAAACTGAGTAAAACTGATAAACTGAGATAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTCGATGGTCCCAAACTGAGTAAAACTGATAAACTGAGATAAAC  300

seq1  AGAAGCATCCATCTCTCTGCTTCCTGACAGTAGGCACACGAGGTGTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATCCATCTCTCTGCTTCCTGACAGTAGGCACACGAGGTGTTCTC  350

seq1  TTCCTTCTGCTCCGTCATCCCTAGGAACCATAGCATAACTCAGAATAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTGCTCCGTCATCCCTAGGAACCATAGCATAACTCAGAATAAAC  400

seq1  CTTCCCTTCCTCCAGTTGCTTTCTCCAGGTGTTTTACCATGGTACCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCCTCCAGTTGCTTTCTCCAGGTGTTTTACCATGGTACCAATT  450

seq1  CAGGTAACTAATATAGCTAATAGAGAGGCTGTTTATATACAGCCTAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAACTAATATAGCTAATAGAGAGGCTGTTTATATACAGCCTAGCCA  500

seq1  GCAGTCTCCCAACATCTTTTAATCATCTATCCTATTCTTCTGTCAGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTCCCAACATCTTTTAATCATCTATCCTATTCTTCTGTCAGTTTA  550

seq1  TTTTTAAGTTTAAGCTCTACTATATTTTAGCTTATGCAATTTGAATATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGTTTAAGCTCTACTATATTTTAGCTTATGCAATTTGAATATAG  600

seq1  TTCATATTTATTTTTTGTATTCTATAATGTTTACCAATATAATTTGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTATTTTTTGTATTCTATAATGTTTACCAATATAATTTGTCTC  650

seq1  ACACAATTTTACTATTTATACAAATATGACTTTCTCTGAATAAATATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTTTACTATTTATACAAATATGACTTTCTCTGAATAAATATTTC  700

seq1  TATTTAGGATACTGTGTCATTGCAAAAATGATGAACAGACTAAAATTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGGATACTGTGTCATTGCAAAAATGATGAACAGACTAAAATTCAC  750

seq1  TAAGTTGAAGCTTCTGGGTTGAGGTACCTTTGTCCAGCATTGACTATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGAAGCTTCTGGGTTGAGGTACCTTTGTCCAGCATTGACTATATA  800

seq1  ATCATTGATTACTAACTTGTACCATCATGTAAGATTTAAAGTATATACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGATTACTAACTTGTACCATCATGTAAGATTTAAAGTATATACAA  850

seq1  AATATGTATATTATGTATAATATGTATATTGAAATCTCTCATATATGCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTATATTATGTATAATATGTATATTGAAATCTCTCATATATGCTC  900

seq1  ATATTTATATGAACACCCAGTTTAATAGATTGGAATACATTGATGTCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATATGAACACCCAGTTTAATAGATTGGAATACATTGATGTCACA  950

seq1  TACTTATTTTAAAATATTACAATATAATCATGAAAGGAGAAAGAAAAATT  1000
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  TACTTATTTT-AAATATTACAATATAATCATGAAAGGAGAAAG-AAAATT  998

seq1  GATAGAA-TTAAGAGAATCAGGTGAAGTATTT-CAGATTTGTAA-CTCCT  1047
      ||||||| ||||||| |||||||||||||||| ||||||||||| |||||
seq2  GATAGAATTTAAGAG-ATCAGGTGAAGTATTTCCAGATTTGTAACCTCCT  1047

seq1  TT-GGTTAAGTCATATTGAACATTTTTCAG-AGATAAAAGCCTCAGAGAA  1095
      || ||||| ||||||||||||||||||||| |||||||  ||||||   |
seq2  TTGGGTTAGGTCATATTGAACATTTTTCAGAAGATAAAGCCCTCAGGAGA  1097

seq1  TGGGC  1100
      |||||
seq2  TGGGC  1102


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