BAC Information

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BAC

Clone NameB6Ng01-300D24
Chromosome1 (Build37)
Map Location 76,164,053 - 76,165,207
singlet/doubletsinglet
Overlap genenone
Upstream geneZfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream geneLOC100039137, Tfdp1-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300D24.bB6Ng01-300D24.g
ACCGA094874GA094875
length1,2091,159
definitionB6Ng01-300D24.b B6Ng01-300D24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctaaagatgtt
caacatccttcgtcttcagggaaatgcaaatcaaaaggacactgagattc
tacctcacaccagtcagaatggttaagatcaaaaactcagatgacagcag
atgctggggaggttgtggagaaagaggaacactcctccactgctggtggg
ataacaagctggtacaaccactatggaaatcagtctggcagttcctcaga
aaattggacatagtactacctgaggacccagcaataccactcctgcacat
atacccagaagctgctccaacatgtaataagatcacatgctctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaacg
aagtactactcagctactaaaaacaatgaattcatgagattcttagacaa
aaagatggaattagaaaatatcatcctgagtgaggtaacccaatcacaaa
agaaaacacatggtgttcactcactgataagtggatattaaccagaagct
tggaatatccaagatacaattcacagaccacattaagctccagaagaagg
aagaccaaagtatgaatacttcggtccttcttagaagggggaacaaaata
cccatggaaggagttacagaggcaaagtatagatcagagactaaaggaat
gacaagccaagagaatgccccacctggggatccatcccatatagtcacca
aactgaggtactcatgtggattccaacaagagcttgctgacagaaacctg
ttatatctgtctcctgagaagctctaccagtacctgacaaatacagatgt
ggatgctcacagcctaccattggactgaacaaaggatccccaatgaagga
gctagagaaaggacccaaggagctgaagaggtttgcagccccataggagg
aacaacaatatgaactaatcagtacccccaaactcccagggactaaacta
caaccaaagagtacacatagtgggactcatagcccttagctgcatacgta
gcagaagatgggcctggtagtcatcattgggaggaagcagttggtctggt
aaggctctatgccaatgtaggtaacccatgtcttgcaacagaaatgtggt
gtgggtatg
gaattcagttctcacaaggtggaatttggtgttaactcagaaatcttggt
ggttgtggattcctttgctgccctttgatctccctgtgaagactgtcaca
tattaagaatcagattagcctgtggttcgctgccagttcccaggcgcaca
tttgcctgcaatgacttgctcacagagccttccctgctagccagtcattc
cattctcatacctgaagcctgtcatcagatctcctccccaaatgggtgtc
tcacttatattgacacagggaatgtgactctaggcttttttgagtaaaca
gttctgcacaatagaggtggggccagattaaacaacaaaaacctgggatt
aggttgtttggtccctgcttccctgaggtgagctcacttgctcaaggtgc
tacccttgcaagtctgagttctggaatacaaggtgggtggtgctaaacgg
cctgtgggttttgttgcaactgggaattcaccttgtttgcatgccggtca
caatgagatggagcccttttaagattaattattaattaatattaatctgc
acattaatagaatgtgtagataagccagttgttagcctgcatttctatgg
atatatgattttcattcttaattagacctgattgcttgagaagcaggggt
aacatcaacatatattctcattgttagagcaagcagcaaggcagatccga
tttccaactctacggttagtttgaaagtttgagctgggaatgtgaattac
ctttctctctgatttctctggtgtaggttattgttatgctaattcgggtg
tatgtcttcctggaccttataagtatatgaatcttgtgttcttttgagca
aattggatagttaatcctttaatcagttgttgagagattgctgagagcac
agaggcagacaggacctctgagctcagcagtctgaaggtcatcattttta
ttcattcagtgtttcttctttcttttcctcccatctattaaataggaaag
taagcctaattcttcaacaaggataagcacttcatgggaattgaagtggg
gaaccttgggaatggagaaatgtcttagaatgcacatgattagaatggat
gcttactcggaagacagaactttgaaccaagctcctcttggtcccaccaa
ctgtatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_76164053_76165207
seq2: B6Ng01-300D24.g_67_1225

seq1  GAATTCAGTTCTCACAAGGTGGAATTTGGTGTTAACTCAGAAATCTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCTCACAAGGTGGAATTTGGTGTTAACTCAGAAATCTTGGT  50

seq1  GGTTGTGGATTCCTTTGCTGCCCTTTGATCTCCCTGTGAAGACTGTCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGGATTCCTTTGCTGCCCTTTGATCTCCCTGTGAAGACTGTCACA  100

seq1  TATTAAGAATCAGATTAGCCTGTGGTTCGCTGCCAGTTCCCAGGCGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGAATCAGATTAGCCTGTGGTTCGCTGCCAGTTCCCAGGCGCACA  150

