BAC Information

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BAC

Clone NameB6Ng01-291C06
Chromosome1 (Build37)
Map Location 12,269,599 - 12,270,074
singlet/doubletsinglet
Overlap genenone
Upstream geneC030045D06Rik, A830018L16Rik, LOC665262
Downstream geneLOC100039709, LOC621353, LOC100039733, Sulf1, Slco5a1, LOC383490, Prdm14, Ncoa2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291C06.bB6Ng01-291C06.g
ACCGA088107GA088108
length4701,118
definitionB6Ng01-291C06.b B6Ng01-291C06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acttggtcgtgcagtggttcttcctcattgaaccaaaaaggacaggctga
gcttctcgcctactttgccaaaggagtttcagttggagtagagagaggga
aaatgcctgcatatcacagtgtttaatagagaacatccaatctatagaag
gacaaaaatttactgattaacacacatgctcaaatggaaatatggaacca
gggatcaaccagaaacagatttactgaaatcttttccaagttaaagttcc
aggtaaaggtcacatgcccagaggtgggcagccactcacctgtgcaagac
agagacgattccagtgacataaattttcacactggacagtttagaaaatt
atatgactaggatttttttaaatgcacatttagctccaaaactatgccaa
gccctgggtgttctatcctgattgactgatggattggaatggattggatt
ggattggattggattggatt

gaattctagagctaatctgatgggagttttagcagtgatgtatttggggt
tccatgacctgggacttgtagagacatcacctcaatgtaacaggtacatt
atttcaatctcatgcttttcaccaatgtggaggcagtactttatggtgcc
ttttgggctctggtgaaaatagtagtagtcccttttttctctaattttaa
ttttgctttctttagtttcagtaactcatggtcagccatggatcgaaaac
agttcatggaatttccagcaataaataatctatgtattgttgtttctgat
tgtaaggcttcctgctccaaacctctcagcactgagttctttctttatga
attgcacctgctatgctgcacatgctctccacacattagtctagtaacaa
tagatctggggaattgggatggccattttaaactacccagtgtggaagtt
cttgtgttcaaggaactcttgttttaattagtaatgtcccccaaatcaca
agcccccacattttcaatttgggtggatcctttaagtgaaaagatgaaag
ttcttcaagttaatgagaaaacaaaaaacgcctatggttggaatgaattg
cttctccataaaactgtaaagaagaaacactagcatgtagtttatttttg
ctgctgtttctcaagtcacagaggcttggtcccagtgcctggtaagagtt
tggtgcaaataagaaatacagaatttgtagaaaacatgatctgaaaactt
tcccatgtgacagcaggatgttgcactagaaagaatggtgttcaatttat
aattcaactatcataggtagacacgtaaaagaaaaattaggcatatgtag
ggttgtgcagtattcagagcttcagcactgtggtggtgtgaatagaatgg
cacctgtagactcaagtgtttgaatgctttgtgcatagggagtggcatta
ttaggaagtggtggcattgtttgaataggtgtggatttgttggaagaaca
tgtgttttgaagatgggctttgagtctcatatgctcaagccagtcccagt
ttgccattgttcttttctgttgctgcagaatcaaatgtagaaacttctca
gcgctcctttccctagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_12269599_12270074
seq2: B6Ng01-291C06.b_48_523

seq1  GAATTCACTTGGTCGTGCAGTGGTTCTTCCTCATTGAACCAAAAAGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGTCGTGCAGTGGTTCTTCCTCATTGAACCAAAAAGGACA  50

seq1  GGCTGAGCTTCTCGCCTACTTTGCCAAAGGAGTTTCAGTTGGAGTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGCTTCTCGCCTACTTTGCCAAAGGAGTTTCAGTTGGAGTAGAGA  100

seq1  GAGGGAAAATGCCTGCATATCACAGTGTTTAATAGAGAACATCCAATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAATGCCTGCATATCACAGTGTTTAATAGAGAACATCCAATCTA  150

seq1  TAGAAGGACAAAAATTTACTGATTAACACACATGCTCAAATGGAAATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGACAAAAATTTACTGATTAACACACATGCTCAAATGGAAATATG  200

seq1  GAACCAGGGATCAACCAGAAACAGATTTACTGAAATCTTTTCCAAGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGGGATCAACCAGAAACAGATTTACTGAAATCTTTTCCAAGTTAA  250

seq1  AGTTCCAGGTAAAGGTCACATGCCCAGAGGTGGGCAGCCACTCACCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGTAAAGGTCACATGCCCAGAGGTGGGCAGCCACTCACCTGTG  300

seq1  CAAGACAGAGACGATTCCAGTGACATAAATTTTCACACTGGACAGTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGAGACGATTCCAGTGACATAAATTTTCACACTGGACAGTTTAG  350

seq1  AAAATTATATGACTAGGATTTTTTTAAATGCACATTTAGCTCCAAAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATATGACTAGGATTTTTTTAAATGCACATTTAGCTCCAAAACTA  400

seq1  TGCCAAGCCCTGGGTGTTCTATCCTGATTGACTGATGGATTGGAATGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGCCCTGGGTGTTCTATCCTGATTGACTGATGGATTGGAATGGAT  450

seq1  TGGATTGGATTGGATTGGATTGGATT  476
      ||||||||||||||||||||||||||
seq2  TGGATTGGATTGGATTGGATTGGATT  476


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