BAC Information

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BAC

Clone NameB6Ng01-292C03
Chromosome1 (Build37)
Map Location 50,294,346 - 50,295,105
singlet/doubletsinglet
Overlap genenone
Upstream geneC230029F24Rik, LOC627430, LOC100041981, EG666962, EG666970
Downstream geneLOC100041993, Tmeff2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292C03.b
ACCGA088848
length1,141
definitionB6Ng01-292C03.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaaaaatactgagtggctgagaagcaccaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaagctcaacgtcctcagtcatcagggaaat
gcaaatcataacaaccctgagaatccccctcacctcaatctcaatggcta
aggtcaaaaaattaggtgaccacagatgctatcaactatgtggagaaaga
ggaacactcctcctttgctgttgagattgcaagctggtccaatctggaaa
tcaatttgtcggttcatcacaaaattggacttaatactatcctaagatcc
agcaatacccctactggacctattcccggaagatgctcgaacttgcaata
atttccctttctcccctatgttcatagcaggcttatttataataaccaga
atctggaaagaacccagatgtccctcaacaaaggaatggatacagaaatt
gtggtacatttacacaatggagtactactcatttatttaaaacaacaaat
aaatgaaattcctagaaaaatgaatggatctggaagatatcaacctaaat
gaggtaacccaatcacaaaagaacacacatgaaatgcactcacggataag
tggatattagcacagaagctcataatacccaacatacaatttgtaaaaca
catgaaacttaactgaaggaagacaaaagtgtgccttcttcaagctgtct
tagaagggtgaacaaaattcccttggaaggagttacatagagctgatttg
gagcaaagactgatgaaatggatatcctgacactgcctcacttgcagatc
catcccctaatcaatcaccactccctagacactgttgcagatgccaactt
ttagtttcttatgggattgtcgtgtgtgatactaaacaacattcttcttg
atacttcatgttgatctcaagccaatatcatgaaagaagaaatcagtatc
cttatgtgattgcaattgaagcatcaaggaatggaaaagatctgcagagc
tagaggctgaaaagaaatttgcactcttcagtaacctcgagctatgacgt
agaaagatcttgaaagcacatagccatgaattgtctattctaggtcatct
agctgactaagccactttgattataagaagccagaaatact
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50294346_50295105
seq2: B6Ng01-292C03.b_431_1187

seq1  ATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGG  50
      |||||||||| |||||| |||||||||||||||||||||||||||| |||
seq2  ATTTATAATAACCAGAATCTGGAAAGAACCCAGATGTCCCTCAACAAAGG  50

seq1  AATGGATACAGAAATTGTGGTACATTTACACAATGGAGTACTACTCAGCT  100
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  AATGGATACAGAAATTGTGGTACATTTACACAATGGAGTACTACTCATTT  100

seq1  ATTTAAAACAACAAATAAATGAAATTCCTAGAAAAATGAATGGATCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAACAACAAATAAATGAAATTCCTAGAAAAATGAATGGATCTGGA  150

seq1  AGATATCAACCTAAATGAGGTAACCCAATCACAAAAGAACACACATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCAACCTAAATGAGGTAACCCAATCACAAAAGAACACACATGAAA  200

seq1  TGCACTCACGGATAAGTGGATATTAGCACAGAAGCTCAGAATACCCAACA  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCACTCACGGATAAGTGGATATTAGCACAGAAGCTCATAATACCCAACA  250

seq1  TACAATTTGTAAAACACATGAAACTTAAGAAGAAGGAAGACAAAAGTGTG  300
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  TACAATTTGTAAAACACATGAAACTTAA-CTGAAGGAAGACAAAAGTGTG  299

seq1  CATTCTTCAAGCCTTCTTAGAAGGGTGAACAAAATTCCCATGGAAGGAGT  350
      | ||||||||||  ||||||||||||||||||||||||| ||||||||||
seq2  CCTTCTTCAAGCTGTCTTAGAAGGGTGAACAAAATTCCCTTGGAAGGAGT  349

seq1  TACAGAGAAAAAGTTTGGAGCAGAGACTGAAGAAATGGATATCCAGAGAC  400
      |||| |||     ||||||||| ||||||| ||||||||||||| || ||
seq2  TACATAGAGCTGATTTGGAGCAAAGACTGATGAAATGGATATCCTGACAC  399

seq1  TGCCACACTTGGGGATCCATCCCATAATCAATCACCAAT-CCTAGACACT  449
      |||| ||||||  |||||||||| ||||||||||||| | ||||||||||
seq2  TGCCTCACTTGCAGATCCATCCCCTAATCAATCACCACTCCCTAGACACT  449

seq1  GTTGCAGATGCCAACTTTTATTTTATTATTGGATTGTTGTGTCTGGTAAG  499
      |||||||||||||||||||| ||| |||| ||||||| |||| || ||  
seq2  GTTGCAGATGCCAACTTTTAGTTTCTTATGGGATTGTCGTGTGTGATACT  499

seq1  TAACAACATTCTTCTTGCTACTTCATGTTGATCAAGAGCCAATATCATGA  549
       |||||||||||||||| |||||||||||||||   ||||||||||||||
seq2  AAACAACATTCTTCTTGATACTTCATGTTGATCTCAAGCCAATATCATGA  549

seq1  AAGAAGAAATCACTAGTCTTATGTGATTGAAATTGAGGCCATCAAGGAAT  599
      |||||||||||| ||  |||||||||||| |||||| | |||||||||||
seq2  AAGAAGAAATCAGTATCCTTATGTGATTGCAATTGAAG-CATCAAGGAAT  598

seq1  GGAGAAAGTAGGGAGAGTAAGAGGCTTAGAAGAAATTTACAATCTTCAAT  649
      ||| ||  |  | ||||  ||||||| | ||||||||| || |||||| |
seq2  GGAAAAGATCTGCAGAGCTAGAGGCTGAAAAGAAATTTGCACTCTTCAGT  648

seq1  AAACTCCGAGCTAAGAAGGTAGAAAGATCCTTGAAGCCACAGA-CCAGTG  698
      || || ||||||| | | |||||||||| ||||||  |||| | |||   
seq2  AACCT-CGAGCTATG-ACGTAGAAAGAT-CTTGAAAGCACATAGCCATGA  695

seq1  ATTGTCTCATTC-AAGTCATCTGGCATGCCAAAGGCCATTTG-TAGAAAG  746
      ||||||| |||| | ||||||| || || | ||| |  |||| |   |||
seq2  ATTGTCT-ATTCTAGGTCATCTAGC-TGACTAAGCCACTTTGATTATAAG  743

seq1  AAGCCAGAAATACT  760
      ||||||||||||||
seq2  AAGCCAGAAATACT  757