BAC Information

Click to search

BAC

Clone NameB6Ng01-294C13
Chromosome1 (Build37)
Map Location 148,728,358 - 148,729,513
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294C13.bB6Ng01-294C13.g
ACCGA090359GA090360
length1,1651,161
definitionB6Ng01-294C13.b B6Ng01-294C13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattccctagaataagggaaaatattggtaagataaaattattc
actacatacttcttgttttttctcattcttttcttaaaacaaaaaaacta
aaaaataaaaattttagtgcaaataatgatttgtatgctttcattaaaaa
atacaacattgcttattatgtatatgaaatttctaatattcctactagtc
aattatttctatatcatattattcaaattattcacattattgttattata
tctctatttagagtatcttcccatcaatttaaatgcacatcataagcatt
gatgtggtaatatgtcaagaacaatggcattatgttgccaaggctaaaaa
ctgaaataaacaaaacaaaacccaaatccatgttgaatgtaaaacaatca
gaaaacaacagaacagatatcattttatagactttcatgcttcaatttag
gaatgctgagcatggagaatttttcagatacattcagtaacatttgagaa
cttatcctttcctactctttaaaagctcagggacatcgttttgctatgta
ttttacagttctcattaaaataaactcacgtaattatttagctaatttaa
ctaatgttcttttaatttttctatgtttttattaatcatgaattctaaga
attttgtctgctagtcttacattgtaaaattgcaaagtcaagtttctttt
ccaaattattgttttcttatttttctttatatttaggacacaaatctttt
caagttaaatcactcctgaaacatgcatccatcccttcatgcgtagaaaa
catcttttattgatcatcaaataaatgctatctccaaactctcctatgcc
tctctgaaattgataaccctttttattttattcttagattattattattg
ttattatatacacaatacatatgtagagagaaagttctatgaacgcaaaa
atatgagtttctgaatccatttttattgtttgtgcacgtatagcttcatg
ggatttcttctgaaatttctccatttaggaagatgatagctaggattggg
gtttggtcaatcaacaaagaagttcatctgaaacaattctctcccaattc
ctaacaagtctttagtccgttgtagttcttgtcttaggtcttggggagcc
tgtaaattttctcct
gaattcactaaaatccagaaaagactgggcacacatctgtaggattttta
cttaatcatttgacgtgatctagctctaatgtgtatcttttaaggtggga
agacacagttttaattcaactcttttttttctatttctttttatttactt
attttaaactcttacactagcaacttgacagcacacctaagagctctaga
aaaaaaaaggatcaaacacacccaataggagtagacagcaggaaatagtc
aaactcagggctgaaatcaaccaaatagaaataaagaaagcaagacaaag
aatcaagaaaaccaaaagttggtgctttgaatcaaaagacagataaactc
ttagccaaaatactaataggcccacaaacaatatccaaattaacaaaaat
cagaaatgaaatggagaacataacaacaaaaattaaggaaattaaaaaaa
tcatcagatcctactataaaacctttgttcaacaaaactggaaaatctag
aggtaatggatggtttttctagacagataccacataccaaagttaaatca
agagcaggtaaactatctaaaagtccatatcccacaaagaaatagaagtc
attcaaaacctcccaagcaaaagcagcccagggccagatggatttagtgc
agaattctagcagacattcaaagaagacctgataccaattttccccaaac
tatttcataaaatagaaacagaatgtacactacctaattcattttatgaa
gctataattgctttgataccttaaccacatcaggactcaacccaaaaaaa
gagaactgcagatcaatcttgcttatgaatatcgatacaaaaatactcaa
aaaattcttgcaaaaagaatccaagaatacatcaaaaccatcattcacca
ctatcaagtagcttcatccgagggatgcaaggtagttcaacatatgaaaa
tccaactcttttgatctaggccataccttctgatggaagcatataaatgg
acatggaagaagaaagtagctctctttgcctgctgctctaagacgagcaa
ctacagattctggcttggcattcatagccgttacaattacatagctaaca
tagttctgtaagtcattccataagctcctcatatatccggagagaaccta
tgttaataaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148728358_148729513
seq2: B6Ng01-294C13.b_50_1214

seq1  GAATTCTATTCCCTAGAATAAGGGAAAATATTGGTAAGATAAAATTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCCCTAGAATAAGGGAAAATATTGGTAAGATAAAATTATTC  50

seq1  ACTACATACTTCTTGTTTTTTCTCATTCTTTTCTTAAAACAAAAAAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATACTTCTTGTTTTTTCTCATTCTTTTCTTAAAACAAAAAAACTA  100

seq1  AAAAATAAAAATTTTAGTGCAAATAATGATTTGTATGCTTTCATTAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAAATTTTAGTGCAAATAATGATTTGTATGCTTTCATTAAAAA  150

