BAC Information

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BAC

Clone NameB6Ng01-291L10
Chromosome1 (Build37)
Map Location 128,679,528 - 128,799,995
singlet/doubletdoublet
Overlap geneE030049G20Rik
Upstream geneLypd1
Downstream geneLOC383559, Mgat5, LOC667090, Tmem163, Acmsd, Ccnt2, Ysk4, Rab3gap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291L10.bB6Ng01-291L10.g
ACCGA088531GA088532
length4781,178
definitionB6Ng01-291L10.b B6Ng01-291L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,679,528 - 128,680,004)(128,798,819 - 128,799,995)
sequence
ggaattcaccgcaaaagttcaaatataagaagtattttagacaaaaggat
ggaccatctagagactgccataaccggggattcatcccataatcagcctc
caaacgctgacactattgcatacactagcaagcgtttgctgaaaggaccc
tgatatagctgtctcttgtgagactatgccggggcctagcaaacacagaa
gtggatcctcacagtcagctattggatggatcacagggcccccaatggag
gagctagagaaagtacccaaggagctaaaggggtctgcaaccctataggt
ggaacaacaatatgaactaaccagtacccaccagagcttgtgtttctagc
tgcatatttatcagaagatgacctagttggcaatcagtggaaagagaagc
ccattggtcttgcaaactttatatgcctcagtacaggggaacgccagggc
caagaagtgggagtggagggggagttgg

gaattccaggacagccagggctacacagagaaaccctgtcttgaaacaac
aacaacaacaacaacaacaacaaccaacaaaaaacaaaaacaaacaaaca
aacaaacaaacaaacaacaacaaaaaagtgctcggaaccctaaatcaagc
actttggaactaagaagggtttgtacgggagatttttaacactgtgtcct
atggtctgcttgtatcatatcctcacagcacagattcatgggctgaaaga
ctgaatctcagacttcactaaggcagtatgaagagatggagcctttggaa
ggaggttaagtgatggatggaattggtacctgtattaattcttttatgtt
tcaaaattcctgatataggcagcttaagaaatgagggtttattttgtttc
acagtttgagtagagtacactatgatcgggtggcatggcagcaggaacag
gaggcagctggtcacgtagcatctacagtgaggaagcagagagagatggg
tactggtgctcagctcactcctttctattcattccaggagcccagcccgt
gggatggtgctgcccacagttacagtggaacttttctatctcattcagtc
tttatggaaacatcctcacagtcacatccagaagtgtttcaatagtgact
ctaaatcctctcaagtttatattcaagattaacagtcattactcagggaa
ccgtctaaccttctctgtctctgaagacatagtgaaaacgtgttgtctat
gaatgaccaagtggatcatctccagactccaaacctgttagaaccttgac
cttgaactcagccttcagaaccactgggaatgggtcttctgtctgcatct
ccctatctgtggtactatgctataagaaccagagtgtctgagacaagatc
cagtgcaaggacattgctgaacagcagctttgatctgagaactgaagggt
gcaggtttccaagggttccacatacatgtagcccagtgggtggagtatca
cttgtgttcaaaccttccggacttttacatgtggtcagttagctacgttg
gcaaacatctcactctggcactcccattcatctggattggcatgacctct
atcagcattggggggatttcttgatatacttgccaggctgaggcttgaac
tccagagagggacctgatgaagttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128679528_128680004
seq2: B6Ng01-291L10.b_49_525

seq1  GAATTCACCGCAAAAGTTCAAATATAAGAAGTATTTTAGACAAAAGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCGCAAAAGTTCAAATATAAGAAGTATTTTAGACAAAAGGATG  50

seq1  GACCATCTAGAGACTGCCATAACCGGGGATTCATCCCATAATCAGCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATCTAGAGACTGCCATAACCGGGGATTCATCCCATAATCAGCCTCC  100

seq1  AAACGCTGACACTATTGCATACACTAGCAAGCGTTTGCTGAAAGGACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCTGACACTATTGCATACACTAGCAAGCGTTTGCTGAAAGGACCCT  150

seq1  GATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAG  200

seq1  TGGATCCTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAGG  250

seq1  AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGCAACCCTATAGGTG  300

seq1  GAACAACAATATGAACTAACCAGTACCCACCAGAGCTTGTGTTTCTAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAATATGAACTAACCAGTACCCACCAGAGCTTGTGTTTCTAGCT  350

seq1  GCATATTTATCAGAAGATGACCTAGTTGGCAATCAGTGGAAAGAGAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTATCAGAAGATGACCTAGTTGGCAATCAGTGGAAAGAGAAGCC  400

seq1  CATTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGTCTTGCAAACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCC  450

seq1  AAGAAGTGGGAGTGGAGGGGGAGTTGG  477
      |||||||||||||||||||||||||||
seq2  AAGAAGTGGGAGTGGAGGGGGAGTTGG  477


seq1: chr1_128798819_128799995
seq2: B6Ng01-291L10.g_68_1245 (reverse)

seq1  AAGGAAACTTCATCAATGTTCCCCTTTTCTGGGAGTTC-AGGCTCAGCTT  49
      |||| ||||||||||  | ||||  | ||| ||||||| || |||||| |
seq2  AAGG-AACTTCATCA--GGTCCC--TCTCT-GGAGTTCAAGCCTCAGCCT  44

