MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-299K12
Chromosome	8 (Build37)	1 (Build37)
Map Location	25,685,245 - 25,685,523	102,155,993 - 102,157,082
singlet/doublet	singlet	singlet
Overlap gene	Indol1
Upstream gene	LOC100040931, Zmat4, 1810011O10Rik
Downstream gene	Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zmat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320158 MGI:2443497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810011O10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69068 MGI:1916318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Indol1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209176 MGI:2142489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Indo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15930 MGI:96416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13524 MGI:105986
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11497 MGI:102518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11499 MGI:104730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam32 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353188 MGI:2653822
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11502 MGI:105376
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tm2d2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69742 MGI:1916992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htra4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330723 MGI:3036260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekha2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83436 MGI:1928144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042390 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Tacc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320165 MGI:2443510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC670822 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670822
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100040998 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 74 ESTs, 2 Proteins

name	Fgfr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14182 MGI:95522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100040931 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258525 GeneID:100040931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100040931 transcript_id : XM_001475506.1

name	Zmat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130346 GeneID:320158 MGI:2443497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, matrin type 4 transcript_id : NM_177086.2

name	1810011O10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802249 GeneID:69068 MGI:1916318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810011O10 gene transcript_id : NM_026931.2

name	Indol1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122378 GeneID:209176 MGI:2142489
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : indoleamine-pyrrole 2,3 dioxygenase-like 1 transcript_id : NM_145949.1

name	Indo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680346 GeneID:15930 MGI:96416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : indoleamine-pyrrole 2,3 dioxygenase transcript_id : NM_008324.1

name	Adam18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753683 GeneID:13524 MGI:105986
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 18 transcript_id : NM_010084.1

name	Adam3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949803 GeneID:11497 MGI:102518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 3 (cyritestin) transcript_id : NM_009619.4

name	Adam5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677439 GeneID:11499 MGI:104730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 5 transcript_id : NM_007401.2

name	Adam32 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23510258 GeneID:353188 MGI:2653822
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 32 transcript_id : NM_153397.1

name	Adam9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680643 GeneID:11502 MGI:105376
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 9 (meltrin gamma) transcript_id : NM_007404.1

name	Tm2d2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802111 GeneID:69742 MGI:1916992
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TM2 domain containing 2 transcript_id : NM_027194.2

name	Htra4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487142 GeneID:330723 MGI:3036260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HtrA serine peptidase 4 transcript_id : NM_001081187.1

name	Plekha2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543492 GeneID:83436 MGI:1928144
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 transcript_id : NM_031257.2

name	LOC100042390 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258563 GeneID:100042390
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042390 transcript_id : XM_001478131.1

name	Tacc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681725 GeneID:320165 MGI:2443510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 1 transcript_id : NM_199323.2

name	Tacc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681726 GeneID:320165 MGI:2443510
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transforming, acidic coiled-coil containing protein 1 transcript_id : NM_177089.4

name	LOC100040998 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258527 GeneID:100040998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 74 ESTs, 2 Proteins product : hypothetical protein LOC100040998 transcript_id : XM_001475629.1

name	Fgfr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120952640 GeneID:14182 MGI:95522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 1 transcript_id : NM_010206.2

name	Fgfr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120952697 GeneID:14182 MGI:95522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 1 transcript_id : NM_001079908.1

name	Fgfr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120952632 GeneID:14182 MGI:95522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor receptor 1 transcript_id : NM_001079909.1

name	LOC100040931 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258526 GeneID:100040931
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475556.1

name	Zmat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893005 CCDS:CCDS22192.1 GeneID:320158 MGI:2443497
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : zinc finger, matrin type 4 protein_id : NP_796060.1

name	1810011O10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312200 CCDS:CCDS22194.1 GeneID:69068 MGI:1916318
definition	codon_start : 1 product : thyroid cancer-1 protein_id : NP_081207.1

name	Indol1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122379 GeneID:209176 MGI:2142489
definition	GO_function : GO:0020037 - heme binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : indoleamine-pyrrole 2,3 dioxygenase-like 1 protein_id : NP_666061.1

name	Indo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680347 GeneID:15930 MGI:96416
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0004426 - indoleamine-pyrrole 2,3-dioxygenase activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence TAS]; GO:0006955 - immune response [Evidence IEA]; GO:0019441 - tryptophan catabolism to kynurenine [Evidence IDA] codon_start : 1 note : indole 2,3-dioxygenase product : indoleamine-pyrrole 2,3 dioxygenase protein_id : NP_032350.1

name	Adam18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753684 CCDS:CCDS22195.1 GeneID:13524 MGI:105986
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005178 - integrin binding [Evidence ISS]; GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : disintegrin 3 product : a disintegrin and metalloprotease domain 18 protein_id : NP_034214.1

