MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-299H05
Chromosome	1 (Build37)
Map Location	55,097,166 - 55,219,492
singlet/doublet	doublet
Overlap gene	Sf3b1, Coq10b, Hspd1, Hspe1, LOC381258, Prei3, EG627998
Upstream gene	Hecw2, 4930511H11Rik, Gtf3c3, EG627915, D230012E17Rik, Ankrd44
Downstream gene	Rftn2, Mars2, LOC666793, Boll, EG632964, LOC667237, LOC626009, 9130227L01Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hecw2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329152 MGI:2685817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	4930511H11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78016 MGI:1925266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtf3c3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98488 MGI:2138383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627915 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627915 MGI:3645540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	D230012E17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241062 MGI:2443342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins

name	Ankrd44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329154 MGI:3045243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sf3b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81898 MGI:1932339
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coq10b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67876 MGI:1915126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hspd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15510 MGI:96242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspe1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15528 MGI:104680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC381258 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:381258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins pseudo : _no_value

name	Prei3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19070 MGI:104899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627998 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627998 MGI:3644721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 mRNAs, 286 ESTs, 5 Proteins

name	Rftn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74013 MGI:1921263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212679 MGI:2444136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666793 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 474 ESTs, 3 Proteins pseudo : _no_value

name	Boll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75388 MGI:1922638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG632964 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632964 MGI:3645964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	LOC667237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins pseudo : _no_value

name	LOC626009 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626009
definition	note : aldo-keto reductase family 1, member B3-like pseudo : _no_value

name	9130227L01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329159 MGI:2445084
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Hecw2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131081 GeneID:329152 MGI:2685817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 transcript_id : NM_001001883.2

name	Hecw2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369943 GeneID:329152 MGI:2685817
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 transcript_id : NM_172655.1

name	4930511H11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037516 GeneID:78016 MGI:1925266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930511H11 gene transcript_id : NM_030025.1

name	Gtf3c3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802741 GeneID:98488 MGI:2138383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : general transcription factor IIIC, polypeptide 3 transcript_id : NM_001033194.2

name	EG627915 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233841 GeneID:627915 MGI:3645540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG627915 transcript_id : XM_892615.3

name	D230012E17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233879 GeneID:241062 MGI:2443342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 3 Proteins product : RIKEN cDNA D230012E17 gene transcript_id : XM_892623.2

name	Ankrd44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487460 GeneID:329154 MGI:3045243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 44 transcript_id : NM_001081433.1

name	Sf3b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14042920 GeneID:81898 MGI:1932339
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : splicing factor 3b, subunit 1 transcript_id : NM_031179.1

name	Coq10b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337273 GeneID:67876 MGI:1915126
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coenzyme Q10 homolog B (S. cerevisiae) transcript_id : NM_001039710.1

name	Coq10b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89337265 GeneID:67876 MGI:1915126
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coenzyme Q10 homolog B (S. cerevisiae) transcript_id : NM_026424.3

name	Hspd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366334 GeneID:15510 MGI:96242
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 1 (chaperonin) transcript_id : NM_010477.3

name	Hspe1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892401 GeneID:15528 MGI:104680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock protein 1 (chaperonin 10) transcript_id : NM_008303.3

name	Prei3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347251 GeneID:19070 MGI:104899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : preimplantation protein 3 transcript_id : NM_025283.3

name	EG627998 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233882 GeneID:627998 MGI:3644721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 mRNAs, 286 ESTs, 5 Proteins product : predicted gene, EG627998 transcript_id : XM_892716.3

name	Rftn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625980 GeneID:74013 MGI:1921263
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : raftlin family member 2 transcript_id : NM_028713.1

name	Mars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461994 GeneID:212679 MGI:2444136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methionine-tRNA synthetase 2 (mitochondrial) transcript_id : NM_175439.3

name	Boll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375380 GeneID:75388 MGI:1922638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bol, boule-like (Drosophila) transcript_id : NM_029267.2

name	EG632964 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233845 GeneID:632964 MGI:3645964
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG632964 transcript_id : XM_989174.2

name	9130227L01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363400 GeneID:329159 MGI:2445084
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 9130227L01 gene transcript_id : XM_488894.3

name	Hecw2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49457861 CCDS:CCDS14956.1 GeneID:329152 MGI:2685817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; NEDD4-related E3 ubiquitin ligase NEDL2; HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2, isoform 2 product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 isoform 1 protein_id : NP_001001883.1

name	Hecw2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369944 CCDS:CCDS14957.1 GeneID:329152 MGI:2685817
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; NEDD4-related E3 ubiquitin ligase NEDL2; HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2, isoform 2 product : HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 isoform 2 protein_id : NP_766243.1

