BAC Information

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BAC

Clone NameB6Ng01-294I11
Chromosome1 (Build37)
Map Location 68,245,971 - 68,425,850
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneCps1, Kif22-ps
Downstream geneLOC667842, EG241084
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294I11.bB6Ng01-294I11.g
ACCGA090632GA090633
length2471,156
definitionB6Ng01-294I11.b B6Ng01-294I11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,425,604 - 68,425,850)(68,245,971 - 68,247,144)
sequence
ttattttttttcttccaagtaggtatagtcacctaacacattttgattat
aggaatgtatgaaagataaaatttctatttaatcattaactttcaattta
agaggcataataggaattggaaggagaaattcaatttcacataattaaat
gacccatcataaagcagatgataataagtgcataagtatctgtgaaatgt
tcagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatg

gaattcagttacataataataacgcattaaatcaaaccctgtttttcatc
ttttacagcatgaacaatatgttttcttgactgtcaattaagtttaaaag
gtaccgctaaataatagagacttttaattttaacaatatctcaaaggaat
aataactatgaaaatatggtttttctcaagaaaaatatggtgatcctact
taacttacccattactcatgtggagttagcacatgtaagtaatatatgga
aattgtaaaactataaataattataaccaagtccaatgctggcttataaa
caaaaatgaagatttttaaaagactttttctcaaatatattttaaatata
aaaaaattcaagggttgtcctatttatagatatctgtacaatgggcaagc
taactgatactattagattttatctggattaatttcttcatttgatgaaa
tcaaagacaagttacaatggttttaccatattgatatttaactaaaaggt
gaaaatgtagccatatggtggtacatagtacatcttatgtttgtctctaa
tttaatgttattataaatattgatgccataatatgaaaatactaacataa
agaatattcttactctttaatatttgacatgtgccttcatgaaacaaagt
aaataaaataatattctacttctgtggaaattataataaacttttgtttt
tacaaagctacttgatatcagcaacataatatccttgttaataatattta
attataaagaatcaaacaaataattaggatacagtattcaccacatttta
tactacaatgggaaggaatagcctgaaatcattaaaaatttcagtatcat
gtcaggcaaacatgccttaaacccagcattcagaggcaagagactggcag
atctctgagtttaagtctagcctgtactacagaacaagttcctgggatag
caaaccagcacagaaaatcctgtctttacagcaaacaaacaaataaatac
atcacgatcatgaaaatatgagaacagcctgggatgtcagctaaaatttt
acagaagtaggtcaggctgacttggcacaattcttttatggatagtttgg
ttatattaattaaattttttataccatattggatcagtcctcttcctcca
tcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68425604_68425850
seq2: B6Ng01-294I11.b_51_297 (reverse)

seq1  CATACACACACACACACACACACACACACACACACACACACAGCTGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACACACACACACACACACACACACACACACACACACAGCTGAACA  50

seq1  TTTCACAGATACTTATGCACTTATTATCATCTGCTTTATGATGGGTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGATACTTATGCACTTATTATCATCTGCTTTATGATGGGTCATT  100

seq1  TAATTATGTGAAATTGAATTTCTCCTTCCAATTCCTATTATGCCTCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGTGAAATTGAATTTCTCCTTCCAATTCCTATTATGCCTCTTAA  150

seq1  ATTGAAAGTTAATGATTAAATAGAAATTTTATCTTTCATACATTCCTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTTAATGATTAAATAGAAATTTTATCTTTCATACATTCCTATA  200

seq1  ATCAAAATGTGTTAGGTGACTATACCTACTTGGAAGAAAAAAAATAA  247
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATGTGTTAGGTGACTATACCTACTTGGAAGAAAAAAAATAA  247


seq1: chr1_68245971_68247144
seq2: B6Ng01-294I11.g_66_1221

seq1  GAATTCAGTTACATAATAATAACGCATTAAATCAAACCCTGTTTTTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTACATAATAATAACGCATTAAATCAAACCCTGTTTTTCATC  50

seq1  TTTTACAGCATGAACAATATGTTTTCTTGACTGTCAATTAAGTTTAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAGCATGAACAATATGTTTTCTTGACTGTCAATTAAGTTTAAAAG  100

seq1  GTACCGCTAAATAATAGAGACTTTTAATTTTAACAATATCTCAAAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCGCTAAATAATAGAGACTTTTAATTTTAACAATATCTCAAAGGAAT  150

seq1  AATAACTATGAAAATATGGTTTTTCTCAAGAAAAATATGGTGATCCTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTATGAAAATATGGTTTTTCTCAAGAAAAATATGGTGATCCTACT  200

