BAC Information

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BAC

Clone NameB6Ng01-294L21
Chromosome1 (Build37)
Map Location 173,226,120 - 173,226,933
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665574, 1700015E13Rik, Nos1ap, LOC100040002, LOC640532, Olfml2b, Atf6, Dusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b, Fcgr4, Fcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4, B4galt3, Ppox, Usp21, Ufc1
Downstream geneEG622236, Dedd, Nit1, Pfdn2, 1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r, Refbp2, Itlna, Cd244, Ly9, Slamf7, Cd48, LOC100041098, Slamf1, Cd84, Slamf6, Vangl2, LOC100040199, Nhlh1, Ncstn, Copa, Pex19, LOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294L21.g
ACCGA090792
length814
definitionB6Ng01-294L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagatacatgagacctgtctcaaaaaccaaagcaacactgagaat
gaaaggaagaaactaagaacatactatcaaacaacataggggagagagga
caagaacactctattagccaagcagggtacagaacatctttaaccccagc
actccaattgcaaggggcctttggatcctgtgagttcaagggcagcctgg
tctacacagagaattctaggacatccaggagtacacagaccttgtctcaa
aagaaaaacaaataatctaccaaacaacacagggaaatcatctgggatgg
aaaaacccaacatcatttatttgtagctcagcctgtgatgacagacactc
accatcaggtctggttgatgtaataatggggatccaactccatttctgtg
cattctaggcaagaattctaacactacactacgtcctcagcccttaaaac
tatatttgagtgtttgttttttcacctagaggactggagatacagctcaa
gatttaagcgcacttgctactcttgcagaggatcagtcttcagttctcag
cacccacatggaagtcatgtctgtaactctggttccagggcatctgttgc
cctttacatgcctctactggcactgcatgcacatggtaccttacatacat
gctggtaaaacactcacatgacatacaaatatataaatttaaattgaagt
tgaaggggcacacatgccacggcataggtatgtaagtcagaggacagcat
gtcttgtttttctttctttctttccttctttctctttttttgggtagggg
gttgttttggtttt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_173226120_173226933
seq2: B6Ng01-294L21.g_69_882 (reverse)

seq1  AAAACCAAAACAACCCCCTACCCAAAAAAAGAGAAAGAAGGAAAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAACAACCCCCTACCCAAAAAAAGAGAAAGAAGGAAAGAAAGA  50

seq1  AAGAAAAACAAGACATGCTGTCCTCTGACTTACATACCTATGCCGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACAAGACATGCTGTCCTCTGACTTACATACCTATGCCGTGGCA  100

seq1  TGTGTGCCCCTTCAACTTCAATTTAAATTTATATATTTGTATGTCATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCCCCTTCAACTTCAATTTAAATTTATATATTTGTATGTCATGTG  150

seq1  AGTGTTTTACCAGCATGTATGTAAGGTACCATGTGCATGCAGTGCCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTACCAGCATGTATGTAAGGTACCATGTGCATGCAGTGCCAGTA  200

seq1  GAGGCATGTAAAGGGCAACAGATGCCCTGGAACCAGAGTTACAGACATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATGTAAAGGGCAACAGATGCCCTGGAACCAGAGTTACAGACATGA  250

seq1  CTTCCATGTGGGTGCTGAGAACTGAAGACTGATCCTCTGCAAGAGTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATGTGGGTGCTGAGAACTGAAGACTGATCCTCTGCAAGAGTAGCA  300

seq1  AGTGCGCTTAAATCTTGAGCTGTATCTCCAGTCCTCTAGGTGAAAAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGCTTAAATCTTGAGCTGTATCTCCAGTCCTCTAGGTGAAAAAACA  350

seq1  AACACTCAAATATAGTTTTAAGGGCTGAGGACGTAGTGTAGTGTTAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCAAATATAGTTTTAAGGGCTGAGGACGTAGTGTAGTGTTAGAAT  400

seq1  TCTTGCCTAGAATGCACAGAAATGGAGTTGGATCCCCATTATTACATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTAGAATGCACAGAAATGGAGTTGGATCCCCATTATTACATCAA  450

seq1  CCAGACCTGATGGTGAGTGTCTGTCATCACAGGCTGAGCTACAAATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCTGATGGTGAGTGTCTGTCATCACAGGCTGAGCTACAAATAAAT  500

seq1  GATGTTGGGTTTTTCCATCCCAGATGATTTCCCTGTGTTGTTTGGTAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGGGTTTTTCCATCCCAGATGATTTCCCTGTGTTGTTTGGTAGAT  550

seq1  TATTTGTTTTTCTTTTGAGACAAGGTCTGTGTACTCCTGGATGTCCTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTTTCTTTTGAGACAAGGTCTGTGTACTCCTGGATGTCCTAGA  600

seq1  ATTCTCTGTGTAGACCAGGCTGCCCTTGAACTCACAGGATCCAAAGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGTGTAGACCAGGCTGCCCTTGAACTCACAGGATCCAAAGGCCC  650

seq1  CTTGCAATTGGAGTGCTGGGGTTAAAGATGTTCTGTACCCTGCTTGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAATTGGAGTGCTGGGGTTAAAGATGTTCTGTACCCTGCTTGGCTA  700

seq1  ATAGAGTGTTCTTGTCCTCTCTCCCCTATGTTGTTTGATAGTATGTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTGTTCTTGTCCTCTCTCCCCTATGTTGTTTGATAGTATGTTCTT  750

seq1  AGTTTCTTCCTTTCATTCTCAGTGTTGCTTTGGTTTTTGAGACAGGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTCCTTTCATTCTCAGTGTTGCTTTGGTTTTTGAGACAGGTCTC  800

seq1  ATGTATCTGAATTC  814
      ||||||||||||||
seq2  ATGTATCTGAATTC  814