BAC Information

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BAC

Clone NameB6Ng01-295D10
Chromosome1 (Build37)
Map Location 42,269,997 - 42,475,794
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041441, LOC383634, LOC666582
Downstream gene2610017I09Rik, Pou3f3, Mrps9, Gpr45, LOC100041588, Tgfbrap1, AI597479, Fhl2, EG666642, EG666644, LOC100041644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295D10.bB6Ng01-295D10.g
ACCGA091139GA091140
length168679
definitionB6Ng01-295D10.b B6Ng01-295D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,269,997 - 42,270,164)(42,475,116 - 42,475,794)
sequence
gaattccctgttcattgctttctggtgggttcagccagtgtcagcactag
cagttgatttaatggaatagaatgggggaaaccaatataatatccaccat
gttttcacattgatactgtgggttttttttttgttgttgttattgttgtt
gttgttggttggttggtt

gaattcataagtctggttagtgctccacagaacacagcttgagagtgtct
gtaacacagtctaatctgtcaccatggccaggtaggcttcccagatgttt
gggtatttatgggcaagtgcttctcttggatgaaattagcacttaagtta
gtgggctctgggtgaagctaattgctctgcacaatgtgttgaaccttaca
cagtcaactgatcaaaactgtcatctctcaaacaagaaagaatcctgcca
gcagatggcctgcagctcttagctgggtctgtagacctgggcttttccaa
ggctctacgatgggagagaacagagccacaaagtaaatcttgatcactgt
ctgcacaatgtagttatgttcttaaaaccagagaagccaaagacgaatta
ggagggactcaaggggaagactgaaagaaaaaaatcagaggtttggctag
gaagttctttctcagtatcaaacagtacatatatgtatgcatatataagg
acaatgaaattacatttggctactgcccaatagctgtgtcctgactgcct
ctgggattgtccactctctgcagcataatgaccagaaattataaagtaag
ggatgtcagtctttttgatttctgattttaagtttgtagcaagtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_42269997_42270164
seq2: B6Ng01-295D10.b_44_211

seq1  GAATTCCCTGTTCATTGCTTTCTGGTGGGTTCAGCCAGTGTCAGCACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTTCATTGCTTTCTGGTGGGTTCAGCCAGTGTCAGCACTAG  50

seq1  CAGTTGATTTAATGGAATAGAATGGGGGAAACCAATATAATATCCACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATTTAATGGAATAGAATGGGGGAAACCAATATAATATCCACCAT  100

seq1  GTTTTCACATTGATACTGTGGGTTTTTTTTTTGTTGTTGTTATTGTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCACATTGATACTGTGGGTTTTTTTTTTGTTGTTGTTATTGTTGTT  150

seq1  GTTGTTGGTTGGTTGGTT  168
      ||||||||||||||||||
seq2  GTTGTTGGTTGGTTGGTT  168


seq1: chr1_42475116_42475794
seq2: B6Ng01-295D10.g_69_747 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACTTGCTACAAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACTTGCTACAAACTT  50

seq1  AAAATCAGAAATCAAAAAGACTGACATCCCTTACTTTATAATTTCTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGAAATCAAAAAGACTGACATCCCTTACTTTATAATTTCTGGTC  100

seq1  ATTATGCTGCAGAGAGTGGACAATCCCAGAGGCAGTCAGGACACAGCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCTGCAGAGAGTGGACAATCCCAGAGGCAGTCAGGACACAGCTAT  150

seq1  TGGGCAGTAGCCAAATGTAATTTCATTGTCCTTATATATGCATACATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGTAGCCAAATGTAATTTCATTGTCCTTATATATGCATACATATA  200

seq1  TGTACTGTTTGATACTGAGAAAGAACTTCCTAGCCAAACCTCTGATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTTTGATACTGAGAAAGAACTTCCTAGCCAAACCTCTGATTTTT  250

seq1  TTCTTTCAGTCTTCCCCTTGAGTCCCTCCTAATTCGTCTTTGGCTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCAGTCTTCCCCTTGAGTCCCTCCTAATTCGTCTTTGGCTTCTCT  300

seq1  GGTTTTAAGAACATAACTACATTGTGCAGACAGTGATCAAGATTTACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAAGAACATAACTACATTGTGCAGACAGTGATCAAGATTTACTTT  350

seq1  GTGGCTCTGTTCTCTCCCATCGTAGAGCCTTGGAAAAGCCCAGGTCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTGTTCTCTCCCATCGTAGAGCCTTGGAAAAGCCCAGGTCTACA  400

seq1  GACCCAGCTAAGAGCTGCAGGCCATCTGCTGGCAGGATTCTTTCTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGCTAAGAGCTGCAGGCCATCTGCTGGCAGGATTCTTTCTTGTTT  450

seq1  GAGAGATGACAGTTTTGATCAGTTGACTGTGTAAGGTTCAACACATTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGACAGTTTTGATCAGTTGACTGTGTAAGGTTCAACACATTGTG  500

seq1  CAGAGCAATTAGCTTCACCCAGAGCCCACTAACTTAAGTGCTAATTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATTAGCTTCACCCAGAGCCCACTAACTTAAGTGCTAATTTCAT  550

seq1  CCAAGAGAAGCACTTGCCCATAAATACCCAAACATCTGGGAAGCCTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGAAGCACTTGCCCATAAATACCCAAACATCTGGGAAGCCTACCT  600

seq1  GGCCATGGTGACAGATTAGACTGTGTTACAGACACTCTCAAGCTGTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGTGACAGATTAGACTGTGTTACAGACACTCTCAAGCTGTGTTC  650

seq1  TGTGGAGCACTAACCAGACTTATGAATTC  679
      |||||||||||||||||||||||||||||
seq2  TGTGGAGCACTAACCAGACTTATGAATTC  679


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