BAC Information

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BAC

Clone NameB6Ng01-297N12
Chromosome1 (Build37)
Map Location 79,871,975 - 79,980,781
singlet/doubletdoublet
Overlap geneEG433326, LOC665064
Upstream geneEG545332, Scg2, Ap1s3, Wdfy1, Mrpl44, Serpine2
Downstream geneLOC100039325, A830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10, LOC665092
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297N12.bB6Ng01-297N12.g
ACCGA093104GA093105
length1,044846
definitionB6Ng01-297N12.b B6Ng01-297N12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,979,738 - 79,980,781)(79,871,975 - 79,872,820)
sequence
gaattcttgtctttttccctttgtgacatacacataaacagactcgtgca
ggtgtatcctgaacagtgtttgagattcagggtcttcgcagcacacatat
tgaagaatgactgaggcattgcgatgggaagacagcacttctctgccttg
cctttgcgctctggaaaattgagtccatgttagttgtctctctgctcagc
cttttcagtaaacagttcacttccagccttcattagatgggctgcagaaa
gggggatcagagagctcaacagaggcctgaagatggctgatggatatcac
ttgtggatgcaaaggagaccttcaccaggtaagtagattatggccagaat
ggtaggtagaaggctgagggaggggcttgcttcagagtcagatgactgga
agcttgtgagaaggccagagaatgtgcattcagaggcagttgatggacag
agccaaagtaaaataaaatgtaagaagactcagatgttcaggctggagaa
acaataaagagacacaaacaagtgcacagtttggatcattgagtttggaa
caaaaggagccaagcaggcaggtctttaaagaagggaccacatggtttat
atagaatcgaatcacagcacaaaccattgcagtgagaagataaccaaaga
taactgattgaaaggtctcctgcgattcgagggaacatgaaaccagagct
cagggtagaaccatccaatggatagctcgctatagggaagaagctgcaaa
ggaaaactgttgtgtccggccagcagatcacaggtctgggttctagcctg
gaaaggcattttggaaacctggaagagaagaggggctgggctgcgcgaga
taaggaaggaaccaagacaaaggtctctgctcaaggttcaatttttacta
ttccagcactccgttaagaaggaaggggggagggggcccgattcccgcca
aataatcttggagtccagtagcaggtgaccatcgtgtacgctctgaacag
caaagcctgcaggttccagcagtgggcgtgcagacgattagcgg

gaattccgagaaaactcagcctttgacatttgtgtgaaagcacatgtcca
ggcgtgtatctttatggagaagggactgtgaatgaccgctgcatggttct
tcctgctgttatcatggccactctcaatacatagcaaatggaatcttgac
ttgccagggcagacagcctggtgattatttcattcaaaaaagcttgttaa
aagttctggaaacagatctgatgaaggaaggtgtttaattgttcccctcg
atttatagtgagctccagaacaggtttaacatctgcaagcatatgaaaac
tatagaagggatcgtgacatgttctccatcactactgataatacatgatt
aaattcaataaattctaggagtaagcaggcagttcagatggctcagtggt
taagaaactatgtactgctattgaagaggacctgagctcaggtcccacac
tcgcgctgggtggcacacaaccacttgtaactcttgtaactccagaagca
tccaatgtctgtagcctcgcaaaggcttcttgcactcatatcacacacac
aattaaaagtaaaagtaagtatgtattaaaaaaaaatcagtttagcttcc
agccagaaatgagtatagaggtcacccactagaggaaaaccagcttctag
aatacaaaagcttaggcctggtgtggtgccacatacctttaatactagca
ctcaagatctaagggctaggcagatctgagtttaaggccagcctggtcta
tagagacagtaccaggatagggacagactgggctatgcagagaaaccctg
tctcagtgaggggaagagggagaataagagggaagaagggagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_79979738_79980781
seq2: B6Ng01-297N12.b_49_1092 (reverse)

seq1  CCGCTAATCGTTCTGCCACGCCCACTGCTGGAACCTGCA-GCTTTGCTGT  49
      |||||||||| |||| ||||||||||||||||||||||| ||||||||||
seq2  CCGCTAATCG-TCTG-CACGCCCACTGCTGGAACCTGCAGGCTTTGCTGT  48