seq1  TAACTTACCCATTACTCATGTGGAGTTAGCACATGTAAGTAATATATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTACCCATTACTCATGTGGAGTTAGCACATGTAAGTAATATATGGA  250

seq1  AATTGTAAAACTATAAATAATTATAACCAAGTCCAATGCTGGCTTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAAACTATAAATAATTATAACCAAGTCCAATGCTGGCTTATAAA  300

seq1  CAAAAATGAAGATTTTTAAAAGACTTTTTCTCAAATATATTTTAAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAAGATTTTTAAAAGACTTTTTCTCAAATATATTTTAAATATA  350

seq1  AAAAAATTCAAGGGTTGTCCTATTTATAGATATCTGTACAATGGGCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTCAAGGGTTGTCCTATTTATAGATATCTGTACAATGGGCAAGC  400

seq1  TAACTGATACTATTAGATTTTATCTGGATTAATTTCTTCATTTGATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGATACTATTAGATTTTATCTGGATTAATTTCTTCATTTGATGAAA  450

seq1  TCAAAGACAAGTTACAATGGTTTTACCATATTGATATTTAACTAAAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACAAGTTACAATGGTTTTACCATATTGATATTTAACTAAAAGGT  500

seq1  GAAAATGTAGCCATATGGTGGTACATAGTACATCTTATGTTTGTCTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTAGCCATATGGTGGTACATAGTACATCTTATGTTTGTCTCTAA  550

seq1  TTTAATGTTATTATAAATATTGATGCCATAATATGAAAATACTAACATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTTATTATAAATATTGATGCCATAATATGAAAATACTAACATAA  600

seq1  AGAATATTCTTACTCTTTAATATTTGACATGTGCCTTCATGAAACAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTCTTACTCTTTAATATTTGACATGTGCCTTCATGAAACAAAGT  650

seq1  AAATAAAATAATATTCTACTTCTGTGGAAATTATAATAAACTTTTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATAATATTCTACTTCTGTGGAAATTATAATAAACTTTTGTTTT  700

seq1  TACAAAGCTACTTGATATCAGCAACATAATATCCTTGTTAATAATATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCTACTTGATATCAGCAACATAATATCCTTGTTAATAATATTTA  750

seq1  ATTATAAAGAATCAAACAAATAATTAGGATACAGTATTCACCACATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAGAATCAAACAAATAATTAGGATACAGTATTCACCACATTTTA  800

seq1  TACTACAATGGGAAGGAAATAGCCTGAAATCATTAAAAATTTCAGTATCA  850
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TACTACAATGGGAAGG-AATAGCCTGAAATCATTAAAAATTTCAGTATCA  849

seq1  TGTCAGGCAAACATGCCTTAAACCCAGCATTCAAGAGGCAAGAGACTGGC  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTCAGGCAAACATGCCTTAAACCCAGCATTC-AGAGGCAAGAGACTGGC  898

seq1  AGATCTCTGAGTTTAAGTCTAGCCTGTACTACAGAACAAGTTCCT-GGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGATCTCTGAGTTTAAGTCTAGCCTGTACTACAGAACAAGTTCCTGGGAT  948

seq1  AGCAAACCAGCACAGAAAAATCCTGTCTTTAACAAGCAAACAAACAAATA  999
      ||||||||||||||| |||||||||||||||   ||||||||||||||||
seq2  AGCAAACCAGCACAG-AAAATCCTGTCTTTA--CAGCAAACAAACAAATA  995

seq1  AATACATCACGATCATGAAAAATATGAAGAACAG-CTGGGATGTTCAAGC  1048
      ||||||||||||||||| |||||||| ||||||| |||||||||   |||
seq2  AATACATCACGATCATG-AAAATATG-AGAACAGCCTGGGATGT--CAGC  1041

seq1  TAAAATTTTTACAGAAGTAGGTCAAGGCTGGAACTTTGGCAC-ATTCTTT  1097
      ||||| ||||||||||||||||| ||||||  || ||||||| |||||||
seq2  TAAAA-TTTTACAGAAGTAGGTC-AGGCTG--AC-TTGGCACAATTCTTT  1086

seq1  TTATGATAGTTTGTTTATATTAAAATAATATTTTTATATACTATATTGTG  1147
      |   ||||||||| |||||||  ||| | |||||| ||||| |||||| |
seq2  TATGGATAGTTTGGTTATATT--AATTAAATTTTT-TATACCATATTG-G  1132

seq1  ATCAGTTTCCTCTTCCTCATCTCCTCC  1174
      |||||  |||||||||||   ||||||
seq2  ATCAG--TCCTCTTCCTC-CATCCTCC  1156


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