BAC Information

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BAC

Clone NameB6Ng01-300F22
Chromosome1 (Build37)
Map Location 172,800,699 - 172,955,467
singlet/doubletdoublet
Overlap geneDusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b, Fcgr4
Upstream geneLOC100039960, 1700084C01Rik, Hsd17b7, Ddr2, LOC100040571, Uap1, Uhmk1, Sh2d1b2, EG622708, Sh2d1b1, EG665574, 1700015E13Rik, Nos1ap, LOC100040002, LOC640532, Olfml2b, Atf6
Downstream geneFcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4, B4galt3, Ppox, Usp21, Ufc1, EG622236, Dedd, Nit1, Pfdn2, 1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r, Refbp2, Itlna, Cd244, Ly9, Slamf7, Cd48, LOC100041098, Slamf1, Cd84, Slamf6, Vangl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300F22.bB6Ng01-300F22.g
ACCGA094965GA094966
length444934
definitionB6Ng01-300F22.b B6Ng01-300F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(172,800,699 - 172,801,148)(172,954,745 - 172,955,467)
sequence
ttcacaattctaaattcaaacctgactccaaggtcactatgaaagtatgt
tcattaaaagagtaaaaccatttattggtcatgaatatgtaacctggaga
taattggtaagccttagtttatactctagtggtaacctaccaatcactac
tggcttgagggaaaaaaaaaagaaactaatgaaatcacaccttagtttta
ttgtgtctcatcagactattagattttatcagatcagcattacactataa
gttatatattaccctgaagagggaagccaaacattgggatatagagatta
aagttaagatttctactgtcagtcttggatctgatttggattcaaccaca
tccgtgctcagagatagtgctagttaaagttagccgctcacaaaagagaa
acaaaaaaccatgaaagttgggggtggggggttaagggtgggaa
gaattctgaatgtggatctcttctgcagggcaaggttatcaccccatcct
agaagcaatggaaatccaggctgagaattgtcctacattctcagatcaca
catgacctttagtctaaagaagaagacatgtacacacaccacacacacat
acacacacacacacacacacacacacacacacacacacacagagacagag
agacagagagagacacacagagacacacacatacacacagagacagagag
acagagagagacacacagagatacacacacacacatacacacagagacag
agagacagagagagacacacagagacacacacatatacacacagagacag
agagacagagagagacacacagagacacacacacacacagacacacacac
acaccacacacacacacagacagagagacagagagagatacacagagaga
cagagagaggcagagagagacacacagagctacacacacacacatacaca
cagagacagagagagacagagagagacacacagagagagagagagagaga
gagagagagagaatgagagaatgagatctacaacgaaggagaagagaaac
aaagttgaggatatctgcagaattcctatatgctgggcttacattcagca
ggtaataaggacacagtatttccaaaccaattatatttaaaaatgggttt
ctaagtcaggtggtgtagtgcatgccttataatcccagtacttgggaggc
agaagcaggctgagctctgtgaattcaaggccagtctgatctacagagtg
agttccaggacagccaggggctacatagagaaaccctgtctctaaaaaac
taaaccaaaagccaaaatcaaaatacgctttcttacatttttgttttttt
taagtttagagttttagaagatacagggatgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_172800699_172801148
seq2: B6Ng01-300F22.b_44_493

seq1  GAATTCTTCACAATTCTAAATTCAAACCTGACTCCAAGGTCACTATGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACAATTCTAAATTCAAACCTGACTCCAAGGTCACTATGAAA  50

seq1  GTATGTTCATTAAAAGAGTAAAACCATTTATTGGTCATGAATATGTAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTCATTAAAAGAGTAAAACCATTTATTGGTCATGAATATGTAACC  100

seq1  TGGAGATAATTGGTAAGCCTTAGTTTATACTCTAGTGGTAACCTACCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATAATTGGTAAGCCTTAGTTTATACTCTAGTGGTAACCTACCAAT  150

seq1  CACTACTGGCTTGAGGGAAAAAAAAAAGAAACTAATGAAATCACACCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTGGCTTGAGGGAAAAAAAAAAGAAACTAATGAAATCACACCTTA  200

seq1  GTTTTATTGTGTCTCATCAGACTATTAGATTTTATCAGATCAGCATTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTGTGTCTCATCAGACTATTAGATTTTATCAGATCAGCATTACA  250

seq1  CTATAAGTTATATATTACCCTGAAGAGGGAAGCCAAACATTGGGATATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGTTATATATTACCCTGAAGAGGGAAGCCAAACATTGGGATATAG  300

seq1  AGATTAAAGTTAAGATTTCTACTGTCAGTCTTGGATCTGATTTGGATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAGTTAAGATTTCTACTGTCAGTCTTGGATCTGATTTGGATTCA  350

seq1  ACCACATCCGTGCTCAGAGATAGTGCTAGTTAAAGTTAGCCGCTCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATCCGTGCTCAGAGATAGTGCTAGTTAAAGTTAGCCGCTCACAAA  400

seq1  AGAGAAACAAAAAACCATGAAAGTTGGGGGTGGGGGGTTAAGGGTGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACAAAAAACCATGAAAGTTGGGGGTGGGGGGTTAAGGGTGGGAA  450

seq1: chr1_172954745_172955467
seq2: B6Ng01-300F22.g_67_789 (reverse)

seq1  ATGCACTACACCACCTGACTTAGAAACCCATTTTTAAATATAATTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTACACCACCTGACTTAGAAACCCATTTTTAAATATAATTGGTTT  50

seq1  GGAAATACTGTGTCCTTATTACCTGCTGAATGTAAGCCCAGCATATAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATACTGTGTCCTTATTACCTGCTGAATGTAAGCCCAGCATATAGGA  100

seq1  ATTCTGCAGATATCCTCAACTTTGTTTCTCTTCTCCTTCGTTGTAGATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCAGATATCCTCAACTTTGTTTCTCTTCTCCTTCGTTGTAGATCT  150

seq1  CATTCTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTCT  200

seq1  CTCTCTGTCTCTCTCTGTCTCTGTGTGTATGTGTGTGTGTGTAGCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTCTCTCTGTCTCTGTGTGTATGTGTGTGTGTGTAGCTCTGT  250

seq1  GTGTCTCTCTCTGCCTCTCTCTGTCTCTCTGTGTATCTCTCTCTGTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCTCTCTGCCTCTCTCTGTCTCTCTGTGTATCTCTCTCTGTCTCT  300

seq1  CTGTCTGTGTGTGTGTGTGGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTGTGTGTGTGTGGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTC  350

seq1  TCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTATATGTGTGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTATATGTGTGTGTC  400

seq1  TCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTATGTGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTATGTGTGTGTGTG  450

seq1  TATCTCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTATGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTATGTGTGTG  500

seq1  TCTCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTGTGTGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTGTCTCTCTCTGTCTCTCTGTCTCTGTGTGTGTGTGTGTGTG  550

seq1  TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGGTGTGTGTACATGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGGTGTGTGTACATGTCT  600

seq1  TCTTCTTTAGACTAAAGGTCATGTGTGATCTGAGAATGTAGGACAATTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTAGACTAAAGGTCATGTGTGATCTGAGAATGTAGGACAATTCT  650

seq1  CAGCCTGGATTTCCATTGCTTCTAGGATGGGGTGATAACCTTGCCCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGATTTCCATTGCTTCTAGGATGGGGTGATAACCTTGCCCTGCA  700

seq1  GAAGAGATCCACATTCAGAATTC  723
      |||||||||||||||||||||||
seq2  GAAGAGATCCACATTCAGAATTC  723