name	4930511H11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037517 GeneID:78016 MGI:1925266
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC78016 protein_id : NP_084301.1

name	Gtf3c3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677510 CCDS:CCDS14958.1 GeneID:98488 MGI:2138383
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : transcription factor IIIC-gamma subunit; TFIIIC 102 kDa subunit product : general transcription factor 3C polypeptide 3 protein_id : NP_001028366.1

name	EG627915 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233842 GeneID:627915 MGI:3645540
definition	codon_start : 1 product : similar to IIDS6411 protein_id : XP_897708.3

name	D230012E17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233880 GeneID:241062 MGI:2443342
definition	codon_start : 1 product : GPI deacylase protein_id : XP_897716.2

name	Ankrd44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487461 GeneID:329154 MGI:3045243
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : ankyrin repeat domain 44 protein_id : NP_001074902.1

name	Sf3b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14042921 GeneID:81898 MGI:1932339
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence ISS] [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence ISS] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] [Evidence ISS] codon_start : 1 exception : mismatches in translation note : transforming growth factor alpha regulated gene 4; splicing factor 3b, subunit 1, 155 kDa product : splicing factor 3b, subunit 1 protein_id : NP_112456.1

name	Coq10b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89337274 GeneID:67876 MGI:1915126
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : coenzyme Q10 homolog B isoform 1 protein_id : NP_001034799.1

name	Coq10b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89337266 CCDS:CCDS14959.1 GeneID:67876 MGI:1915126
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : coenzyme Q10 homolog B isoform 2 protein_id : NP_080700.3

name	Hspd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981679 GeneID:15510 MGI:96242
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 exception : mismatches in translation note : heat shock protein, 60 kDa; heat shock 60kDa protein 1 (chaperonin) product : heat shock protein 1 (chaperonin) protein_id : NP_034607.2

name	Hspe1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680309 GeneID:15528 MGI:104680
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0051087 - chaperone binding [Evidence ISS]; GO:0051082 - unfolded protein binding [Evidence ISS] GO_process : GO:0006919 - caspase activation [Evidence ISS]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock 10 kDa protein 1 (chaperonin 10); mitochondrial chaperonin 10 product : heat shock protein 1 (chaperonin 10) protein_id : NP_032329.1

name	Prei3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254521 CCDS:CCDS14960.1 GeneID:19070 MGI:104899
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : preimplantation protein 3 protein_id : NP_079559.2

name	EG627998 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82879266 GeneID:627998 MGI:3644721
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897809.1

name	Rftn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625981 CCDS:CCDS14962.1 GeneID:74013 MGI:1921263
definition	codon_start : 1 product : raftlin family member 2 protein_id : NP_082989.1

name	Mars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425166 CCDS:CCDS14963.1 GeneID:212679 MGI:2444136
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 product : mitochondrial methionyl-tRNA synthetase protein_id : NP_780648.1

name	Boll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077047 GeneID:75388 MGI:1922638
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence ISS]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 product : bol, boule-like protein_id : NP_083543.1

name	EG632964 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233846 GeneID:632964 MGI:3645964
definition	codon_start : 1 product : similar to Btf3 protein protein_id : XP_994268.2

name	9130227L01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51705010 GeneID:329159 MGI:2445084
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488894.1

name	(CDS detail)
type	STS
link
xref	UniSTS:224479
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162180
definition	standard_name : RH125358

name	(CDS detail)
type	STS
link
xref	UniSTS:224299
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:160910
definition	standard_name : RH114823

name	(CDS detail)
type	STS
link
xref	UniSTS:234126
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234128
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:209419
definition	standard_name : BB257479

name	(CDS detail)
type	STS
link
xref	UniSTS:161646
definition	standard_name : RH124824

name	(CDS detail)
type	STS
link
xref	UniSTS:207157
definition	standard_name : AW990637

name	(CDS detail)
type	STS
link
xref	UniSTS:226068
definition	standard_name : Sf3b1

name	(CDS detail)
type	STS
link
xref	UniSTS:167578
definition	standard_name : D8Ertd563e

name	(CDS detail)
type	STS
link
xref	UniSTS:178391
definition	standard_name : AV002237

name	(CDS detail)
type	STS
link
xref	UniSTS:217066
definition	standard_name : RH133783

name	(CDS detail)
type	STS
link
xref	UniSTS:210798
definition	standard_name : RH127488

name	(CDS detail)
type	STS
link
xref	UniSTS:181116
definition	standard_name : AW108200

name	(CDS detail)
type	STS
link
xref	UniSTS:161042
definition	standard_name : RH124220