seq1  ATACAACATTGCTTATTATGTATATGAAATTTCTAATATTCCTACTAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACATTGCTTATTATGTATATGAAATTTCTAATATTCCTACTAGTC  200

seq1  AATTATTTCTATATCATATTATTCAAATTATTCACATTATTGTTATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTCTATATCATATTATTCAAATTATTCACATTATTGTTATTATA  250

seq1  TCTCTATTTAGAGTATCTTCCCATCAATTTAAATGCACATCATAAGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTTAGAGTATCTTCCCATCAATTTAAATGCACATCATAAGCATT  300

seq1  GATGTGGTAATATGTCAAGAACAATGGCATTATGTTGCCAAGGCTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGTAATATGTCAAGAACAATGGCATTATGTTGCCAAGGCTAAAAA  350

seq1  CTGAAATAAACAAAACAAAACCCAAATCCATGTTGAATGTAAAACAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAAACAAAACAAAACCCAAATCCATGTTGAATGTAAAACAATCA  400

seq1  GAAAACAACAGAACAGATATCATTTTATAGACTTTCATGCTTCAATTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAACAGAACAGATATCATTTTATAGACTTTCATGCTTCAATTTAG  450

seq1  GAATGCTGAGCATGGAGAATTTTTCAGATACATTCAGTAACATTTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGAGCATGGAGAATTTTTCAGATACATTCAGTAACATTTGAGAA  500

seq1  CTTATCCTTTCCTACTCTTTAAAAGCTCAGGGACATCGTTTTGCTATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCTTTCCTACTCTTTAAAAGCTCAGGGACATCGTTTTGCTATGTA  550

seq1  TTTTACAGTTCTCATTAAAATAAACTCACGTAATTATTTAGCTAATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGTTCTCATTAAAATAAACTCACGTAATTATTTAGCTAATTTAA  600

seq1  CTAATGTTCTTTTAATTTTTCTATGTTTTTATTAATCATGAATTCTAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTCTTTTAATTTTTCTATGTTTTTATTAATCATGAATTCTAAGA  650

seq1  ATTTTGTCTGCTAGTCTTACATTGTAAAATTGCAAAGTCAAGTTTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTCTGCTAGTCTTACATTGTAAAATTGCAAAGTCAAGTTTCTTTT  700

seq1  CCAAATTATTGTTTTCTTATTTTTCTTTATATTTAGGACACAAATCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTATTGTTTTCTTATTTTTCTTTATATTTAGGACACAAATCTTTT  750

seq1  CAAGTTAAATCACTCCTGAAACATGCATCCATCCCTTCATGCGTAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAAATCACTCCTGAAACATGCATCCATCCCTTCATGCGTAGAAAA  800

seq1  CATCTTTTATTGATCATCAAATAAATGCTATCTCCAAACTCTCCTATGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTATTGATCATCAAATAAATGCTATCTCCAAACTCTCCTATGCC  850

seq1  TCTCTGAAATTGATAACCCTTTTTATTTTATTCTTAGATTATTATTATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAATTGATAACCCTTTTTATTTTATTCTTAGATTATTATTATTG  900

seq1  TTATTATATACACAATACATATGTAGAGAGAAAGTTCTATGAACGCAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATATACACAATACATATGTAGAGAGAAAGTTCTATGAACGCAAAA  950

seq1  ATATGAGTTTCTGAATCCATTTTTATTGTTTGTGCACGTATAGCTTCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGTTTCTGAATCCATTTTTATTGTTTGTGCACGTATAGCTTCATG  1000

seq1  GGATTTC-TCTGAAATTTCTCCATTTAGGAAGATGATAGCTAGGATT-GG  1048
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  GGATTTCTTCTGAAATTTCTCCATTTAGGAAGATGATAGCTAGGATTGGG  1050

seq1  GTTTGGTCAATCAACAAAAGAGTTCATCTGAGAC-ATTCT---CCCATTC  1094
      ||||||||||||||||||  ||||||||||| || |||||   || ||||
seq2  GTTTGGTCAATCAACAAAGAAGTTCATCTGAAACAATTCTCTCCCAATTC  1100

seq1  CTATC-AGTCTTTAGTCGTTTGTAGTTCTTGTC-TAGGTCTT--GGAGCC  1140
      ||| | |||||||||||  |||||||||||||| ||||||||  ||||||
seq2  CTAACAAGTCTTTAGTCCGTTGTAGTTCTTGTCTTAGGTCTTGGGGAGCC  1150

seq1  TGTTAATTTTTCTCCT  1156
      || ||| |||||||||
seq2  TG-TAAATTTTCTCCT  1165