BAC Information

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BAC

Clone NameB6Ng01-290K21
Chromosome1 (Build37)
Map Location 97,934,861 - 97,935,862
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217, Slco6b1, LOC670708, LOC623430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290K21.bB6Ng01-290K21.g
ACCGA087762GA087763
length1,075922
definitionB6Ng01-290K21.b B6Ng01-290K21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccgccctgccttaaccacttgataatatgtgaaaaggaacaaa
aaggctcctaacactggagaaagttcaaggccagacataccttgtaaagc
tgttccccactttacttctgatagactgtcttgaattttgttagaaagtt
caaggccaaacctaccttgtaaagctgtaacgtgaccgtgacctgcagtt
ctggttccggaatgagggatcttccttgcgctggtgatggtaattcccgg
atttcagcaccacttattacctgcgctcgaccggccaggaaagacgcaac
aaactggaatcttctgcggcaaaagctttattgcttacatcttcaggagc
aagagagagaatggcaaaacaccgtcccttttaaggagaattatccttcg
cctaggacgtgtcgctccctgattggctgcagcccattggccgagttgtc
gtcacttcacggggaaggcagagcacatggagtggagaactacccttggt
acatgcgcagattatttgtttaccatttagaacacaggatgtcagcgcca
tcttgtaactgtgaatgtgagggtggctccccacaccccttagttacaaa
tacagaaagagaggatagtctcatgggacaacaaagatatagagatgaga
cagctctgtaaataaggttgagactaacctatactgccataaagcagcag
acactgtgtgctctcagaaactagaagacacaggaaatcatcctcccctg
gaggttctgttggaaatatacctctatccaactccaattcacacttctag
aactgcaagctgcaaggaataaatttatactgttttaatcacccacttta
aattgttgcagcaactccaaaaggttatttcgatatatttacagaatttt
taagtatttttatatcatccaaacaagctagccttacataattctttcct
aataaaacctagatataaaagtaatttactagtaatattttcatgtaaag
atgaaaaatttaaatatatgtgatagatccaagttcagcctataataaat
atatgatgtgagattttttttctgg

gaattcctcatgtcacataataatcaaaacactaaatatacagaacaaag
aaaatatttaaaatggtaaggaaaaaaggtcagataacatataatggtag
acctctgtacccaacaaaacaatcaatcaccatatatggagaaaccaaga
tattctgtgataaaaccaaacttaaatactatctttccactaatccagtc
ctacaaacgataatagaaggaaaacatcaacacaaataaggaaattacaa
ataagaaaaaacaagaaattaatcacctcacaacagatacaaaagaagag
aaccacgcaatcataataccacttctcacatgatcatcatgttacagact
gaaaaagccttcaaaaaatacaacactccttcatattaaatgttttggag
agatcaagaattcaagcatatacctaaacataataaaagcaatatagagc
aaaccataaacaggcaaatgtatggaactagaaaatatcacccggacctt
aaaggacatgcatggtttgttctcaccaataagtaggtattagcccaaaa
attgtgaatactcacaatacaattcatagaccatatgaagcttaacaaaa
aggaaggtgaaagtatggatgcttcaatcccacttagaagtgggaacaaa
ataatcactggaggtagagggaggaatggaccttggtaggggagggatca
aaaataggggaaggatcaggtatgggaagagacaggagagatgtcagagg
gcccatgagaatgaatagaaatatgtatcagtgggagatggagatctttg
ggaaccataagaagtcccagatgttggggatgtgagattctccaagactt
aaatggggatggacatttaaccaaaatagactacggcaaggagatagcac
ctcgaagactccatccttctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97934861_97935862
seq2: B6Ng01-290K21.b_129_1118

seq1  CATACCTTGTAAAGCTGTTCCCCACTTTACTTCTGATAGACTGTCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTTGTAAAGCTGTTCCCCACTTTACTTCTGATAGACTGTCTTGAA  50

seq1  TTTTGTTAGAAAGTTCAAGGCCAAACCTACCTTGTAAAGCTGTAACGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAGAAAGTTCAAGGCCAAACCTACCTTGTAAAGCTGTAACGTGA  100

