BAC Information

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BAC

Clone NameB6Ng01-291O01
Chromosome1 (Build37)
Map Location 103,481,056 - 103,482,221
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291O01.bB6Ng01-291O01.g
ACCGA088654GA088655
length9571,160
definitionB6Ng01-291O01.b B6Ng01-291O01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgacctttccaagacttttatcatgaatgggtgtttgatttta
tcaaatgatttctcagcatctaacgagattatcatgtggtttttgtcctt
gtgtttttttatatactggattacgttgatggatttccatatattgaacc
atccctgcatttctaggatgaaacctacttggtcaggatcgatgattgtt
ttgatgtgttcttggattcagttagcaagaagtttattgaggatttttgc
atcaatattcataagggatattggtctgaagctttgtggggtctttttgt
ggtttaggtatcagagtaattgtggcttcatagaatgagttgggtagagt
accttctgtttctattttgtggaatagtttgtgaagaactgggattagat
cttctttgaaggtctgatagaactctgaactaaatccatctggtcctggg
cttttttttggttgggagactattaatgactgtttttatttctttggggg
acatagggctgtttagatcattaacctgatcttgattctaatttggtacc
tggtatctgtctagaaacttctccatttcatccaggttctccaggtttct
tgagtatagacttttgtagaaggatctgatggtgttttggatttcttcag
gatttgtttgttatgtctcccttttcattttctgattttgttaattagaa
tgtgctttcaagtgagtctggctaagggtttgtctatcttgttgattttc
ttaaagaaccagctcctagattgtttgattctctaaatagttcttcttgt
ttccacttggttgatttcgcccctgagtttcattatttcctgctgtctac
tcctcttgggtgaacttgctttcatttgttctagagctttaggtgtgttg
tcaagctgctaatgtgtgctctctctagtttttttttttggaggccctca
gatctat

gaattcatgttcttctagaaagagcaattctaaacttcatatggaaaaac
aaagaaaccaggatattgaaagcaattctcaacaataaaagaacttctga
aggattcaccatccatgatctcaagctgtactaatgatcagtagtgataa
aaactgcatggtattagcaaagagatagaaaagtcgaccagtggaaaaga
attgaagatacagatataagctcacacatatatggacaactaatctttga
caaagaagccaataatttttgggaggattcttgatatatgttatttgcaa
catagttagaagacacttcaaatttcatgggcagagctagatagttccat
ccatgtactccatctcttgtagcaagaaaacagagttcaattaccagaat
ggacagaaaagagcagaacataatggaatgcaactgctatcccagtgctg
aggagagagtgatggcgtatctctagagctcaatagccagccaatccagc
ataagagcaagtcacagctttaagccagagatcccatctcataacacaaa
tgatcaatgcccaaggaaagaaccccaaactgacctctggcttctattca
tagtcaatgttttccaaaccctggctgcactttgcccttcctaaatgtgg
tccataaagatctaaaagtggggtataaggtcaagagaccacagagaaat
ttggtctaatctcgttgcagaatagccacaatccctgactggtcttatat
tcatgtaaattaggcatgccatttcacaaaagatgaaaggagccccagtg
tgatttgcacttgaagattttctcagaatgttagaagtatttcactactg
gcatgaaaggcagatgagttttcaaactggcaaagtctcaaggatttggg
aaatttaagctgaaaatgatccagataaattgctactttccattaagagc
aagctgctggtctccctcagcagtagtttagtgatggactctgtgattaa
gtaatgatagatgtgttctggattttttacttaggatcagagaaatatgg
tacttaatattcaccagccctagggtcctctgcacttgctcagaataaaa
ataattatcagccttccattacacaagccagcatggtagaacgatcacac
cttattcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103481056_103482221
seq2: B6Ng01-291O01.g_70_1229

seq1  GAATTCATGTTCTTCTAGAAAGAGCAATTCTAAACTTCATATGGAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTTCTTCTAGAAAGAGCAATTCTAAACTTCATATGGAAAAAC  50

seq1  AAAGAAACCAGGATATTGAAAGCAATTCTCAACAATAAAAGAACTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACCAGGATATTGAAAGCAATTCTCAACAATAAAAGAACTTCTGA  100

seq1  AGGATTCACCATCCATGATCTCAAGCTGTACTAATGATCAGTAGTGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCACCATCCATGATCTCAAGCTGTACTAATGATCAGTAGTGATAA  150

seq1  AAACTGCATGGTATTAGCAAAGAGATAGAAAAGTCGACCAGTGGAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCATGGTATTAGCAAAGAGATAGAAAAGTCGACCAGTGGAAAAGA  200