name	Adam3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949804 CCDS:CCDS22196.1 GeneID:11497 MGI:102518
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0045121 - lipid raft [Evidence IDA] GO_process : GO:0007339 - binding of sperm to zona pellucida [Evidence IMP] [Evidence IDA] codon_start : 1 note : cyritestin product : a disintegrin and metalloprotease domain 3 (cyritestin) protein_id : NP_033749.2

name	Adam5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677440 GeneID:11499 MGI:104730
definition	GO_function : GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 note : a disintegrin and metalloprotease domain (ADAM) 5 product : a disintegrin and metalloprotease domain 5 protein_id : NP_031427.2

name	Adam32 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510259 GeneID:353188 MGI:2653822
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : a disintegrin and metalloprotease domain 32 protein_id : NP_700446.1

name	Adam9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680644 GeneID:11502 MGI:105376
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : meltrin gamma; a disintegrin and metalloproteinase domain 9 (meltrin gamma) product : a disintegrin and metalloprotease domain 9 (meltrin gamma) protein_id : NP_031430.1

name	Tm2d2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312394 CCDS:CCDS22197.1 GeneID:69742 MGI:1916992
definition	codon_start : 1 exception : mismatches in translation product : BBP-like protein 1 protein_id : NP_081470.1

name	Htra4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487143 GeneID:330723 MGI:3036260
definition	codon_start : 1 product : HtrA serine peptidase 4 protein_id : NP_001074656.1

name	Plekha2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13752587 CCDS:CCDS22198.1 GeneID:83436 MGI:1928144
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005545 - phosphatidylinositol binding [Evidence IDA] codon_start : 1 note : pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2andem PH Domain containing protein 2 product : pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 2 protein_id : NP_112547.1

name	LOC100042390 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258564 GeneID:100042390
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478181.1

name	Tacc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556391 GeneID:320165 MGI:2443510
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence TAS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA] codon_start : 1 note : short isoform is encoded by transcript variant 2 product : transforming acidic coiled-coil containing protein 1 short isoform protein_id : NP_955355.1

name	Tacc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681727 GeneID:320165 MGI:2443510
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence TAS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA] codon_start : 1 note : long isoform is encoded by transcript variant 1 product : transforming acidic coiled-coil containing protein 1 long isoform protein_id : NP_796063.3

name	LOC100040998 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258528 GeneID:100040998
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475679.1

name	Fgfr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120952641 GeneID:14182 MGI:95522
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence TAS]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0048514 - blood vessel morphogenesis [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0048469 - cell maturation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0001759 - induction of an organ [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IGI] [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : fibroblast growth factor receptor 1 isoform 1 protein_id : NP_034336.2

name	Fgfr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120952698 GeneID:14182 MGI:95522
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence TAS]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0048514 - blood vessel morphogenesis [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0048469 - cell maturation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0001759 - induction of an organ [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IGI] [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : fibroblast growth factor receptor 1 isoform 2 protein_id : NP_001073377.1

name	Fgfr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120952633 GeneID:14182 MGI:95522
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005007 - fibroblast growth factor receptor activity [Evidence TAS]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0001525 - angiogenesis [Evidence IGI]; GO:0048514 - blood vessel morphogenesis [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0048754 - branching morphogenesis of a tube [Evidence IMP]; GO:0048469 - cell maturation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IGI]; GO:0001759 - induction of an organ [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IGI] [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0002053 - positive regulation of mesenchymal cell proliferation [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : fibroblast growth factor receptor 1 isoform 3 protein_id : NP_001073378.1

name	LOC670822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670822
definition	number : 1 pseudo : _no_value

name	LOC670822 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670822
definition	number : 2 pseudo : _no_value

