BAC Information

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BAC

Clone NameB6Ng01-297E10
Chromosome1 (Build37)
Map Location 103,959,864 - 103,961,011
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297E10.bB6Ng01-297E10.g
ACCGA092672GA092673
length1,1441,203
definitionB6Ng01-297E10.b B6Ng01-297E10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaccttttgcttacttaattggtatagaatggtctcaaaagcc
agtctttatctccaaaatatcttaatatggaaaatactcagtatcctgta
ttcaagcctcaaagcatgctgatgccaacctgacatttctagtaaacaaa
agctacctgccagctggtggataagatgcttgcttcctgaggctctccag
ccatgatgacttgtcacaaataatgtgatccagctattgttgtgcttcct
aggcaggaggcagcacatcagcaacctggctgcagcctaagaccagtgtg
aatgtcaggttacttaacttctttacccaaccattactgacaatgttcac
atgtctgagattcagttttccttattgtggagtcagaggagggttgggat
taagatcagtcataattttacagttctgtgattccaaattgtaaattatc
atattggaatggcacaaaaatgcttcatcccaataacattttacaggtat
aatgtcaatagcacatcgggatacattgtagtcaacttttactttataca
aaatttgtatttaggatactcagccttacaatgagattcttacatctgtg
gtgatatttgcatatatgatgtggtagagaggaacaagaaccatgtagaa
aaacaaagacattatgtgtagaaatcaaaccactggtctggcaagattac
aagggtgctagctgctaaacctgaataccttagtttgattcctgggatcc
agataatagaaggagagagccaagtttcaaatgacatcctgtggctttca
catgcatgtggtggtaggtatgcatgtatgtgcatatgcactaaataaat
aaatagtttttaagaaatataggtagactattatttatagctccactaat
cttaggtttatgatttttacagtgcagtggtagctaaataattcctagcc
tagcctcctttttacagaagaaacaactatcatttttctctttgaacatt
tcagaataaaactcttgcttaaaagtcactctgtttttcctagagtgatt
tttacatttcagctcatttcacctctatggatagtagcaagaatgtatta
gtaggaaagaatgcctgtttcttaaattggagtgcaatgccatc

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcatgatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactactcgtttggttaattctttga
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagg
gcttttagatgtgttgtcagctgctactatgtgcctgtctcccgttttct
tcttggaagcacctcagcgctattgagtttccctcttagaatgctttcat
tgtgttcccataggtttgggtacgttgtgccttcatttccattaacctcc
taaaaagtcctttaatttcctttccttattcctccttggaccaggtatcc
atgagaagagtgttatccagttccacgtgcaatgttgccttcatacttag
tttgctaatgagatcagacctaggccatgtcgttgctgatagagaatcta
ctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103959864_103961011
seq2: B6Ng01-297E10.b_50_1193 (reverse)

seq1  GATGCCATTGGCACTCAAATTTAAAGAAACA-GCA-TCTTTCCTACTTAA  48
      |||| |||| |||||| ||||| |||||||| ||| |||||||||| |||
seq2  GATGGCATT-GCACTCCAATTT-AAGAAACAGGCATTCTTTCCTAC-TAA  47

seq1  TACCATCTTGCTACTATCCATAGA-GTGAAATGAAGCTTGAAATGTAAAA  97
      |||  ||||||||||||||||||| |||||||| ||| ||||||||||||
seq2  TACATTCTTGCTACTATCCATAGAGGTGAAATG-AGC-TGAAATGTAAAA  95

seq1  ATCACCTCTAGGAAAAACAGAGTGACTTTTTAAGCAAGAGTTTTA-TCTG  146
      |||| ||||||||||||||||||||| |||||||||||||||||| ||||
seq2  ATCA-CTCTAGGAAAAACAGAGTGAC-TTTTAAGCAAGAGTTTTATTCTG  143

seq1  AAATGTTCAAAAGAGAAAAATGATAGTTGTTTCTTCTGTAAAAAGGAGGC  196
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTC-AAAGAGAAAAATGATAGTTGTTTCTTCTGTAAAAAGGAGGC  192