name	(CDS detail)
type	STS
link
xref	UniSTS:249713
definition	standard_name : AA818419

name	(CDS detail)
type	STS
link
xref	UniSTS:222324
definition	standard_name : RH140245

name	(CDS detail)
type	STS
link
xref	UniSTS:207160
definition	standard_name : AI839641

name	(CDS detail)
type	STS
link
xref	UniSTS:207159
definition	standard_name : AI853746

name	(CDS detail)
type	STS
link
xref	UniSTS:207158
definition	standard_name : AI317354

name	(CDS detail)
type	STS
link
xref	UniSTS:273229
definition	standard_name : PMC34683P1

name	(CDS detail)
type	STS
link
xref	UniSTS:224188
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224943
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234129
definition

name	LOC381258 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233843 GeneID:381258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033385.1

name	LOC666793 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233887 GeneID:666793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 474 ESTs, 3 Proteins product : similar to ribosomal protein S24 pseudo : _no_value transcript_id : XR_033941.1

name	LOC667237 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233847 GeneID:667237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 14 Proteins product : similar to aldose reductase pseudo : _no_value transcript_id : XR_033419.1

clone name	MSMg01-309F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-097N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379J03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-265P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-132G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-299H05.b	B6Ng01-299H05.g
ACC	GA094288	GA094289
length	226	1,100
definition	B6Ng01-299H05.b	B6Ng01-299H05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(55,219,267 - 55,219,492)	(55,097,166 - 55,098,272)
sequence	caggacagccagggctacacagagaaaccctgcctcgaaactgccccccc cccaaaaaaaaagaaaaaaaaaaccccacaacttacatgctattcaatga aacttcctaacttttgagacaaaaatgactgatgtgatagatcaaaactt tcaatcagcgagagtttcaaaaaagaaaggagggagagaaggaaggaaag gagagagggagagggagaggaagaga	gaattcaccttcagtagtccatgggctggggccaagcctataagacctga gtctttgaggaacatttaagatgaaaactaagtattcttctcttggagcc actcatactctccagaatttacttactatcctcatctgagtctccttttt cttcttgggcataagacaacaaacttagacaatactggctttgggtggct ttggtgactattgattatctggggtcctagtaccataatgtaagcttttc cagaaaggctccactagagtgagagtagatgtgggctagtgagctgggaa ataaagtagccactcaaaagctttggatattttaaatatcacaataaagt agttgatcttagatgctgggctttttgggattccactgaattttgattcc ccaatgttgtaaactacagcaaggcagcgggcaagggtaagagggtatct ggctggctaggctcatgtctcttccgtccctattgttggtgctggcacta ccacagtggtgaatgggagacctgggagctcagctgcctgtcctgtacag gctacccaaacatccttgcttcttgtctaaaagctgtaatacttcttgtg tttgcaacctgacctaagccccgtggaacctattcatccaggttccacat tgccctttgggccaacagaggatgacaaagaaaccctatataaagcctac ttcctgctcagttttttgctacctctcacccaaagcagagacggctcccc tcttgtgtcttacccaataaatcttatacgtgagttattccttgtgggtc taactttcaggatacctttccctttagagctgcaacactattagggaaat ctttccctcagatctgtgacccttatgaagtagaactttgtgagtttttg tttttgtttttgtttttgaaagtcagttgtgtcagatggtttttgctgga gcagtatgtgaaagagtgttttcttgaaacagaaacaggtgagaggatgt ttccatatgcagaaaacacaaacgaatgtttttgctgagtagatgaaaga ttcttttttaagattatttaatatacagtaggtacactgtgctggacaca
quality values	Open. Hide. 32 25 62 62 59 43 59 62 62 59 43 62 62 62 54 62 62 59 51 62 59 62 59 59 59 62 49 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 43 62 62 62 62 62 62 35 9 12	Open. Hide. 62 47 39 42 62 47 51 54 62 62 62 47 44 47 47 56 56 59 59 35 44 62 62 62 62 62 62 62 62 62 62 62 59 51 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 59 59 59 62 62 62 62 62 59 59 62 59 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 52 58 58 49 54 58 49 58 58 58 54 48 54 58 58 58 54 54 58 54 54 47 58 58 58 58 58 58 54 58 58 58 58 54 54 38 58 54 58 58 58 54 37 58 58 58 58 54 58 58 58 51 58 58 58 58 53 58 54 58 51 50 51 51 49 58 58 58 49 48 58 48 42 58 58 58 52 58 49 58 54 58 58 58 58 58 53 49 58 58 50 58 49 50 58 58 58 49 58 58 58 50 50 50 53 52 50 58 58 54 53 58 58 53 54 42 58 58 50 50 49 50 47 58 51 58 49 35 54 52 52 49 50 53 58 58 58 54 50 58 50 58 44 26 58 52 53 49 51 52 42 51 54 51 39 49 49 50 49 52 50 52 51 52 53 52 51 50 58 58 49 39 42 50 54 51 40 40 35 49 52 49 53 53 25 49 38 25 51 38 32 24 54 54 37 51 54 31 42 33 44 38 52 53 39 53 32 54 51 35 52 54 39 40 37 46 53 37 33 39 51 32 52 38 42 32 39 54 54 54 54 51 36 35 42 29 39 36 53 45 41 40 33 32 54 37 26 54 38 37 45 32 28 53 32 34 40 26 33 26 37 31 49 49 53 45 35 40 36 53 32 52 31 52 34 32 32 29 51 47 37 53 45 40 53 32 33 53 33 31 43 39 31 41 30 42 42 43 31 30 38 32 31 31 31 42 30 30 51 30 30 46 46 28 30 31 31 31 31 41 46 30 31 9 17 23 36 25 27 30 42 31 48 46 31 46 38 33 48 42 35 32 42 28 31 37 30 31 23 29 38 29 31 41 29 31 31 33 18 46 31 33 46 32 32 43 38 48 36 31 48 31 31 32 26 13 30 32 26 31 37 30 31 31 14 46 30 14 27 28 31 31 38 37 38 32 36 30 33 31 31 31 48 33 26 25 31 37 21 25 44 47 41 31 26 25 44 44 41 27 24 19 44 47 44 33 26 29 48 48 48 31 20 31 48 31 25 34 35 32 26 22 29 31 14 22 19 31 21 8 31 19 25 23 7 37 48 43 30 21 30 32 21 18 23 10 32 4 4 9 24 32 31 32 23 30 48 25 14 33 8 16 17 19 34 48 27 32 11 14 29 25 33 21 16 21 13 21 28 15 16 11 25 28 24 28 27 13 14 8 9 13 7 23 17 40 24 9 11 16 11 7 4 6 14 27 12 27 34 28 7 11 9 20 11 34 20 13 15 22 18 4 7 9 18 34 38 15 20 23 24 10 27 6 6 6 5 22 16 12 17 30 15 10 20 8 7 22 9 30 30 26 28 9 13 12 9 18 17 13 9 10 28 24 5 5 18 5 11 5 4 7 6 5 7 13 15 6 4 6 4 18 5 6 5 7 15 10 7 13 7 8 9 21 10