clone name	MSMg01-078A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294J10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-526A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-205E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-299K12.b	B6Ng01-299K12.g
ACC	GA094435	GA094436
length	709	1,089
definition	B6Ng01-299K12.b	B6Ng01-299K12.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(25,685,245 - 25,685,523)	(102,155,993 - 102,157,082)
sequence	gaattcctacaaactcattgaaacttaaaaacattctactcaatgattac tgtgtcagagaagtaataaagaaagaattcagagactttctagaattcaa tgaaaatgaaggtacaatgtacctaaaataatgggaaatgatggaagcag tgctaacaggaaacttcacagtaataagtgcctccagaaagaaatttgag aattctcatattacaaatttaaaactacacttgaaagctctaggaggagg agggaaaaagacacactaaaaagtgatagagggcaaaagacaatcaaatt cagtgatgagatcaatcaactagaaataaggagaacaatacaaagaatca acaaacccaagtattgtttattctaaaaatcaataatatagacaaaccct tagccaaattaactaaaagataaaaatacagaataaagaaaaagaaatgt aaagggacgtataaaagcagacattgaggaaagtcaaagaatcattaggt cttacttcaaagcctatactctacaaaattcaaaaatcttaacaaaatag atgattttctagacaaataccacttactaagctaaatcatgatcaggtaa actacttaaatattcctatgaccataaataaataaatatatagccatgat taaaattcccctaacttaaaaaagccagggccagatggtgtgtgtgtgtg tgtgtgtgt	gaattcacatagaaaccagcataaatgtacaagtgtctaatcccagttct gggggaatagataaaagcagatccctggagctcattgccttaccaacgta actgataattaaacctagatgcacagagagttatatctgatgaatcaaaa tgaaatacttattattgaggaaagaatccctgtctgcctgttgctaccac acatacatacacacatgtgcatatgctgccatgtgtatacacatggtgta taaacatagtggatgaggagaattttcacatcttcacactgatgcccttc taatatggctagtcattgttagaagcttgaaatttactttgggaaatctg gaaaaggaagaaatgccatagcgaagtccatgatttttaaagaaccattc cttctttgggtgaagttggagtcaaggtgaagagaactaactatttaggc attcttactacaaagacaaaacatgacaacttaattctgggaatgttgga gactgtactatagttagttcttcctctgtctctgtttttgtctgtgtctg tggaagggatggcaatttttcatcatgtatgttttacttctgtgtatgta agagtatgaggagtaaaagtcagagaaaaatcttcagcagtaaaatttct ccttttattacgtgcaccccagaaattaaacttgaaatccaacacttttt cccatggtgctatttctctgtcctcttgcaatactattttaataaaaaaa tttaagcagtgttatttgaacagagtggggctctccaagaaagaacagga catatccagatatgagtatggacttataatgaacagtaaatattgagtgc cttaccattggccttatatattattttgctagctctcagggtacatctga cagaagtgttaaaagaccttacacagtgtcctttcttccgagaagtaaaa ttttagggtagctatagatgtgtctttgagaaggatatattagtaaagct aatatctggagccatttgggttacaataaagtgttttctgtgaagcttgg gaaaattgagctttcagcagaaaaggagagaaaggcaat
quality values	Open. Hide. 46 31 29 31 62 62 62 62 62 47 21 62 62 62 62 47 42 62 62 62 47 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 46 49 43 62 59 43 62 62 62 59 59 59 62 59 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 59 62 54 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 54 62 59 59 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 42 58 58 58 54 58 58 52 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 45 58 58 36 58 58 58 58 54 51 58 58 51 49 58 51 58 58 58 45 51 58 58 58 58 58 53 53 58 58 58 58 52 58 58 58 58 54 58 58 54 51 58 51 58 58 51 54 58 58 58 54 53 58 58 51 53 58 58 58 58 58 58 58 58 58 54 54 58 58 37 46 47 58 58 58 51 51 51 58 51 52 53 58 49 51 53 53 53 58 58 58 58 54 53 58 58 51 39 41 53 58 58 58 49 54 53 54 54 54 51 53 52 52 54 53 53 54 54 54 54 54 49 51 46 40 51 54 54 51 54 53 49 51 34 54 54 53 54 54 54 42 51 33 54 53 54 51 54 52 54 47 54 42 46 27 9 9	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr8_25685245_25685523
seq2: B6Ng01-299K12.b_716_750 (reverse)

seq1  ACACACACACACACACACACACCCTCAGCAAATCCCCTGAGGGCTCTCGA  50
      ||||||||||||||||||||||| || |     |||  |           
seq2  ACACACACACACACACACACACCATCTG----GCCCTGG-----------  35

seq1  ACCAATTCCGAGAACAAAGGAGAAATCTGACTTTTAATAACTTTACGAGG  100
                                                        
seq2  --------------------------------------------------  35

seq1  CACCAGGAAGTCATGTCAGACACTTTAGTTTATAGCAGGGCCTGCGTGAC  150
                                                        
seq2  --------------------------------------------------  35

seq1  AAGGAGCACAGAGGAGCCGGGAGCCGTCGGCTGCAAGCTATCATGTCAGA  200
                                                        
seq2  --------------------------------------------------  35

seq1  GTACAGTCTGCTTCCTAACTGTCCGTGAGAGAGCAGCAGGAAGGCCTGGC  250
                                                        
seq2  --------------------------------------------------  35

seq1  TTGATTCAAGCTGTGAGATCTGGCCCTGG  279
                                   
seq2  -----------------------------  35

seq1: chr1_102155993_102157082
seq2: B6Ng01-299K12.g_67_1155

seq1  GAATTCACATAGAAACCAGCATAAATGTACAAGTGTCTAATCCCAGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAGAAACCAGCATAAATGTACAAGTGTCTAATCCCAGTTCT  50