seq1  TCAGAGCCGTACACG-TGGTCACCCTGCTACTGGACTCCAAGATTATTTG  98
      |||||| |||||||| |||||| |||||||||||||||||||||||||||
seq2  TCAGAG-CGTACACGATGGTCA-CCTGCTACTGGACTCCAAGATTATTTG  96

seq1  GCGGGAATCGGGCCCC--TCCCCCTTCCTTCTTAACGGAGTGCTGGAATA  146
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  GCGGGAATCGGGCCCCCTCCCCCCTTCCTTCTTAACGGAGTGCTGGAATA  146

seq1  GTAAAAATTGAACCTTGAGCAGAGACCTTTGTCTTGGTTCCTTCCTTATC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATTGAACCTTGAGCAGAGACCTTTGTCTTGGTTCCTTCCTTATC  196

seq1  TCGCGCAGCCCAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCGCAGCCCAGCCCCTCTTCTCTTCCAGGTTTCCAAAATGCCTTTCCA  246

seq1  GGCTAGAACCCAGACCTGTGATCTGCTGGCCGGACACAACAGTTTTCCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAACCCAGACCTGTGATCTGCTGGCCGGACACAACAGTTTTCCTT  296

seq1  TGCAGCTTCTTCCCTATAGCGAGCTATCCATTGGATGGTTCTACCCTGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTTCTTCCCTATAGCGAGCTATCCATTGGATGGTTCTACCCTGAG  346

seq1  CTCTGGTTTCATGTTCCCTCGAATCGCAGGAGACCTTTCAATCAGTTATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTTTCATGTTCCCTCGAATCGCAGGAGACCTTTCAATCAGTTATC  396

seq1  TTTGGTTATCTTCTCACTGCAATGGTTTGTGCTGTGATTCGATTCTATAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTATCTTCTCACTGCAATGGTTTGTGCTGTGATTCGATTCTATAT  446

seq1  AAACCATGTGGTCCCTTCTTTAAAGACCTGCCTGCTTGGCTCCTTTTGTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGTGGTCCCTTCTTTAAAGACCTGCCTGCTTGGCTCCTTTTGTT  496

seq1  CCAAACTCAATGATCCAAACTGTGCACTTGTTTGTGTCTCTTTATTGTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTCAATGATCCAAACTGTGCACTTGTTTGTGTCTCTTTATTGTTT  546

seq1  CTCCAGCCTGAACATCTGAGTCTTCTTACATTTTATTTTACTTTGGCTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTGAACATCTGAGTCTTCTTACATTTTATTTTACTTTGGCTCT  596

seq1  GTCCATCAACTGCCTCTGAATGCACATTCTCTGGCCTTCTCACAAGCTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCAACTGCCTCTGAATGCACATTCTCTGGCCTTCTCACAAGCTTC  646

seq1  CAGTCATCTGACTCTGAAGCAAGCCCCTCCCTCAGCCTTCTACCTACCAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATCTGACTCTGAAGCAAGCCCCTCCCTCAGCCTTCTACCTACCAT  696

seq1  TCTGGCCATAATCTACTTACCTGGTGAAGGTCTCCTTTGCATCCACAAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCATAATCTACTTACCTGGTGAAGGTCTCCTTTGCATCCACAAGT  746

seq1  GATATCCATCAGCCATCTTCAGGCCTCTGTTGAGCTCTCTGATCCCCCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCATCAGCCATCTTCAGGCCTCTGTTGAGCTCTCTGATCCCCCTT  796

seq1  TCTGCAGCCCATCTAATGAAGGCTGGAAGTGAACTGTTTACTGAAAAGGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCCCATCTAATGAAGGCTGGAAGTGAACTGTTTACTGAAAAGGC  846

seq1  TGAGCAGAGAGACAACTAACATGGACTCAATTTTCCAGAGCGCAAAGGCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGAGAGACAACTAACATGGACTCAATTTTCCAGAGCGCAAAGGCA  896

seq1  AGGCAGAGAAGTGCTGTCTTCCCATCGCAATGCCTCAGTCATTCTTCAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGAAGTGCTGTCTTCCCATCGCAATGCCTCAGTCATTCTTCAAT  946

