BAC Information

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BAC

Clone NameB6Ng01-296P23
Chromosome1 (Build37)
Map Location 151,515,861 - 151,517,062
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296P23.bB6Ng01-296P23.g
ACCGA092467GA092468
length1,1921,152
definitionB6Ng01-296P23.b B6Ng01-296P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagatagagaaatggttaaagcttacttcagaaaactctgtatg
tcacagtacagttaataaagaacactctgtatgtcaaagaatactttata
aagaatagaaatgtgtcacctcacacctctagaggacaggaagactaaga
gtcagaatctggaaaacactgtcacacaaaattaagtgtaaacacatttt
tgaaggaagcaagtattcaaattatatgattctatgacagtaagtattta
atttctggccttaatgaccagggccaaaaatgcatgttgattgcaattac
tccaagtaaattctaaacaacagaaagaaagaacagtcctagatcctgct
actcttctgcaaaccctttgacttattttgaaactatgtgtgattcatct
atattaaaagtaattctttaagtattaatgacatgaaattctgatttgat
ggtatacgaggaaatatattttatagtttaaaaaataatattaaatacca
ctttttaataagaagacctttctgataatttaacagagtcctggctctac
atcacagtaattttataataatataatgtaaaaacatatttctcattttc
aggagaaatgacaataaataaataaaccaaaattgtggtgaataacaata
atatacaagaaatacaagcagctttatcatttaatacagtgaggtacaga
aaactgtagccttgctgaattaaaaaagaaacacatgagaaaaattaaaa
ttataaaatggaaaccagatggaaatactaaacctgaaaactgaaaaggt
gagtccctaaattcaaaacagatcaatagtacaatctaatattcagaata
tgtcttagacttttcaagtcagtatttgatacataacaaatttattaggc
ttcaattctttttgagaagaattgaaatgaggttcagttgttctttctct
ccttgcaatgtgacccttaattcattgttgggaataaagatataaaagtg
tgtcaaacacagcaaaactacttttcttatactcatggtatgcatcttcc
aacccacattttacactattatctactcactagatgctcagaacacaagt
tgtacactgaatgattgagtgcatgtttctcgcatgttctgtttgatgtg
atgtccagcattatctagcttgacattgccaggtaatatatt

gaattctttgtttagctctgagcaccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcaatttca
tgaggtcccatttgttgattctcaatcttacagaacaagccatttcaaga
actcctaaacctgataaacagcttcagtgaagtagctggatataaaatta
actcaaacaagtcaatggcctttctgtacacaaaggataaacaggctgag
aaagaaattagggaaacaacacccttctcaatagtcacaaataatataaa
ataccttggcgtgactctaactaaggaagtgaaagatctgtatgataaga
acttcaagtctctgaagaaagaaattaaagaaatctttctcagaagatgg
aaagatctccaaggctcatggattggcaggatcaatatagtaaaaatggc
tatcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattc
caactcaattcttcaatgaattagaaagggcaatctgcaaattcatctgg
aataacaaaagtcctaggatagcaaaaactcttctcaaggataaaagaac
ctctggtggaatcaccctgcctgacctaaagctgtactacagagcaattg
tgataaaaactgcatggtactggtatagagacagacaagtagaccaatgg
aatagaattgaagacccagaaatgaacccacacacttgatctttgacaag
ggagctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtg
ctggcacaactgggttgttaacatgtagaagaatgcccaattgatccatt
ccctatctccttgtagtaagacaaatctaaggtggatgtaggaaatcaca
taaaatcagagacagtgaaacttatagaggagaagtggggaaaagctcta
agaatatgacacaaggaaaaaactctgatgtcattcctattccaaccaca
caagctattctaaccagtgattccatataggaattcaattcgtaactctg
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151515861_151517062
seq2: B6Ng01-296P23.b_48_1239

seq1  GAATTCCAGATAGAGAAATGGTTAAAGCTTACTTCAGAAAACTCTGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATAGAGAAATGGTTAAAGCTTACTTCAGAAAACTCTGTATG  50

seq1  TCACAGTACAGTTAATAAAGAACACTCTGTATGTCAAAGAATACTTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTACAGTTAATAAAGAACACTCTGTATGTCAAAGAATACTTTATA  100

seq1  AAGAATAGAAATGTGTCACCTCACACCTCTAGAGGACAGGAAGACTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGAAATGTGTCACCTCACACCTCTAGAGGACAGGAAGACTAAGA  150

seq1  GTCAGAATCTGGAAAACACTGTCACACAAAATTAAGTGTAAACACATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATCTGGAAAACACTGTCACACAAAATTAAGTGTAAACACATTTT  200

