BAC Information

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BAC

Clone NameB6Ng01-292E19
Chromosome1 (Build37)
Map Location 106,622,681 - 106,623,405
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383546, LOC100041134
Downstream geneCdh20, Rnf152, LOC100041985, Pign, LOC666249, 2310035C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292E19.bB6Ng01-292E19.g
ACCGA088975GA088976
length2471,072
definitionB6Ng01-292E19.b B6Ng01-292E19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatacatgaatcccatgtaatgatttaatcatgaaagttagtat
ttctatctcctaatgcatgttatttttttctgttaggaatcttcaaaccc
ctctttctgctttttaaaaataagtaatatggtttgtggtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgaaattcttactgttt
ttaatgcaatctgaactctagaggcttccctctcattagatgcaaaa

gaattctttgtttagctctgagccccattttttaaaatattttttattat
tacgtattttcttcaattacatttagaatgctatcccaaaagccccccat
accctcccccccacttccctacccacccattcccattttttggccctggc
attcccctgtactggggcatataaagttttcatgtccaatgggcctctct
ttccagtgatggccgactaggccatcttttgatacatatctgagccccat
tttttaatggggttatttgattttctgcagtccacattcttgagttcttt
atatatattggatattagtaccctatctgatttaggatagctaaagatcc
tttatcaatctgctggtggcctttttgtcttattgacagtgtcttttgcc
ttacagaagctttgcaattttatgaggtcccatttgtctattctcgatct
tacagcacaagccattgctgttctattcaggacatttttcccctgtgccc
atatcttcgaggcttttacccactttctcctctataaatttcactgtctc
tggttttatgtggagttccttgatccacttagatttgaccttagtacaag
gagataggaatggatcaattcgcattcttctacattttaaccaccagttg
tgccagcaccatttgttgaaaatgctgtcttttttccactggatggtttt
agatcctttgtcaaagatcaagtgaccacaggtgtgtgggttcatttctg
ggtcttcaattccattccattggtctacttgtctgtagctataccagtac
catgcagtttttatcacaattgctctgtagaacagctttagattaattaa
ttgctattttacatatgtaatacattaattaatgtcaaatactaagttgc
cttataatgtattttgaattgcttcctgtggaaaatgagaaccaagttct
attttatttatttatttttacttttatttttattaatcatccattcattt
acatctcaaatgataatttctcccgttccagtttacctctttcacaaaaa
ccccatcattcaacaatcttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106622681_106623405
seq2: B6Ng01-292E19.g_411_1137

seq1  GATCCTTTATCAATCTGCTGGTGGCCTTTTTGTCTTATTGACAGTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTTATCAATCTGCTGGTGGCCTTTTTGTCTTATTGACAGTGTCTT  50

seq1  TTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCTATTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCTATTCTC  100

seq1  GATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGACATTTTTCCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGACATTTTTCCCCTG  150

seq1  TGCCCATATCTTCGAGGCTTTTACCCACTTTCTCCTCTATAAATTTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATATCTTCGAGGCTTTTACCCACTTTCTCCTCTATAAATTTCACT  200

seq1  GTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGATTTGACCTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGATTTGACCTTAGT  250

seq1  ACAAGGAGATAGGAATGGATCAATTCGCATTCTTCTACATTTTAACCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGATAGGAATGGATCAATTCGCATTCTTCTACATTTTAACCACC  300

seq1  AGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATG  350

seq1  GTTTTAGATCCTTTGTCAAAGATCAAGTGACCACAGGTGTGTGGGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGATCCTTTGTCAAAGATCAAGTGACCACAGGTGTGTGGGTTCAT  400

seq1  TTCTGGGTCTTCAATTCCATTCCATTGGTCTACTTGTCTGTAGCTATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTCTTCAATTCCATTCCATTGGTCTACTTGTCTGTAGCTATACC  450

seq1  AGTACCATGCAGTTTTTATCACAATTGCTCTGTAGAACAGCTTTAGATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCATGCAGTTTTTATCACAATTGCTCTGTAGAACAGCTTTAGATTA  500

seq1  ATTAATTGCTATTTTACATATGTAATACATTAATTAATGTCAAATACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGCTATTTTACATATGTAATACATTAATTAATGTCAAATACTAA  550

seq1  GTTGCCTTATAATGTATTTTGAATTGCTTCCTGTGGAAAATGAGAACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTTATAATGTATTTTGAATTGCTTCCTGTGGAAAATGAGAACCAA  600

seq1  GTTCTATTTTTATTTATTTATTTTTTACTTTTTATTTTTTATTAATCATT  650
      |||||| ||||||||||||| |||||||||||   ||||||||||||| |
seq2  GTTCTA-TTTTATTTATTTA-TTTTTACTTTT--ATTTTTATTAATCA-T  645

seq1  CCATTCATTTACATCTCAAATGATA---TCTCCCGTCCCAGTT--ACTCT  695
      |||||||||||||||||||||||||   |||||||| ||||||   ||||
seq2  CCATTCATTTACATCTCAAATGATAATTTCTCCCGTTCCAGTTTACCTCT  695

seq1  TCCAC-AAAACCCCATCATCCCAC-ATCTTCC  725
      | ||| ||||||||||||| | || |||||||
seq2  TTCACAAAAACCCCATCATTCAACAATCTTCC  727


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