seq1  CCGTGACCTGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGACCTGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCTGGT  150

seq1  GATGGTAATTCCCGGATTTCAGCACCACTTATTACCTGCGCTCGACCGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAATTCCCGGATTTCAGCACCACTTATTACCTGCGCTCGACCGGC  200

seq1  CAGGAAAGACGCAACAAACTGGAATCTTCTGCGGCAAAAGCTTTATTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGACGCAACAAACTGGAATCTTCTGCGGCAAAAGCTTTATTGCT  250

seq1  TACATCTTCAGGAGCAAGAGAGAGAATGGCAAAACACCGTCCCTTTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTCAGGAGCAAGAGAGAGAATGGCAAAACACCGTCCCTTTTAAG  300

seq1  GAGAATTATCCTTCGCCTAGGACGTGTCGCTCCCTGATTGGCTGCAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTATCCTTCGCCTAGGACGTGTCGCTCCCTGATTGGCTGCAGCCC  350

seq1  ATTGGCCGAGTTGTCGTCACTTCACGGGGAAGGCAGAGCACATGGAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCCGAGTTGTCGTCACTTCACGGGGAAGGCAGAGCACATGGAGTGG  400

seq1  AGAACTACCCTTGGTACATGCGCAGATTATTTGTTTACCATTTAGAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTACCCTTGGTACATGCGCAGATTATTTGTTTACCATTTAGAACAC  450

seq1  AGGATGTCAGCGCCATCTTGTAACTGTGAATGTGAGGGTGGCTCCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTCAGCGCCATCTTGTAACTGTGAATGTGAGGGTGGCTCCCCACA  500

seq1  CCCCTTAGTTACAAATACAGAAAGAGAGGATAGTCTCATGGGACAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTAGTTACAAATACAGAAAGAGAGGATAGTCTCATGGGACAACAAA  550

seq1  GATATAGAGATGAGACAGCTCTGTAAATAAGGTTGAGACTAACCTATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGAGATGAGACAGCTCTGTAAATAAGGTTGAGACTAACCTATACT  600

seq1  GCCATAAAGCAGCAGACACTGTGTGCTCTCAGAAACTAGAAGACACAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAAGCAGCAGACACTGTGTGCTCTCAGAAACTAGAAGACACAGGA  650

seq1  AATCATCCTCCCCTGGAGGTTCTGTTGGAAATATACCTCTATCCAACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCCTCCCCTGGAGGTTCTGTTGGAAATATACCTCTATCCAACTCC  700

seq1  AATTCACACTTCTAGAACTGCAAGCTGCAAGGAATAAATTTATACTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACACTTCTAGAACTGCAAGCTGCAAGGAATAAATTTATACTGTTT  750

seq1  TAATCACCCACTTTAAATTGTTGCAGCAACTCCAAAAGGTTATTTCGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACCCACTTTAAATTGTTGCAGCAACTCCAAAAGGTTATTTCGATA  800

seq1  TATTTACAGAATTTTTAAGTATTTTTATATCATCCAAACAAGCTAGCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACAGAATTTTTAAGTATTTTTATATCATCCAAACAAGCTAGCCTT  850

seq1  ACAATAATTCTTTCCTAAATAAAAACCTAGATATAAAAGTAAATTACTAG  900
      || |||||||||||||||   ||||||||||||||||||||| |||||||
seq2  AC-ATAATTCTTTCCTAA--TAAAACCTAGATATAAAAGTAATTTACTAG  897

seq1  TTAATAATTTTCATGTAAAAGGATGAAAAATTTAAAATATATGTGATTAG  950
       |||| |||||||||||||  |||||||||||| |||||||||||| |||
seq2  -TAAT-ATTTTCATGTAAA--GATGAAAAATTT-AAATATATGTGA-TAG  941

seq1  ATCCCAAAGTTCAAGCCTATAATAAATATTATGATGTGAGA-TTTTTTTC  999
      ||||  |||||| ||||||||||||||| |||||||||||| ||||||||
seq2  ATCC--AAGTTC-AGCCTATAATAAATA-TATGATGTGAGATTTTTTTTC  987

seq1  TGG  1002
      |||
seq2  TGG  990


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