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_55219267_55219492
seq2: B6Ng01-299H05.b_48_273 (reverse)

seq1  TCTCTTCCTCTCCCTCTCCCTCTCTCCTTTCCTTCCTTCTCTCCCTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTCTCCCTCTCCCTCTCTCCTTTCCTTCCTTCTCTCCCTCCTT  50

seq1  TCTTTTTTGAAACTCTCGCTGATTGAAAGTTTTGATCTATCACATCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTGAAACTCTCGCTGATTGAAAGTTTTGATCTATCACATCAGTC  100

seq1  ATTTTTGTCTCAAAAGTTAGGAAGTTTCATTGAATAGCATGTAAGTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTCAAAAGTTAGGAAGTTTCATTGAATAGCATGTAAGTTGTG  150

seq1  GGGTTTTTTTTTTCTTTTTTTTTGGGGGGGGGGCAGTTTCGAGGCAGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTTTTTTTCTTTTTTTTTGGGGGGGGGGCAGTTTCGAGGCAGGGT  200

seq1  TTCTCTGTGTAGCCCTGGCTGTCCTG  226
      ||||||||||||||||||||||||||
seq2  TTCTCTGTGTAGCCCTGGCTGTCCTG  226

seq1: chr1_55097166_55098272
seq2: B6Ng01-299H05.g_65_1164

seq1  GAATTCACCTTCAGTAGTCCATGGGCTGGGGCCAAGCCTATAAGACCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTCAGTAGTCCATGGGCTGGGGCCAAGCCTATAAGACCTGA  50

seq1  GTCTTTGAGGAACATTTAAGATGAAAACTAAGTATTCTTCTCTTGGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGAGGAACATTTAAGATGAAAACTAAGTATTCTTCTCTTGGAGCC  100

seq1  ACTCATACTCTCCAGAATTTACTTACTATCCTCATCTGAGTCTCCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATACTCTCCAGAATTTACTTACTATCCTCATCTGAGTCTCCTTTTT  150

