BAC Information

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BAC

Clone NameB6Ng01-299L19
Chromosome1 (Build37)
Map Location 125,525,398 - 125,526,518
singlet/doubletsinglet
Overlap geneDpp10
Upstream geneLOC666983
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299L19.bB6Ng01-299L19.g
ACCGA094494GA094495
length1,1861,125
definitionB6Ng01-299L19.b B6Ng01-299L19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgctaacaactgagatcaaaaagaactccacctaaggtcctc
ttaatcttagaagccagggtaagggctccgtgcccttgccatagttacta
gtttagtctattgtatagtccaccttccccctaggccattgtaaatatgt
gtgtatgggtgtaactcagctatctatagttctaagtatctattctggtt
cctccttaggtctcaaacttccttcttcctagtttgtaaattcctgtgta
gggcagtgtcttagcttttattcaaagtgatagtgtaatgccagaggcaa
ttctgaatgtcactgaataggcaaaattcttactgaatttcaagcccatg
gtcagctcaaggactttctaggaagttggaacactggtgaagacttagaa
ttcaatcttaaaaggcacttataataagataatactaaaagagagcatgt
ggatccatacaccagactaacgcgggaatggaatatgagtatatgggtta
aagagaacgccagactccaggaggtgagtttccgtgaaactctgcctcat
gagtggcttccaggcctctcggcctgtcaagctgactcgaccggagtgca
tggcaaaggaagaatgtccctgcatcagctttgaagatttttggccttat
tgaactttctgttgtctttctcagctccctgtgtgcagataaaatctaaa
ttctttgattccattcctcttcctcctgccatgcttctccaaccattaca
acctcaatctctataaaactgtaagcccaaacaaaccctttgttccctaa
attggttttgatcataatattttatcacagcaacagagagcaaagtagaa
cacccacatacaatctgtacttattttacacacttttgaaataaagtaat
ccatttgtcatgctgtagctaagtatcttccatatatttgcagcctcatt
caaattcacctctgagaaatttccatataacaactttagttctaactctt
tgtgctatagtcacatgtacaacaagtgagctttgcactcatgcttattg
tagcactatttcagctagtcactgtataagcagattgttgttgtagtcct
cacaatagagccaagtttccaagtcctgtagtatccctgtttcagatcca
tgccaatgcaatttgttaagctggttatataaatcg
gaattcaaatcatctgttcctagtacttcattatgtaaaccattagattt
caaatacagaggagccgggcgtggtggcacaggcctttaatcccagcact
cgggaggcagaggcaggcaaatttctgagttcgaggccagccaggtctac
acagtgagttccaggacagccagggctatacagagaaaccctgtctcaaa
aaaacaaaaaagaacaaacataccaaaaaaaaaaaaaataaaatccagag
gaaaactctctgcaattacataagagaacttgctagctatcctgtagctt
tattttagcctaactagcaactcttctatttataataacttttagatttt
tcttgaaggggcagtctcttacatcatggagagcaaacagaaaaaaatat
tcatgctgaaggaaagggtacagtgttgtgggatgatgtcctccatgcat
gatgaggtattgcactatgagaatctcaacagctgggattaaacacgtga
gacctacatcaacccgagcctctcaacaattcatcatgaagggaaaggag
gcacatgaggactcctccacacctgagggcttatacgcagtcagttgagg
gttgactgagaaaacaggcttaggagatatcacctctacctgagagttta
tagggagttaaaagttgcaagcaaacaatggttcatataactctacccct
gccctaggtaaagagtgctaggtggagaaacatacattttctttaactgt
ctaaccactgacatgagagttgcccactagtcacagtcctaggccctata
aataactctacctctcttcttgtacagaagaactaactaatttttcaata
aaaggaaagagtttacactgtgtgtgggtcacaaaagtagaataactaga
atttatttcaggaaaggcaagaggatcaggaatactaggaggaataagac
agggtaatagcagtggcaagcatgaccaaaatgcattatgtccatgcatg
gaaactcctactaaaacgcataactatgtagaattagtaaattctgatta
caggagtactgtctctttgcctgggtctgaatggatcaaattagttttgg
cagaaaaatagttcactaagctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125525398_125526518
seq2: B6Ng01-299L19.g_70_1194

seq1  GAATTCAAATCATCTGTTCCTAGTACTTCATTATGTAAACCATTAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCATCTGTTCCTAGTACTTCATTATGTAAACCATTAGATTT  50

seq1  CAAATACAGAGGAGCCGGGCGTGGTGGCACAGGCCTTTAATCCCAGCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACAGAGGAGCCGGGCGTGGTGGCACAGGCCTTTAATCCCAGCACT  100