seq1  GGCAAGTATATC-AGAAAT-CCCCCAATGCTGATTAGAGGTCATGCCAAT  97
      |||||||||||| |||||| ||||||||||||| ||||||||||||||||
seq2  GGCAAGTATATCAAGAAATCCCCCCAATGCTGA-TAGAGGTCATGCCAAT  93

seq1  CCAGGATGGATGTGAGTG-CAGAGTGAGATGTTTGCC-ACGTAGCT-ACT  144
      ||| |||| ||| ||||| |||||||||||||||||| |||||||| |||
seq2  CCA-GATGAATGGGAGTGCCAGAGTGAGATGTTTGCCAACGTAGCTAACT  142

seq1  GA-CACATGTAAAAGTCC-GAAGGTTTGAACAC-AGTGATTACTC--ACC  189
      || ||||||||||||||| |||||||||||||| ||||| |||||   ||
seq2  GACCACATGTAAAAGTCCGGAAGGTTTGAACACAAGTGA-TACTCCACCC  191

seq1  ACTGGGCTACATGTATGT-GAACCCTTGGAAACCTGCACCCTTCAGTTCT  238
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTGGGCTACATGTATGTGGAACCCTTGGAAACCTGCACCCTTCAGTTCT  241

seq1  CAGAATCAAAGCTGCTGTTCAGCAATGTCCTTGCACTGGATCTTTGTCTC  288
      ||| |||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAG-ATCAAAGCTGCTGTTCAGCAATGTCCTTGCACTGGATC-TTGTCTC  289

seq1  AGACACTCTGGTTCTTATAGCATAGTACCACAGATAGGGAGATGCAGACA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTCTGGTTCTTATAGCATAGTACCACAGATAGGGAGATGCAGACA  339

seq1  GAAGACCCATTCCCAGTGGTTCTGAAGGCTGAGTTCAAGGTCAAGGTTCT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCATTCCCAGTGGTTCTGAAGGCTGAGTTCAAGGTCAAGGTTCT  389

seq1  AACAGGTTTGGAGTCTGGAGATGATCCACTTGGTCATTCATAGACAACAC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTTTGGAGTCTGGAGATGATCCACTTGGTCATTCATAGACAACAC  439

seq1  GTTTTCACTATGTCTTCAGAGACAGAGAAGGTTAGACGGTTCCCTGAGTA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCACTATGTCTTCAGAGACAGAGAAGGTTAGACGGTTCCCTGAGTA  489

seq1  ATGACTGTTAATCTTGAATATAAACTTGAGAGGATTTAGAGTCACTATTG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTTAATCTTGAATATAAACTTGAGAGGATTTAGAGTCACTATTG  539

seq1  AAACACTTCTGGATGTGACTGTGAGGATGTTTCCATAAAGACTGAATGAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTCTGGATGTGACTGTGAGGATGTTTCCATAAAGACTGAATGAG  589

seq1  ATAGAAAAGTTCCACTGTAACTGTGGGCAGCACCATCCCACGGGCTGGGC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAGTTCCACTGTAACTGTGGGCAGCACCATCCCACGGGCTGGGC  639

seq1  TCCTGGAATGAATAGAAAGGAGTGAGCTGAGCACCAGTACCCATCTCTCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAATGAATAGAAAGGAGTGAGCTGAGCACCAGTACCCATCTCTCT  689

seq1  CTGCTTCCTCACTGTAGATGCTACGTGACCAGCTGCCTCCTGTTCCTGCT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCCTCACTGTAGATGCTACGTGACCAGCTGCCTCCTGTTCCTGCT  739

seq1  GCCATGCCACCCGATCATAGTGTACTCTACTCAAACTGTGAAACAAAATA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCCACCCGATCATAGTGTACTCTACTCAAACTGTGAAACAAAATA  789

seq1  AACCCTCATTTCTTAAGCTGCCTATATCAGGAATTTTGAAACATAAAAGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCATTTCTTAAGCTGCCTATATCAGGAATTTTGAAACATAAAAGA  839

seq1  ATTAATACAGGTACCAATTCCATCCATCACTTAACCTCCTTCCAAAGGCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACAGGTACCAATTCCATCCATCACTTAACCTCCTTCCAAAGGCT  889

seq1  CCATCTCTTCATACTGCCTTAGTGAAGTCTGAGATTCAGTCTTTCAGCCC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTCATACTGCCTTAGTGAAGTCTGAGATTCAGTCTTTCAGCCC  939

seq1  ATGAATCTGTGCTGTGAGGATATGATACAAGCAGACCATAGGACACAGTG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTGTGCTGTGAGGATATGATACAAGCAGACCATAGGACACAGTG  989

seq1  TTAAAAATCTCCCGTACAAACCCTTCTTAGTTCCAAAGTGCTTGATTTAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATCTCCCGTACAAACCCTTCTTAGTTCCAAAGTGCTTGATTTAG  1039

seq1  GGTTCCGAGCACTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTGT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCGAGCACTTTTTTGTTGTTGTTTGTTTGTTTGTTTGTTTGTTTGT  1089

seq1  TTTTGTTTTTTGTTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTCAAG  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTGTTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTCAAG  1139

seq1  ACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1177
      |||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1178


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