seq1  TTTGCCTGCAATGACTTGCTCACAGAGCCTTCCCTGCTAGCCAGTCATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTGCAATGACTTGCTCACAGAGCCTTCCCTGCTAGCCAGTCATTC  200

seq1  CATTCTCATACCTGAAGCCTGTCATCAGATCTCCTCCCCAAATGGGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCATACCTGAAGCCTGTCATCAGATCTCCTCCCCAAATGGGTGTC  250

seq1  TCACTTATATTGACACAGGGAATGTGACTCTAGGCTTTTTTGAGTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTATATTGACACAGGGAATGTGACTCTAGGCTTTTTTGAGTAAACA  300

seq1  GTTCTGCACAATAGAGGTGGGGCCAGATTAAACAACAAAAACCTGGGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCACAATAGAGGTGGGGCCAGATTAAACAACAAAAACCTGGGATT  350

seq1  AGGTTGTTTGGTCCCTGCTTCCCTGAGGTGAGCTCACTTGCTCAAGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTTGGTCCCTGCTTCCCTGAGGTGAGCTCACTTGCTCAAGGTGC  400

seq1  TACCCTTGCAAGTCTGAGTTCTGGAATACAAGGTGGGTGGTGCTAAACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTGCAAGTCTGAGTTCTGGAATACAAGGTGGGTGGTGCTAAACGG  450

seq1  CCTGTGGGTTTTGTTGCAACTGGGAATTCACCTTGTTTGCATGCCGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGTTTTGTTGCAACTGGGAATTCACCTTGTTTGCATGCCGGTCA  500

seq1  CAATGAGATGGAGCCCTTTTAAGATTAATTATTAATTAATATTAATCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGATGGAGCCCTTTTAAGATTAATTATTAATTAATATTAATCTGC  550

seq1  ACATTAATAGAATGTGTAGATAAGCCAGTTGTTAGCCTGCATTTCTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATAGAATGTGTAGATAAGCCAGTTGTTAGCCTGCATTTCTATGG  600

seq1  ATATATGATTTTCATTCTTAATTAGACCTGATTGCTTGAGAAGCAGGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGATTTTCATTCTTAATTAGACCTGATTGCTTGAGAAGCAGGGGT  650

seq1  AACATCAACATATATTCTCATTGTTAGAGCAAGCAGCAAGGCAGATCCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAACATATATTCTCATTGTTAGAGCAAGCAGCAAGGCAGATCCGA  700

seq1  TTTCCAACTCTACGGTTAGTTTGAAAGTTTGAGCTGGGAATGTGAATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACTCTACGGTTAGTTTGAAAGTTTGAGCTGGGAATGTGAATTAC  750

seq1  CTTTCTCTCTGATTTCTCTGGTGTAGGTTATTGTTATGCTAATTCGGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTGATTTCTCTGGTGTAGGTTATTGTTATGCTAATTCGGGTG  800

seq1  TATGTCTTCCTGGACCTTATAAGTATATGAATCTTGTGTTCTTTTGAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTCCTGGACCTTATAAGTATATGAATCTTGTGTTCTTTTGAGCA  850

seq1  AATTGGATAGTTAATCCTTTAATCAGTTGTTGAGAGATTGCTGAGAGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGATAGTTAATCCTTTAATCAGTTGTTGAGAGATTGCTGAGAGCAC  900

seq1  AGAGGCAGACAGGACCTCTGAGCTCAGCAGTCTGAAGGTCATCATTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGACAGGACCTCTGAGCTCAGCAGTCTGAAGGTCATCATTTTTA  950

seq1  TTCATTCAGTGTTTCTTCTTTCTTTTCCTCCCATCTATTAAATAGGAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAGTGTTTCTTCTTTCTTTTCCTCCCATCTATTAAATAGGAAAG  1000

seq1  TAAGCCTAATCCTTCAACAAGGATAAGCACTTCATGGGAAATTGAAAGGT  1050
      |||||||||| ||||||||||||||||||||||||||| ||||| |||  
seq2  TAAGCCTAATTCTTCAACAAGGATAAGCACTTCATGGG-AATTG-AAGTG  1048

seq1  GGGAACC-TGGGA--TGAGAAATGTCCTTAGGATGCACATGA-TAGA--T  1094
      ||||||| |||||   ||||||||| ||||| |||||||||| ||||   
seq2  GGGAACCTTGGGAATGGAGAAATGT-CTTAGAATGCACATGATTAGAATG  1097

seq1  GATGC-TACTCGGGAGAGCAG-ACCTTGACCCAGCCTCCTCTTGTCCCCA  1142
      ||||| ||||||| ||| ||| || |||| |||  |||||||||  ||||
seq2  GATGCTTACTCGGAAGA-CAGAACTTTGAACCAAGCTCCTCTTGGTCCCA  1146

seq1  CCCACTGTATCAT  1155
      || ||||||||||
seq2  CCAACTGTATCAT  1159