seq1  GGGGGAATAGATAAAAGCAGATCCCTGGAGCTCATTGCCTTACCAACGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAATAGATAAAAGCAGATCCCTGGAGCTCATTGCCTTACCAACGTA  100

seq1  ACTGATAATTAAACCTAGATGCACAGAGAGTTATATCTGATGAATCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAATTAAACCTAGATGCACAGAGAGTTATATCTGATGAATCAAAA  150

seq1  TGAAATACTTATTATTGAGGAAAGAATCCCTGTCTGCCTGTTGCTACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATACTTATTATTGAGGAAAGAATCCCTGTCTGCCTGTTGCTACCAC  200

seq1  ACATACATACACACATGTGCATATGCTGCCATGTGTATACACATGGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATACACACATGTGCATATGCTGCCATGTGTATACACATGGTGTA  250

seq1  TAAACATAGTGGATGAGGAGAATTTTCACATCTTCACACTGATGCCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATAGTGGATGAGGAGAATTTTCACATCTTCACACTGATGCCCTTC  300

seq1  TAATATGGCTAGTCATTGTTAGAAGCTTGAAATTTACTTTGGGAAATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGGCTAGTCATTGTTAGAAGCTTGAAATTTACTTTGGGAAATCTG  350

seq1  GAAAAGGAAGAAATGCCATAGCGAAGTCCATGATTTTTAAAGAACCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAAGAAATGCCATAGCGAAGTCCATGATTTTTAAAGAACCATTC  400

seq1  CTTCTTTGGGTGAAGTTGGAGTCAAGGTGAAGAGAACTAACTATTTAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGGGTGAAGTTGGAGTCAAGGTGAAGAGAACTAACTATTTAGGC  450

seq1  ATTCTTACTACAAAGACAAAACATGACAACTTAATTCTGGGAATGTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTACTACAAAGACAAAACATGACAACTTAATTCTGGGAATGTTGGA  500

seq1  GACTGTACTATAGTTAGTTCTTCCTCTGTCTCTGTTTTTGTCTGTGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTACTATAGTTAGTTCTTCCTCTGTCTCTGTTTTTGTCTGTGTCTG  550

seq1  TGGAAGGGATGGCAATTTTTCATCATGTATGTTTTACTTCTGTGTATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGGATGGCAATTTTTCATCATGTATGTTTTACTTCTGTGTATGTA  600

seq1  AGAGTATGAGGAGTAAAAGTCAGAGAAAAATCTTCAGCAGTAAAATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATGAGGAGTAAAAGTCAGAGAAAAATCTTCAGCAGTAAAATTTCT  650

seq1  CCTTTTATTACGTGCACCCCAGAAATTAAACTTGAAATCCAACACTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATTACGTGCACCCCAGAAATTAAACTTGAAATCCAACACTTTTT  700

seq1  CCCATGGTGCTATTTCTCTGTCCTCTTGCAATACTATTTTAATAAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTGCTATTTCTCTGTCCTCTTGCAATACTATTTTAATAAAAAAA  750

seq1  TTTAAGCAGTGTTATTTGAACAGAGTGGGGCTCTCCAAGAAAGAACAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCAGTGTTATTTGAACAGAGTGGGGCTCTCCAAGAAAGAACAGGA  800

seq1  CATATCCAGATATGAGTATGGACTTATAATGAACAGTAAATATTGAGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCAGATATGAGTATGGACTTATAATGAACAGTAAATATTGAGTGC  850

seq1  CTTACCATTGGCCTTATATATTATTTTGCTAGCTCTCAGGGTACATCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCATTGGCCTTATATATTATTTTGCTAGCTCTCAGGGTACATCTGA  900

seq1  CAGAAGTGTTAAAAGACCTTACACAGTGTCCTTTCTTCCGAGAAGTAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGTTAAAAGACCTTACACAGTGTCCTTTCTTCCGAGAAGTAAAA  950

seq1  TTTTAGGGTAGCTATAGATGTGTCTTTGAGAAGGATATAATTAGTAAAGC  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTAGGGTAGCTATAGATGTGTCTTTGAGAAGGATAT-ATTAGTAAAGC  999

seq1  TAATATCTGGAGCCATTTGGGTTAC-ATAAAGTG-TTTCTGTTGAAAGCT  1048
      ||||||||||||||||||||||||| |||||||| |||||||   |||||
seq2  TAATATCTGGAGCCATTTGGGTTACAATAAAGTGTTTTCTGT--GAAGCT  1047

seq1  TTGGAAAATTGAAGCTTTTCAGCAGAAA--GAGAGAAAGGCAAT  1090
      | ||||||||| ||| ||||||||||||  ||||||||||||||
seq2  TGGGAAAATTG-AGC-TTTCAGCAGAAAAGGAGAGAAAGGCAAT  1089

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information