seq1  ATTGAAGATACAGATATAAGCTCACACATATATGGACAACTAATCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATACAGATATAAGCTCACACATATATGGACAACTAATCTTTGA  250

seq1  CAAAGAAGCCAATAATTTTTGGGAGGATTCTTGATATATGTTATTTGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGCCAATAATTTTTGGGAGGATTCTTGATATATGTTATTTGCAA  300

seq1  CATAGTTAGAAGACACTTCAAATTTCATGGGCAGAGCTAGATAGTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTAGAAGACACTTCAAATTTCATGGGCAGAGCTAGATAGTTCCAT  350

seq1  CCATGTACTCCATCTCTTGTAGCAAGAAAACAGAGTTCAATTACCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTACTCCATCTCTTGTAGCAAGAAAACAGAGTTCAATTACCAGAAT  400

seq1  GGACAGAAAAGAGCAGAACATAATGGAATGCAACTGCTATCCCAGTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAAAAGAGCAGAACATAATGGAATGCAACTGCTATCCCAGTGCTG  450

seq1  AGGAGAGAGTGATGGCGTATCTCTAGAGCTCAATAGCCAGCCAATCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGTGATGGCGTATCTCTAGAGCTCAATAGCCAGCCAATCCAGC  500

seq1  ATAAGAGCAAGTCACAGCTTTAAGCCAGAGATCCCATCTCATAACACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGCAAGTCACAGCTTTAAGCCAGAGATCCCATCTCATAACACAAA  550

seq1  TGATCAATGCCCAAGGAAAGAACCCCAAACTGACCTCTGGCTTCTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAATGCCCAAGGAAAGAACCCCAAACTGACCTCTGGCTTCTATTCA  600

seq1  TAGTCAATGTTTTCCAAACCCTGGCTGCACTTTGCCCTTCCTAAATGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAATGTTTTCCAAACCCTGGCTGCACTTTGCCCTTCCTAAATGTGG  650

seq1  TCCATAAAGATCTAAAAGTGGGGTATAAGGTCAAGAGACCACAGAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAAAGATCTAAAAGTGGGGTATAAGGTCAAGAGACCACAGAGAAAT  700

seq1  TTGGTCTAATCTCGTTGCAGAATAGCCACAATCCCTGACTGGTCTTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTAATCTCGTTGCAGAATAGCCACAATCCCTGACTGGTCTTATAT  750

seq1  TCATGTAAATTAGGCATGCCATTTCACAAAAGATGAAAGGAGCCCCAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAAATTAGGCATGCCATTTCACAAAAGATGAAAGGAGCCCCAGTG  800

seq1  TGATTTGCACTTGAAGATTTTCTCAGAATGTTAGAAGTATTTCACTACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGCACTTGAAGATTTTCTCAGAATGTTAGAAGTATTTCACTACTG  850

seq1  GCATGAAAGGCAGATGAGTTTTCAAACTGGCAAAGTCTCAAGGATTTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAGGCAGATGAGTTTTCAAACTGGCAAAGTCTCAAGGATTTGGG  900

seq1  AAATTTAAGCTGAAAATGATCCAGATAAAATTGCTACTTTCCATTAAGAG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAATTTAAGCTGAAAATGATCCAGAT-AAATTGCTACTTTCCATTAAGAG  949

seq1  CAAGCTGCTGGTCT-CCTCAGCAGTAGGTTTAGTGATGGACTCTGTGATT  999
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  CAAGCTGCTGGTCTCCCTCAGCAGTA-GTTTAGTGATGGACTCTGTGATT  998

seq1  AAGTAATGATAGGAATGTGTTCTGGATTTTTTACTAAGGAATCAGAAGAA  1049
      ||||||||||||  ||||||||||||||||||||| ||| ||||| ||||
seq2  AAGTAATGATAG--ATGTGTTCTGGATTTTTTACTTAGG-ATCAG-AGAA  1044

seq1  ATATGGTACTTAATTATTCAACAGCCCTAGGGGTCTCTGCCACTGCTCAG  1099
      ||||||||||||| |||||| |||||||||||  ||||||   |||||||
seq2  ATATGGTACTTAA-TATTCACCAGCCCTAGGGTCCTCTGCACTTGCTCAG  1093

seq1  -ATAAAAATAAATTATCAGC--TTCAATACACCAG-CAGCACGGAAGAAC  1145
       |||||||| ||||||||||  | || ||||| || ||||| || |||||
seq2  AATAAAAAT-AATTATCAGCCTTCCATTACACAAGCCAGCATGGTAGAAC  1142

seq1  AAATCACACCTTTATTTCATT  1166
        ||||||||||   ||||||
seq2  -GATCACACCTT--ATTCATT  1160


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