seq1  CGGGAGGCAGAGGCAGGCAAATTTCTGAGTTCGAGGCCAGCCAGGTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGCAGAGGCAGGCAAATTTCTGAGTTCGAGGCCAGCCAGGTCTAC  150

seq1  ACAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAA  200

seq1  AAAACAAAAAAGAACAAACATACCAAAAAAAAAAAAAATAAAATCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAAGAACAAACATACCAAAAAAAAAAAAAATAAAATCCAGAG  250

seq1  GAAAACTCTCTGCAATTACATAAGAGAACTTGCTAGCTATCCTGTAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCTCTGCAATTACATAAGAGAACTTGCTAGCTATCCTGTAGCTT  300

seq1  TATTTTAGCCTAACTAGCAACTCTTCTATTTATAATAACTTTTAGATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGCCTAACTAGCAACTCTTCTATTTATAATAACTTTTAGATTTT  350

seq1  TCTTGAAGGGGCAGTCTCTTACATCATGGAGAGCAAACAGAAAAAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAGGGGCAGTCTCTTACATCATGGAGAGCAAACAGAAAAAAATAT  400

seq1  TCATGCTGAAGGAAAGGGTACAGTGTTGTGGGATGATGTCCTCCATGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGAAGGAAAGGGTACAGTGTTGTGGGATGATGTCCTCCATGCAT  450

seq1  GATGAGGTATTGCACTATGAGAATCTCAACAGCTGGGATTAAACACGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGTATTGCACTATGAGAATCTCAACAGCTGGGATTAAACACGTGA  500

seq1  GACCTACATCAACCCGAGCCTCTCAACAATTCATCATGAAGGGAAAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTACATCAACCCGAGCCTCTCAACAATTCATCATGAAGGGAAAGGAG  550

seq1  GCACATGAGGACTCCTCCACACCTGAGGGCTTATACGCAGTCAGTTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGAGGACTCCTCCACACCTGAGGGCTTATACGCAGTCAGTTGAGG  600

seq1  GTTGACTGAGAAAACAGGCTTAGGAGATATCACCTCTACCTGAGAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTGAGAAAACAGGCTTAGGAGATATCACCTCTACCTGAGAGTTTA  650

seq1  TAGGGAGTTAAAAGTTGCAAGCAAACAATGGTTCATATAACTCTACCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGTTAAAAGTTGCAAGCAAACAATGGTTCATATAACTCTACCCCT  700

seq1  GCCCTAGGTAAAGAGTGCTAGGTGGAGAAACATACATTTTCTTTAACTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGGTAAAGAGTGCTAGGTGGAGAAACATACATTTTCTTTAACTGT  750

seq1  CTAACCACTGACATGAGAGTTGCCCACTAGTCACAGTCCTAGGCCCTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCACTGACATGAGAGTTGCCCACTAGTCACAGTCCTAGGCCCTATA  800

seq1  AATAACTCTACCTCTCTTCTTGTACAGAAGAACTAACTAATTTTTCAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCTACCTCTCTTCTTGTACAGAAGAACTAACTAATTTTTCAATA  850

seq1  AAAGGAAAGAGTTTACACTGTGTGTGGGTCACAAAAGTAGAATAACTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGAGTTTACACTGTGTGTGGGTCACAAAAGTAGAATAACTAGA  900

seq1  A-TTATTTCAGGAAAGGCAAGAGGATCAGGAATACTAGGAGGAATAAGAC  949
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCAGGAAAGGCAAGAGGATCAGGAATACTAGGAGGAATAAGAC  950

seq1  AGGGTAATAGCAGTGGCAAGCATGACCAAAATGCATTATGTCCATGCATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAATAGCAGTGGCAAGCATGACCAAAATGCATTATGTCCATGCATG  1000

seq1  GAAACTCCTACTAAAACGCATAACTATGTAGAATTAGTAAATTCTGATTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCCTACTAAAACGCATAACTATGTAGAATTAGTAAATTCTGATTA  1050

seq1  CAGGAGTACTGTCTC-TTGCCT-GGTCTGAATGGTTCAAA-TAATTTTGG  1096
      ||||||||||||||| |||||| ||||||||||| ||||| || ||||||
seq2  CAGGAGTACTGTCTCTTTGCCTGGGTCTGAATGGATCAAATTAGTTTTGG  1100

seq1  CAG--AAATAGTTTCACCAAAGCTACT  1121
      |||  |||||| |||| | ||||||||
seq2  CAGAAAAATAG-TTCA-CTAAGCTACT  1125