seq1  TAGGCTAGGAATTATTTAGCTACCACTGCACTGTAAAAATCATAAACCTA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAGGAATTATTTAGCTACCACTGCACTGTAAAAATCATAAACCTA  242

seq1  AGATTAGTGGAGCTATAAATAATAGTCTACCTATATTTCTTAAAAACTAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGTGGAGCTATAAATAATAGTCTACCTATATTTCTTAAAAACTAT  292

seq1  TTATTTATTTAGTGCATATGCACATACATGCATACCTACCACCACATGCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTAGTGCATATGCACATACATGCATACCTACCACCACATGCA  342

seq1  TGTGAAAGCCACAGGATGTCATTTGAAACTTGGCTCTCTCCTTCTATTAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGCCACAGGATGTCATTTGAAACTTGGCTCTCTCCTTCTATTAT  392

seq1  CTGGATCCCAGGAATCAAACTAAGGTATTCAGGTTTAGCAGCTAGCACCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCCAGGAATCAAACTAAGGTATTCAGGTTTAGCAGCTAGCACCC  442

seq1  TTGTAATCTTGCCAGACCAGTGGTTTGATTTCTACACATAATGTCTTTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATCTTGCCAGACCAGTGGTTTGATTTCTACACATAATGTCTTTGT  492

seq1  TTTTCTACATGGTTCTTGTTCCTCTCTACCACATCATATATGCAAATATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACATGGTTCTTGTTCCTCTCTACCACATCATATATGCAAATATC  542

seq1  ACCACAGATGTAAGAATCTCATTGTAAGGCTGAGTATCCTAAATACAAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGATGTAAGAATCTCATTGTAAGGCTGAGTATCCTAAATACAAAT  592

seq1  TTTGTATAAAGTAAAAGTTGACTACAATGTATCCCGATGTGCTATTGACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAAAGTAAAAGTTGACTACAATGTATCCCGATGTGCTATTGACA  642

seq1  TTATACCTGTAAAATGTTATTGGGATGAAGCATTTTTGTGCCATTCCAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCTGTAAAATGTTATTGGGATGAAGCATTTTTGTGCCATTCCAAT  692

seq1  ATGATAATTTACAATTTGGAATCACAGAACTGTAAAATTATGACTGATCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATTTACAATTTGGAATCACAGAACTGTAAAATTATGACTGATCT  742

seq1  TAATCCCAACCCTCCTCTGACTCCACAATAAGGAAAACTGAATCTCAGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAACCCTCCTCTGACTCCACAATAAGGAAAACTGAATCTCAGAC  792

seq1  ATGTGAACATTGTCAGTAATGGTTGGGTAAAGAAGTTAAGTAACCTGACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACATTGTCAGTAATGGTTGGGTAAAGAAGTTAAGTAACCTGACA  842

seq1  TTCACACTGGTCTTAGGCTGCAGCCAGGTTGCTGATGTGCTGCCTCCTGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACTGGTCTTAGGCTGCAGCCAGGTTGCTGATGTGCTGCCTCCTGC  892

seq1  CTAGGAAGCACAACAATAGCTGGATCACATTATTTGTGACAAGTCATCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAGCACAACAATAGCTGGATCACATTATTTGTGACAAGTCATCAT  942

seq1  GGCTGGAGAGCCTCAGGAAGCAAGCATCTTATCCACCAGCTGGCAGGTAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGAGCCTCAGGAAGCAAGCATCTTATCCACCAGCTGGCAGGTAG  992

seq1  CTTTTGTTTACTAGAAATGTCAGGTTGGCATCAGCATGCTTTGAGGCTTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTACTAGAAATGTCAGGTTGGCATCAGCATGCTTTGAGGCTTG  1042

seq1  AATACAGGATACTGAGTATTTTCCATATTAAGATATTTTGGAGATAAAGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGGATACTGAGTATTTTCCATATTAAGATATTTTGGAGATAAAGA  1092

seq1  CTGGCTTTTGAGACCATTCTATACCAATTAAGTAAGCAAAAGGTAAGAAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTTGAGACCATTCTATACCAATTAAGTAAGCAAAAGGTAAGAAT  1142

seq1  TC  1148
      ||
seq2  TC  1144


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