BAC Information

Click to search

BAC

Clone NameB6Ng01-292J21
Chromosome1 (Build37)
Map Location 78,099,478 - 78,099,824
singlet/doubletsinglet
Overlap genePax3
Upstream geneEpha4, LOC100039330
Downstream geneLOC100039210, Sgpp2, LOC100039382, Farsb, Mogat1, Acsl3, Utp14b, LOC620521, Kcne4, LOC100039260, EG545332
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292J21.bB6Ng01-292J21.g
ACCGA089210GA089211
length913907
definitionB6Ng01-292J21.b B6Ng01-292J21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaagtagagctgattcgcattcttctacatgttaacaaccagt
tgtgccagcaccatttgttgaaaatgctgtctttcttccacttgatggtt
ttagctcccttgtcaaagatcaagtgaccataggtgtgtggattcatttc
tgggtcttcagttctattagcctccaaacgatgacaccattgcataaact
agcaagcgttggctgaaaggaccctgatatagctgtctcttgtgagacta
ggccggggcctagcaaacacagaagtggatgctcacagtcagctattgga
tggagcacagggcccccaatggaggagctagagaaagtatccaaggagct
aaagagatctgcaaccctgtaggtggaacaacattatgaactaaccagta
ccccagagctcttgactctagctgcatatgtatcaaaagaaggcctagtc
ggccatcactggaaagagaggcccattggacacgcaaactttatatgccc
caatacaggggaatgccagggccaaaaaatgggaatgggtgggtagggaa
gtggtacaggctgacaatgtcatatttaataccacggtatcaaaggatcg
agactaatattttttattcctgagacaagtttgacacaactctgtgtccc
tgggcttatcccccatatgatcctggcgctgacctcattaagaacatgtg
tttctaatgctagaggttatttcattttggccaacctctgtgtttaccta
ctgacaatccggtttttccgtcccagcaattaataactgcaagatgttat
ttgacatcagttaaagcaaaataattacacaagggagccctgttgcctgt
agcaatcatctgtctttgccacaaaaaaatgatactgggaatgaaaaggc
ttaaacatgcctt
gaattctttccctgtgctctctcattagtctggctaagggtttatctatc
ttgttgattttctcaaagaaccagctccttgattggttgattctttaaat
agttcttcttgtttccacttggttgatttcacccctgagtttgattattt
ccttctgtctactcatcttgggtgaattcgcttccttttgttctagagct
tttaggtgtgttgtcaagctgctaatgtgtgctctctctagtttcttttt
gagggactcagagctatgaatttccctcttagaaatgctttcattgtgtc
ccataggtttgggtatgttgtggcttcattttcattaaactccaaaaagt
ccttaatttcgttctttattacttccttgacctaggtatcattgagaaga
gtgttgttcagtttccacgtgaatgttggctttctattatttattttgtt
attgaagatcagccttagtgcatggtgatctgataggatgcatgggacaa
tttcaatattctttttatatgttgaggcttgttttgtgaccaattatgtg
gtcaattttggagaaggtaccatgaggtgctgagaagaaggtatatcctt
ttgttttaggataaaatgttctgtagatatctgtcagatccatgtgtttc
ataacttctgttagtttcactgtgtccctgtttagtttctgtttccatga
tctgtccattggtgaaagtggtgtgttgaagtctcccactattattgtgt
gaggtgcaatgtgtgctttgagctttactaaagtttattttaagaatgtg
gctgcccttgtatttggagcatagatattcaggattgatatcctcttgga
ggattttacctttggtgagtatgaagtgccctccttgtcttttttgatga
ctttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_78099478_78099824
seq2: B6Ng01-292J21.b_599_956

seq1  TACAGGCTGACAATGTCATATTTAATACCACGGTATCAAAGGATCGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCTGACAATGTCATATTTAATACCACGGTATCAAAGGATCGAGAC  50

seq1  TAATA-TTTTTATTCCTGAGACAAGTTTGACACAACTCTGTGT-CCTGGG  98
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAATATTTTTTATTCCTGAGACAAGTTTGACACAACTCTGTGTCCCTGGG  100

seq1  CTTAT-CCCCATATGATCCTGGCGCTGACCTCATTAAGAACATGTGTTTC  147
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCCCCATATGATCCTGGCGCTGACCTCATTAAGAACATGTGTTTC  150

seq1  TAATGCTAGAGGTTATTTCATTTTGGCCAACCTCTGTGTTTTACCTACTG  197
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAATGCTAGAGGTTATTTCATTTTGGCCAACCTCTGTG-TTTACCTACTG  199

seq1  ACAATCCGG-TTTTCCGTCCCAGCAATTAATAACTGCAAGATGTTA-TTG  245
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  ACAATCCGGTTTTTCCGTCCCAGCAATTAATAACTGCAAGATGTTATTTG  249

seq1  ACATCAGTT-AAGC-AAATAATTACACAAGGGAG-CCTGT--GCTGTAGC  290
      ||||||||| |||| ||||||||||||||||||| |||||   |||||||
seq2  ACATCAGTTAAAGCAAAATAATTACACAAGGGAGCCCTGTTGCCTGTAGC  299

seq1  AATCAGCTGTCTTTGCCACAAAAAAATGATACTGGG-ATG-AAAGGCTTA  338
      ||||| |||||||||||||||||||||||||||||| ||| |||||||||
seq2  AATCATCTGTCTTTGCCACAAAAAAATGATACTGGGAATGAAAAGGCTTA  349

seq1  AACATGCCT  347
      |||||||||
seq2  AACATGCCT  358