seq1  TGAAGGAAGCAAGTATTCAAATTATATGATTCTATGACAGTAAGTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAAGCAAGTATTCAAATTATATGATTCTATGACAGTAAGTATTTA  250

seq1  ATTTCTGGCCTTAATGACCAGGGCCAAAAATGCATGTTGATTGCAATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGCCTTAATGACCAGGGCCAAAAATGCATGTTGATTGCAATTAC  300

seq1  TCCAAGTAAATTCTAAACAACAGAAAGAAAGAACAGTCCTAGATCCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTAAATTCTAAACAACAGAAAGAAAGAACAGTCCTAGATCCTGCT  350

seq1  ACTCTTCTGCAAACCCTTTGACTTATTTTGAAACTATGTGTGATTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGCAAACCCTTTGACTTATTTTGAAACTATGTGTGATTCATCT  400

seq1  ATATTAAAAGTAATTCTTTAAGTATTAATGACATGAAATTCTGATTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAGTAATTCTTTAAGTATTAATGACATGAAATTCTGATTTGAT  450

seq1  GGTATACGAGGAAATATATTTTATAGTTTAAAAAATAATATTAAATACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACGAGGAAATATATTTTATAGTTTAAAAAATAATATTAAATACCA  500

seq1  CTTTTTAATAAGAAGACCTTTCTGATAATTTAACAGAGTCCTGGCTCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATAAGAAGACCTTTCTGATAATTTAACAGAGTCCTGGCTCTAC  550

seq1  ATCACAGTAATTTTATAATAATATAATGTAAAAACATATTTCTCATTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGTAATTTTATAATAATATAATGTAAAAACATATTTCTCATTTTC  600

seq1  AGGAGAAATGACAATAAATAAATAAACCAAAATTGTGGTGAATAACAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAATGACAATAAATAAATAAACCAAAATTGTGGTGAATAACAATA  650

seq1  ATATACAAGAAATACAAGCAGCTTTATCATTTAATACAGTGAGGTACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAGAAATACAAGCAGCTTTATCATTTAATACAGTGAGGTACAGA  700

seq1  AAACTGTAGCCTTGCTGAATTAAAAAAGAAACACATGAGAAAAATTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAGCCTTGCTGAATTAAAAAAGAAACACATGAGAAAAATTAAAA  750

seq1  TTATAAAATGGAAACCAGATGGAAATACTAAACCTGAAAACTGAAAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAATGGAAACCAGATGGAAATACTAAACCTGAAAACTGAAAAGGT  800

seq1  GAGTCCCTAAATTCAAAACAGATCAATAGTACAATCTAATATTCAGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCTAAATTCAAAACAGATCAATAGTACAATCTAATATTCAGAATA  850

seq1  TGTCTTAGACTTTTCAAGTCAGTATTTGATACATAACAAATTTATTAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTAGACTTTTCAAGTCAGTATTTGATACATAACAAATTTATTAGGC  900

seq1  TTCAATTCTTTTTGAGAAAGAATTGAAATGAGGTTCAGTTGTTCTTTCTC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTCAATTCTTTTTGAG-AAGAATTGAAATGAGGTTCAGTTGTTCTTTCTC  949

seq1  TCCTTGCAATGTGACCCTTAATTCATTGTT-GGAATAAAGATATAAAAGT  999
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCTTGCAATGTGACCCTTAATTCATTGTTGGGAATAAAGATATAAAAGT  999

seq1  GTGTCAAACAACAGCAAAACTACCTTTCTTATACTCAATGGTATGCAATC  1049
      ||||||||| ||||||||||||| |||||||||||| ||||||||| |||
seq2  GTGTCAAAC-ACAGCAAAACTACTTTTCTTATACTC-ATGGTATGC-ATC  1046

seq1  TTCCAAACCCACATTTTAACAACCTATTATCTACTCACTAGATGCCTCAG  1099
      |||| |||||||||||| |||  ||||||||||||||||||||| |||||
seq2  TTCC-AACCCACATTTT-ACA--CTATTATCTACTCACTAGATG-CTCAG  1091

seq1  -ACACAAGTTGTACACTG-ATGATGGAGGTGAATGTTTCTCGCATGTCCT  1147
       ||||||||||||||||| ||||| || ||| ||||||||||||||| ||
seq2  AACACAAGTTGTACACTGAATGATTGA-GTGCATGTTTCTCGCATGTTCT  1140

seq1  GTTTTGGTGGTGGTATGTTCAGCATTAATCTAGGTTTGACATTGCCAG--  1195
      |||    || ||  |||| ||||||| ||||| | |||||||||||||  
seq2  GTT----TGATGTGATGTCCAGCATT-ATCTA-GCTTGACATTGCCAGGT  1184

seq1  -TTATATT  1202
        ||||||
seq2  AATATATT  1192


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