BAC Information

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BAC

Clone NameB6Ng01-298E11
Chromosome1 (Build37)
Map Location 69,634,705 - 69,635,196
singlet/doubletsinglet
Overlap geneIkzf2
Upstream geneErbb4, LOC667842, EG241084
Downstream geneSpag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298E11.bB6Ng01-298E11.g
ACCGA093428GA093429
length9491,179
definitionB6Ng01-298E11.b B6Ng01-298E11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacacccctaaacctcttaccccataaaaactcctagcttccga
gcctcgtggccaacatcctttatctcctgtgtgggatgcatgtcggtcca
gagctctgtcattaaaccacctcgtgtaattacatctaggccttttcgtg
attctttgggtgcccgccgtttcaggaattgagtggggggtttccccact
aggtactatcagtttccctcttttggaagctgtcatgttatcttctgaat
ccatgatacctaattgtcagggaggagacattcaacttcgtttcagctca
gaggagctggcctctgtgcatggtgcttatcttacagctctggtgactaa
tgaaggacaacagaaatatgatgtatattttgggactttcaagaacaact
ctgacaaacaatacaaaaccaggtgtctcatggcctgttttggtgttttt
gtttgctaatctttggtttttggaggaacaacttacccaagataagaaaa
ttttacttaacctgatacatacatacatacatacatacatacatacatac
atacacacacacacacacacacacacacatacacacacatatatatatat
atatatatatatatatatatatatatatatatatatatacacacatatat
atacaaaaatatttactatacatacaaatgcataatacatattatatagg
catatatatatgtatatttattatgtaatatatatacatatatatgtata
aatataaatatagttttaatatagttttgtattatgtttttttagaaaac
taagaacattatttcttacatttttttttcagacatccttactgttattc
tcttttcttctgggttccacctttccattttcccatcatatctcatatat
cctgttatcccttttttctatttctccctaagccctctaactcagcatg

gaattcctgatctttccaaaacttttatcatgaatgggtgttgaatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcattcctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttcc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagcggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttaaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttttttggctgggagactatcaataactgcttctat
ttctttacgtgatatgggactgtttagatggtcaacttgatcctgactca
actttggtacctggtatctgtccagaaatttgtccatttcgtccaggttt
tccagttttgctgagtataaccttttgtagaaggatctgatggtgttttg
gatttcttcagggtctgttgttatgtctcccttttcatttctgattttgt
taattaggattttgtccctgtgccctttagtgagtcaagctaagggttaa
tctatcttgttgattttctcaaagaaccaactcctcgtttggttaattct
ttgaatagttcttctggtttccacttggttgatttcacccctgagtttga
ttatttcctgccgtctactcctcttgggtgaatttgcttcctttttttct
agagcttttagatgtgttgtcaagctgctagtatgtgctctctcccgttt
ctacttggaggcactcagagctatgagtttcccttctagaaatgtttttc
attgtgtcccaagttgtgtacattgtggccttcatttcataacttctaaa
agtctttaatttccttcctattcctactgaccgaggtatcatgaaagaag
gttgttcagattcccacggaatgttggcttcattacttaggtggcttatg
gagaatcagctctttaggccgccctgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69634705_69635196
seq2: B6Ng01-298E11.b_592_814

seq1  ------------------------ATACATACACACACACACATATATAT  26
                              | ||| ||| ||||||||||||||||
seq2  ATACATACACACACACACACACACACACACACATACACACACATATATAT  50

seq1  ATATATATATATATATATACATATACATATATATATATATATACACACAC  76
      ||||||||||||||||||| ||||| ||||||||||||||||||||||| 
seq2  ATATATATATATATATATATATATATATATATATATATATATACACACAT  100

seq1  ACACACACACACACA-----CACACACACACA-GCAGAAAGCAGTATTGT  120
      | | | ||| | | |      | ||| ||| | ||| ||  || ||||  
seq2  ATATATACAAAAATATTTACTATACATACAAATGCATAATACA-TATT--  147

seq1  CATATGCCAGTTGTGCGGAATAGAAATCAAGAAGCTACACCAAT--GGCA  168
       ||||           || ||| | ||     |  || |   ||   | |
seq2  -ATAT----------AGGCATATATAT-----ATGTATATTTATTATGTA  181

seq1  ATATTGATAAAAAGA-ATAAATAAATAAACAAAATTCGTACAAGTAAATT  217
      ||||  ||| | | | ||  ||||||| | || ||       |||   ||
seq2  ATATATATACATATATATGTATAAATATA-AATAT-------AGT---TT  220

seq1  TAGCCAGCGAAGCAAAAGAGCTCTTCGAGGAAAATAATAAAACCCCACTG  267
      ||                                                
seq2  TAA-----------------------------------------------  223

seq1  AAAGGCTTTAGAGCTGGTGAGACGGCTCCAGGAGGAAAAGTGCTTGCTGT  317
                                                        
seq2  --------------------------------------------------  223

seq1  CACGCCAGTATGTTCAAGTCTGATTCCTGCACCCCATGAGTGGAAGAAGA  367
                                                        
seq2  --------------------------------------------------  223

seq1  AAGCTGACCCTACTGAAAGTCCCACTCTGATGCTCTGACCTCACACATGC  417
                                                        
seq2  --------------------------------------------------  223

seq1  CAACAGCACACAAACACACACAAGCACACACACACATGCACACACTTCAC  467
                                                        
seq2  --------------------------------------------------  223

seq1  AGAGAATAAATAAATATAGTTTTAA  492
                               
seq2  -------------------------  223


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