BAC Information

Click to search

BAC

Clone NameB6Ng01-293D23
Chromosome1 (Build37)
Map Location 19,867,013 - 19,867,654
singlet/doubletsinglet
Overlap genenone
Upstream geneEG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
Downstream genePkhd1, Il17a, Il17f, Mcm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293D23.bB6Ng01-293D23.g
ACCGA089676GA089677
length789770
definitionB6Ng01-293D23.b B6Ng01-293D23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatgccaatgtttaaagccaaatattacctaaactgcacctt
gggaattccaggagaaggtcactttcatggtatgtccacaagatgctgag
caacatttccatcaaccacatactcagctcagcagtttctgcttgcatca
catgccctcgatcttgcctgggagggatgtcggggtggatcgaggcaggg
ggaagtggaagacagatatgagtcaactcatgagagatggcttgtcattc
taatttgacataaaacttaaatgtgcaaattttacattcatataatatag
tcatcttgactagaattcttttatttttaattggatattttctatattta
caacttaaatgtgatgttatctcctttcccagtcccccccccccactgcc
ccgcaaaatccctatcccatcctctctcccgggcttctatgagggtgttc
ccccacccactcactcctacctccctgacctggcattcccctacactggg
gaattgagccttcacaggaccaagggcctctcctcccattgatgcctgaa
aaggccatcttctgctacacatgcagctggagccatgagtcctccatggt
tggtggtttagtccctgggagcattggggggtggggtggggtgtctgggt
aggtgaaccctattttttagtttagaacctccatattatttccatagtgg
atgtgccggttttatagtcccatcagccatgtgtatgggctcctctctgc
ccacactttgagtaaaatcaatgtaagagtcatacctga
gaattcattgattgataattaaggaggagttagttataataaaactccac
tattgcaatttttaattggcatttcaggacattttacagttacagttact
ttgttccaggcattctctgccttttgaacggttttaataagaatgtttcc
tttccaaagccagcgctctgcaggtgacgagggaaggaaggtggaggcac
acagagcacattagtatcaggttggcagagcagcagctgaagaacctttc
ttttccttttaaatttttgtggctaccacactctacctccaggctgaact
tgttcaggggacaggtatgctctgcccgagggactttctccacaggaggc
attccataacctgaggtcctgtctgtagtagaagacactttaataactat
attgagccacagcctttccatgaatgcatgtatgtatgtatgtatgtgtg
tgtgtgtatgtatgtatgagcttttctaatagtttttaagtcacaagtca
gtagtggatgtcagacctctagtctgaacatatttatagtgctgatgtgt
ttagctacaacttttttattaaatgtaaaatttaattttgtacaactaaa
acacaaacagcttaacatgccccagacttagaaatcttaatttctctctc
tctctctctgtgtgtgtgtgtgtgagagagagagagagagagagactcag
acttttgttagaataagcagtactcagcatttaatgtgctttagcatttt
aatgcttagactgttacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_19867013_19867654
seq2: B6Ng01-293D23.b_46_687 (reverse)

seq1  ACCCCACCCCACCCCCCAATGCTCCCAGGGACTAAACCACCAACCATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCCCACCCCCCAATGCTCCCAGGGACTAAACCACCAACCATGGA  50

seq1  GGACTCATGGCTCCAGCTGCATGTGTAGCAGAAGATGGCCTTTTCAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCATGGCTCCAGCTGCATGTGTAGCAGAAGATGGCCTTTTCAGGCA  100

seq1  TCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCAATTCCCCAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCAATTCCCCAGTGT  150

seq1  AGGGGAATGCCAGGTCAGGGAGGTAGGAGTGAGTGGGTGGGGGAACACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATGCCAGGTCAGGGAGGTAGGAGTGAGTGGGTGGGGGAACACCC  200

seq1  TCATAGAAGCCCGGGAGAGAGGATGGGATAGGGATTTTGCGGGGCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAAGCCCGGGAGAGAGGATGGGATAGGGATTTTGCGGGGCAGTGG  250

seq1  GGGGGGGGGACTGGGAAAGGAGATAACATCACATTTAAGTTGTAAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGACTGGGAAAGGAGATAACATCACATTTAAGTTGTAAATATA  300

seq1  GAAAATATCCAATTAAAAATAAAAGAATTCTAGTCAAGATGACTATATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATCCAATTAAAAATAAAAGAATTCTAGTCAAGATGACTATATTA  350

seq1  TATGAATGTAAAATTTGCACATTTAAGTTTTATGTCAAATTAGAATGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGTAAAATTTGCACATTTAAGTTTTATGTCAAATTAGAATGACA  400

seq1  AGCCATCTCTCATGAGTTGACTCATATCTGTCTTCCACTTCCCCCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCTCATGAGTTGACTCATATCTGTCTTCCACTTCCCCCTGCCT  450

seq1  CGATCCACCCCGACATCCCTCCCAGGCAAGATCGAGGGCATGTGATGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCCACCCCGACATCCCTCCCAGGCAAGATCGAGGGCATGTGATGCAA  500

seq1  GCAGAAACTGCTGAGCTGAGTATGTGGTTGATGGAAATGTTGCTCAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACTGCTGAGCTGAGTATGTGGTTGATGGAAATGTTGCTCAGCAT  550

seq1  CTTGTGGACATACCATGAAAGTGACCTTCTCCTGGAATTCCCAAGGTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGACATACCATGAAAGTGACCTTCTCCTGGAATTCCCAAGGTGCA  600

seq1  GTTTAGGTAATATTTGGCTTTAAACATTGGCATGGTGAATTC  642
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGGTAATATTTGGCTTTAAACATTGGCATGGTGAATTC  642