BAC Information

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BAC

Clone NameB6Ng01-291K01
Chromosome1 (Build37)
Map Location 104,124,405 - 104,125,434
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291K01.bB6Ng01-291K01.g
ACCGA088465GA088466
length9561,035
definitionB6Ng01-291K01.b B6Ng01-291K01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatgggtttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttatagcacaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacaggataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttattctggcatggtgattccaccagaagttctttt
atccttgagaagactttttgctatcctaggttttttgttattccagacaa
atttgcaaattgctccttccaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccatccatgagcatgggagatctttccatcttct
gagatcttcccttattttattctcagagatttgaagttttatcatacaga
tcttccacttccttagttagagtcacgccaagacattatattatttgtga
ctattg

gaattcaaggtcagggcttgacaaagaaacattggagaatgttgcttcct
agttcaaaccttgtggctcatgctcagctttctttcttctatagccgaga
atcaactgctcatgattaatatcaaatacagtgggctatgtcctccttta
gacaaatttgatccaggtaattcctcagttgagatgtcctctttaattat
caatttggttttatcaaattgacaataaaaacaaaccagtacagatcata
agtggcaggttacttacacaaaggaagagtcttcacatagcatgaatact
ttctttcccataaccacatagatagagccacttttccctattgtttccca
aactttgtactatgaactgttacatagttctacctatgtaaatgcaattc
agtcattctttcatacaaatgagtgacagtagtgaatcaatactctggtg
agggtccagtgacccttcttttgcctccttcttggagagaatgtgaacag
tccatagacctaatgtgatttgctctcagaagtaagtatagctatcttat
gaatatagtggtctttccaggtttatggcaccctgttcatagaaatgaag
aaattcacaaatatcaaattcatgatggctcttgttcagaagcaaatgta
caagatacagagtatattccatccaaagaacatgagggcctatataagat
tggttcaaccttcctactgcagcctatggctttctattgtaagtacactt
cagcaggagctaaattttgggggtatggattgagagtgatttttcctttt
gggattgatagactagtttataaagcctttgtcactatgaatagcatttc
tcagggatatttatgattttattaatgtccatgtcataatttctcttcct
gtgtattaagttctctggccaaggcaacttattgggataaaatggttatt
tggattcacagttaaagggttatggtgtattattgcagaaaacttgagtt
acaactttaaaggactgttcacatttatactcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104124405_104125434
seq2: B6Ng01-291K01.g_68_1102

seq1  GAATTCAAGGTCAGGGCTTGACAAAGAAACATTGGAGAATGTTGCTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCAGGGCTTGACAAAGAAACATTGGAGAATGTTGCTTCCT  50

seq1  AGTTCAAACCTTGTGGCTCATGCTCAGCTTTCTTTCTTCTATAGCCGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAACCTTGTGGCTCATGCTCAGCTTTCTTTCTTCTATAGCCGAGA  100

seq1  ATCAACTGCTCATGATTAATATCAAATACAGTGGGCTATGTCCTCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTGCTCATGATTAATATCAAATACAGTGGGCTATGTCCTCCTTTA  150

seq1  GACAAATTTGATCCAGGTAATTCCTCAGTTGAGATGTCCTCTTTAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTTGATCCAGGTAATTCCTCAGTTGAGATGTCCTCTTTAATTAT  200

seq1  CAATTTGGTTTTATCAAATTGACAATAAAAACAAACCAGTACAGATCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGTTTTATCAAATTGACAATAAAAACAAACCAGTACAGATCATA  250

seq1  AGTGGCAGGTTACTTACACAAAGGAAGAGTCTTCACATAGCATGAATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAGGTTACTTACACAAAGGAAGAGTCTTCACATAGCATGAATACT  300

seq1  TTCTTTCCCATAACCACATAGATAGAGCCACTTTTCCCTATTGTTTCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCCATAACCACATAGATAGAGCCACTTTTCCCTATTGTTTCCCA  350

seq1  AACTTTGTACTATGAACTGTTACATAGTTCTACCTATGTAAATGCAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGTACTATGAACTGTTACATAGTTCTACCTATGTAAATGCAATTC  400

seq1  AGTCATTCTTTCATACAAATGAGTGACAGTAGTGAATCAATACTCTGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCTTTCATACAAATGAGTGACAGTAGTGAATCAATACTCTGGTG  450

seq1  AGGGTCCAGTGACCCTTCTTTTGCCTCCTTCTTGGAGAGAATGTGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCAGTGACCCTTCTTTTGCCTCCTTCTTGGAGAGAATGTGAACAG  500

seq1  TCCATAGACCTAATGTGATTTGCTCTCAGAAGTAAGTATAGCTATCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGACCTAATGTGATTTGCTCTCAGAAGTAAGTATAGCTATCTTAT  550

seq1  GAATATAGTGGTCTTTCCAGGTTTATGGCACCCTGTTCATAGAAATGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGTGGTCTTTCCAGGTTTATGGCACCCTGTTCATAGAAATGAAG  600

seq1  AAATTCACAAATATCAAATTCATGATGGCTCTTGTTCAGAAGCAAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACAAATATCAAATTCATGATGGCTCTTGTTCAGAAGCAAATGTA  650

seq1  CAAGATACAGAGTATATTCCATCCAAAGAACATGAGGGCCTATATAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATACAGAGTATATTCCATCCAAAGAACATGAGGGCCTATATAAGAT  700

seq1  TGGTTCAACCTTCCTACTGCAGCCTATGGCTTTCTATTGTAAGTACACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAACCTTCCTACTGCAGCCTATGGCTTTCTATTGTAAGTACACTT  750

seq1  CAGCAGGAGCTAAATTTTGGGGGTATGGATTGAGAGTGA-TTTTCCTTTT  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGCAGGAGCTAAATTTTGGGGGTATGGATTGAGAGTGATTTTTCCTTTT  800

seq1  -GGATTGATAGACTAGTTTATAAAGCCTTTGTCACTATGAATAGCATTTC  848
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGATAGACTAGTTTATAAAGCCTTTGTCACTATGAATAGCATTTC  850

seq1  TCA-GGATATTTATGATTTTATTAATGTCCATGTCATAATTTCTCTTCCT  897
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATATTTATGATTTTATTAATGTCCATGTCATAATTTCTCTTCCT  900

seq1  GTTGTATTAAGTTCTCTGGCCAAGGCAACTTA-TGGGATAAAATGGTTAT  946
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  G-TGTATTAAGTTCTCTGGCCAAGGCAACTTATTGGGATAAAATGGTTAT  949

seq1  TTGGATTCACAGTTAA--GGGTATGGTGTATAATTGCAGAGAACTTGAGG  994
      ||||||||||||||||  || |||||||||| |||||||| |||||||| 
seq2  TTGGATTCACAGTTAAAGGGTTATGGTGTATTATTGCAGAAAACTTGAGT  999

seq1  TACAAACTTAAAGGAACTGTTCACA-TTATACCCACA  1030
      |||||  ||||||| |||||||||| |||||| ||||
seq2  TACAACTTTAAAGG-ACTGTTCACATTTATACTCACA  1035


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