seq1  CTTCTTGGGCATAAGACAACAAACTTAGACAATACTGGCTTTGGGTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGGCATAAGACAACAAACTTAGACAATACTGGCTTTGGGTGGCT  200

seq1  TTGGTGACTATTGATTATCTGGGGTCCTAGTACCATAATGTAAGCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACTATTGATTATCTGGGGTCCTAGTACCATAATGTAAGCTTTTC  250

seq1  CAGAAAGGCTCCACTAGAGTGAGAGTAGATGTGGGCTAGTGAGCTGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGCTCCACTAGAGTGAGAGTAGATGTGGGCTAGTGAGCTGGGAA  300

seq1  ATAAAGTAGCCACTCAAAAGCTTTGGATATTTTAAATATCACAATAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTAGCCACTCAAAAGCTTTGGATATTTTAAATATCACAATAAAGT  350

seq1  AGTTGATCTTAGATGCTGGGCTTTTTGGGATTCCACTGAATTTTGATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATCTTAGATGCTGGGCTTTTTGGGATTCCACTGAATTTTGATTCC  400

seq1  CCAATGTTGTAAACTACAGCAAGGCAGCGGGCAAGGGTAAGAGGGTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTGTAAACTACAGCAAGGCAGCGGGCAAGGGTAAGAGGGTATCT  450

seq1  GGCTGGCTAGGCTCATGTCTCTTCCGTCCCTATTGTTGGTGCTGGCACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTAGGCTCATGTCTCTTCCGTCCCTATTGTTGGTGCTGGCACTA  500

seq1  CCACAGTGGTGAATGGGAGACCTGGGAGCTCAGCTGCCTGTCCTGTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGGTGAATGGGAGACCTGGGAGCTCAGCTGCCTGTCCTGTACAG  550

seq1  GCTACCCAAACATCCTTGCTTCTTGTCTAAAAGCTGTAATACTTCTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCCAAACATCCTTGCTTCTTGTCTAAAAGCTGTAATACTTCTTGTG  600

seq1  TTTGCAACCTGACCTAAGCCCCGTGGAACCTATTCATCCAGGTTCCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAACCTGACCTAAGCCCCGTGGAACCTATTCATCCAGGTTCCACAT  650

seq1  TGCCCTTTGGGCCAACAGAGGATGACAAAGAAACCCTATATAAAGCCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTTGGGCCAACAGAGGATGACAAAGAAACCCTATATAAAGCCTAC  700

seq1  TTCCTGCTCAGTTTTTTGCTACCTCTCACCCAAAGCAGAGACGGCTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTCAGTTTTTTGCTACCTCTCACCCAAAGCAGAGACGGCTCCCC  750

seq1  TCTTGTGTCTTACCCAATAAATCTTATACGTGAGTTATTCCTTGTGGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTCTTACCCAATAAATCTTATACGTGAGTTATTCCTTGTGGGTC  800

seq1  TAACTTTCAGGATACCTTTCCCTTTAGAGCTGCAACACTATTAGGGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCAGGATACCTTTCCCTTTAGAGCTGCAACACTATTAGGGAAAT  850

seq1  CTTTCCCTCAGATCTGTGACCCTTATGAAGTAGAACTTTGTGAGTTTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTCAGATCTGTGACCCTTATGAAGTAGAACTTTGTGAGTTTTTG  900

seq1  TTTTTGTTTTTGTTTTTGAAAGTCAGTTGTGTCAGATGGTTTTTTGCTGG  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTTTGTTTTTGTTTTTGAAAGTCAGTTGTGTCAGATGG-TTTTTGCTGG  949

seq1  AGCAGGTATGTGAAAGAGTGTTTTCTTGAAACAGAAACAGGTGAGAGGAT  1000
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCA-GTATGTGAAAGAGTGTTTTCTTGAAACAGAAACAGGTGAGAGGAT  998

seq1  GTTTCCATAAGGCAG-AAACACAAACGAATGTTTTTGCTGAAGTAGATGA  1049
      |||||||| | |||| |||||||||||||||||||||||| |||||||||
seq2  GTTTCCAT-ATGCAGAAAACACAAACGAATGTTTTTGCTG-AGTAGATGA  1046

seq1  AAGATTCTTTTTAAAGATTTATTTATTATTACAAGTAGGTACACTGTTGC  1099
      |||||||||||| |||| ||||||| || ||| ||||||||||||| |||
seq2  AAGATTCTTTTTTAAGA-TTATTTAATA-TAC-AGTAGGTACACTG-TGC  1092

seq1  TGGACACA  1107
      ||||||||
seq2  TGGACACA  1100

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information