BAC Information

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BAC

Clone NameB6Ng01-301B23
Chromosome1 (Build37)
Map Location 193,961,328 - 193,961,570
singlet/doubletsinglet
Overlap geneRcor3
Upstream gene4933417M04Rik, Atf3, Nenf, 2310028N02Rik, Ppp2r5a, LOC100039501, LOC667044, Dtl, Ints7, Lpgat1, Nek2, 4930557M11Rik, Slc30a1, 3322402L07Rik, LOC100042611, Traf5, Traf5, LOC100042625
Downstream geneKcnh1, Hhat, A730013G03Rik, Sertad4, LOC100039677, Syt14, AA408296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301B23.bB6Ng01-301B23.g
ACCGA095517GA095518
length2421,156
definitionB6Ng01-301B23.b B6Ng01-301B23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agggatccgagcttggtattcagctccgactctcatcccaacatctgcaa
agcaatgccaagatatatggtaaaatggtaataaataaggagaggagagg
ggaagggcaaggcagagactctccagccgcgggagcgcgggcgaggccgt
ggccgggtgggggcggggaggcgcgggtcgcgggctgcggcggcaccggg
agttccggcggccgcggctcggctccgaggggaggagggtgc
gaattcaataggaatgaaaactgaacacatcaggaccagtggggtgcgac
tgaggcagaactaaaagagaggcatgcagagacaaaacaggagtcctggc
caatgatccaacccctcaccttaagaacctctgtcaagaacaagctagaa
caaagcaagcagaagggatgacaggcagcagagtcagtcggagccaaagc
aaaattagagagcacagccagtagtttttaaaagattagaaataatactg
ggactgaggagtggcttgtagctcagtgatcaaggccctgggttcaatcc
ccagcagcaaaatatacagtaaaagtggttaaaaaaaaaaaacaaaaaaa
aaactgtcaaagaaaagcaaatgactaaggatgaaagagtcagcgtcact
cctgggaacaccagagaccagaaaccacttcaagggacagcaatgacaac
ttggtacttagaagcttcaacaaatggattcccaaaagacatacagtatg
ggaacccacagcccaaaaccaagggactaccttcttactgttcaacttcc
caaagcagataaaaccaaggtttaaatccccaaagcagatctctctgggc
ccagaaggtcttaatgaataacatttccaaatttaaagatgaagtcacag
caaatttgcacaatttcttacagaaaatatcagcagaatggacagttcac
aattctttctgtgaaatttagtgttaccttgattcccaaaccaaagacag
catagaaaacaacaaatatcccttcataaacatatatataaaagttctta
acagttggcagcagacagcatttagcagtattcaaaaaaatgaattacta
tagcaacatatttcagaagtgtaagctaattcaatatttggaaagattgg
tgattgataaattcagtacccatttatgaatattttaaaaagtggaaata
agaatatggggatttttttattacaagaacgaagaaaagaagatgagagg
tactgataatgatggggcaagagtggcacagcctgtgtgtgatctaacag
ctaccatcacttattcaggaactccagtgcttgccacttaggatggaaaa
tgcagatcactctatagctcgctaaccgtatttgcatataacatggtggt
agtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_193961328_193961570
seq2: B6Ng01-301B23.b_57_298

seq1  AGGGATCCGAGCTTGGTATTCAGCTCCGACTCTCATCCCAACATCTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCCGAGCTTGGTATTCAGCTCCGACTCTCATCCCAACATCTGCAA  50

seq1  AGCAATGCCAAGATATATGGTAAAATGGTAATAAATAAGGAGAGGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGCCAAGATATATGGTAAAATGGTAATAAATAAGGAGAGGAGAGG  100

seq1  GGAAGGGCAAGGCAGAGACTCTCCAGCCGCGGGAGCGCGGGCGAGGCCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGCAAGGCAGAGACTCTCCAGCCGCGGGAGCGCGGGCGAGGCCGT  150

seq1  GGCCGGGTGGGGGCGGGGAGGCGCGGGTCGCGGGCTGCGGCGGCACCGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGGTGGGGGCGGGGAGGCGCGGGTCGCGGGCTGCGGCGGCACCGGG  200

seq1  AGTTCCGGCGGCCGCGGCTCGGCTCCGAGGGGGAGGAGGGCGC  243
      |||||||||||||||||||||||||||| ||||||||||| ||
seq2  AGTTCCGGCGGCCGCGGCTCGGCTCCGA-GGGGAGGAGGGTGC  242