seq1  ATGTGTGCTGCGAAGACCCTGAATCTCAAACACTGTTCAGGATACACCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCTGCGAAGACCCTGAATCTCAAACACTGTTCAGGATACACCTG  996

seq1  CACGAGTCTGTTTATGTGTATGTCACAAAGGGAAAAAGACAAGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGTCTGTTTATGTGTATGTCACAAAGGGAAAAAGACAAGAATTC  1044


seq1: chr1_79871975_79872820
seq2: B6Ng01-297N12.g_67_912

seq1  GAATTCCGAGAAAACTCAGCCTTTGACATTTGTGTGAAAGCACATGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGAGAAAACTCAGCCTTTGACATTTGTGTGAAAGCACATGTCCA  50

seq1  GGCGTGTATCTTTATGGAGAAGGGACTGTGAATGACCGCTGCATGGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTATCTTTATGGAGAAGGGACTGTGAATGACCGCTGCATGGTTCT  100

seq1  TCCTGCTGTTATCATGGCCACTCTCAATACATAGCAAATGGAATCTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTGTTATCATGGCCACTCTCAATACATAGCAAATGGAATCTTGAC  150

seq1  TTGCCAGGGCAGACAGCCTGGTGATTATTTCATTCAAAAAAGCTTGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGGCAGACAGCCTGGTGATTATTTCATTCAAAAAAGCTTGTTAA  200

seq1  AAGTTCTGGAAACAGATCTGATGAAGGAAGGTGTTTAATTGTTCCCCTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGGAAACAGATCTGATGAAGGAAGGTGTTTAATTGTTCCCCTCG  250

seq1  ATTTATAGTGAGCTCCAGAACAGGTTTAACATCTGCAAGCATATGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGTGAGCTCCAGAACAGGTTTAACATCTGCAAGCATATGAAAAC  300

seq1  TATAGAAGGGATCGTGACATGTTCTCCATCACTACTGATAATACATGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAGGGATCGTGACATGTTCTCCATCACTACTGATAATACATGATT  350

seq1  AAATTCAATAAATTCTAGGAGTAAGCAGGCAGTTCAGATGGCTCAGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAATAAATTCTAGGAGTAAGCAGGCAGTTCAGATGGCTCAGTGGT  400

seq1  TAAGAAACTATGTACTGCTATTGAAGAGGACCTGAGCTCAGGTCCCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACTATGTACTGCTATTGAAGAGGACCTGAGCTCAGGTCCCACAC  450

seq1  TCGCGCTGGGTGGCACACAACCACTTGTAACTCTTGTAACTCCAGAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCGCTGGGTGGCACACAACCACTTGTAACTCTTGTAACTCCAGAAGCA  500

seq1  TCCAATGTCTGTAGCCTCGCAAAGGCTTCTTGCACTCATATCACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGTCTGTAGCCTCGCAAAGGCTTCTTGCACTCATATCACACACAC  550

seq1  AATTAAAAGTAAAAGTAAGTATGTATTAAAAAAAAATCAGTTTAGCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAGTAAAAGTAAGTATGTATTAAAAAAAAATCAGTTTAGCTTCC  600

seq1  AGCCAGAAATGAGTATAGAGGTCACCCACTAGAGGAAAACCAGCTTCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAATGAGTATAGAGGTCACCCACTAGAGGAAAACCAGCTTCTAG  650

seq1  AATACAAAAGCTTAGGCCTGGTGTGGTGCCACATACCTTTAATACTAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAAAGCTTAGGCCTGGTGTGGTGCCACATACCTTTAATACTAGCA  700

seq1  CTCAAGATCTAAGGGCTAGGCAGATCTGAGTTTAAGGCCAGCCTGGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGATCTAAGGGCTAGGCAGATCTGAGTTTAAGGCCAGCCTGGTCTA  750

seq1  TAGAGACAGTACCAGGATAGGGACAGACTGGGCTATGCAGAGAAACCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGTACCAGGATAGGGACAGACTGGGCTATGCAGAGAAACCCTG  800

seq1  TCTCAGTGAGGGGAAGAGGGAGAATAAGAGGGAAGAAGGGAGGGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGAGGGGAAGAGGGAGAATAAGAGGGAAGAAGGGAGGGAG  846


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