BAC Information

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BAC

Clone NameB6Ng01-300M17
Chromosome1 (Build37)
Map Location 101,872,238 - 101,873,011
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300M17.bB6Ng01-300M17.g
ACCGA095278GA095279
length1,007956
definitionB6Ng01-300M17.b B6Ng01-300M17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgtttttaattgctgagtagtactccattgtgtaaatgtatc
acattttctgcatccattcctctgttgagggacatctgggttcttttcag
cttctggctattataaataaggctgctattaacatagtagagcatgtgtt
cttattaccagttggaactttttctgggtatatgcccaggagaggaattg
ctggatcttttggtagtactatatcaaattttctgaggaaccgccagact
gatttccagagtggttgtacaagcttgcaatcccaccagcaatggaggag
tgtccctatttctccacatcctcaccagcatctgctgtcacctgaatttt
tgatcttagtcatcctgactggtatgaggtggaatctcaggattgttttg
atatgcatttacctgatgattaaggatgttgaacactttttcaggtgctt
ctaatccattcagtattcctcagttgagaattttttgtttagctctgtac
cctgaactccacataaaactagagacactgtaacttatagtggagaaaga
gggggaaagcctcaaagagatgggcacatgggaaatattcctgaacagaa
cagcaatggcttgtgctgtaagattgagaattgacaaatgggtcttcata
aaattgcaaagcttctgtaaggcaaaagacactgtcaataagacaaaaag
ggcaccaacagattgggaaatgatctttaccaatcctaaatcagataagg
gatatatccaatatatataaagaactcaagaagatcactccagaaaatca
aataaccctattaaatttgttctcttaaatattatattaggctcctttaa
tttctaaagcaaactccttagtcgtctgctttactgataaaaattataga
ctatagagaatagttcttgaaaactctgaagcaaatataaagcattgact
tttcagcacaagattttgtttttgtcgttttttgtgtatgtttttgtttg
ttttttt

gaattcagtagaataaaagactttttgcttttgcatactatttgagactg
ggacatcattcttcagcaaatcatggacactaacaagggaacatcaggca
catagcctagatatcagagtccctaaatggggaaggagaactcaaggaat
taccagattctggaccagggagatactggctcaagaaagatctcgggatt
atgaagactggaaacaaatctcttcagacaggcagaaaaaaaaatctctt
acatgggtattgaaattaggcatctaataccgaatggcagagaagcacct
gaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaa
cactgagattccacttcactccagtcagaatggctaagatcaaaaactca
ggtgacagcagatgctggcgaggatgtggagaaaggggaacactcctcca
ttgttggtgggattgcaagcttgtacaaccactcttggaaatcagtctgg
cgtttcctcagaaaatttgacatagtactaccagaggatcccgcaatacc
tctcctgggcatatatccagaagatgtcccaaccagtaagaagaacacat
gctccactatgttcatagaagccttatttataatagccagaagctggaaa
gaacccagatgcccctcaacagaggaatggatacagaaaatgtggtacat
ttacacaatggaatactactcagctataaaaaaaatgaatttatgaaatt
cctaggcaaatggatggacctggagggcatcatcctgagtgaagtaacct
aatcacaaaggaactcgcacaatatgtactcactgataagtggatattag
cccagaaacttaggatacccaagatataagatacaagttgccaaacacat
gaaattcaagaagaacgaagacaaagtgtggacactttaccctttcttag
aaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_101872238_101873011
seq2: B6Ng01-300M17.g_67_840

seq1  GAATTCAGTAGAATAAAAGACTTTTTGCTTTTGCATACTATTTGAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGAATAAAAGACTTTTTGCTTTTGCATACTATTTGAGACTG  50

seq1  GGACATCATTCTTCAGCAAATCATGGACACTAACAAGGGAACATCAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCATTCTTCAGCAAATCATGGACACTAACAAGGGAACATCAGGCA  100

seq1  CATAGCCTAGATATCAGAGTCCCTAAATGGGGAAGGAGAACTCAAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCTAGATATCAGAGTCCCTAAATGGGGAAGGAGAACTCAAGGAAT  150

seq1  TACCAGATTCTGGACCAGGGAGATACTGGCTCAAGAAAGATCTCGGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGATTCTGGACCAGGGAGATACTGGCTCAAGAAAGATCTCGGGATT  200

seq1  ATGAAGACTGGAAACAAATCTCTTCAGACAGGCAGAAAAAAAAATCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACTGGAAACAAATCTCTTCAGACAGGCAGAAAAAAAAATCTCTT  250

seq1  ACATGGGTATTGAAATTAGGCATCTAATACCGAATGGCAGAGAAGCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGTATTGAAATTAGGCATCTAATACCGAATGGCAGAGAAGCACCT  300

seq1  GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA  350

seq1  CACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAACTCA  400

seq1  GGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCA  450

seq1  TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTTGGAAATCAGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTTGGAAATCAGTCTGG  500

seq1  CGTTTCCTCAGAAAATTTGACATAGTACTACCAGAGGATCCCGCAATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCTCAGAAAATTTGACATAGTACTACCAGAGGATCCCGCAATACC  550

seq1  TCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAGAAGAACACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAGAAGAACACAT  600

seq1  GCTCCACTATGTTCATAGAAGCCTTATTTATAATAGCCAGAAGCTGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACTATGTTCATAGAAGCCTTATTTATAATAGCCAGAAGCTGGAAA  650

seq1  GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACAT  700

seq1  TTACACAATGGAATACTACTCAGCTATAAAAAAAATGAATTTATGAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAATGGAATACTACTCAGCTATAAAAAAAATGAATTTATGAAATT  750

seq1  CCTAGGCAAATGGATGGACCTGGA  774
      ||||||||||||||||||||||||
seq2  CCTAGGCAAATGGATGGACCTGGA  774


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