BAC Information

Click to search

BAC

Clone NameB6Ng01-302F01
Chromosome1 (Build37)
Map Location 114,981,161 - 114,982,237
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626897, LOC666615, LOC666635
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302F01.bB6Ng01-302F01.g
ACCGA096394GA096395
length1,1781,065
definitionB6Ng01-302F01.b B6Ng01-302F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttatcattatatatgtgtgcaggggcaactttttgggattga
ataatctgtcagggtgattgactttagagaagattgattgcctttttcta
tacgcattaattgcttatagttcttcaaaaatttgtggggcctagtgaga
gttcttccatttgtgttgttaaactatcttgcattgcattttgcaggcct
tgtttaggaaccatatttttgagacttcatggttacagaatttgtcagtg
ctgtgctatgccaactactgtctgttgtttataaattccctcttaattga
actatttcatccagaattgagacttgtagaaatttagtaagtaaataatg
tttaaattcaggaactaaattactcacaagtctcaaaatattcctgaatc
ttagaatattaagaagtcctcttttcaatggatttaggatctattctata
taatccataatctcagccaagtctttttttaaaacaatttttattagata
tcgtattcatttacatttcaaacactatccggaaagttccctatagcctc
cccttgccttgttccccaagccacccactcctaattcctggccctggcat
tcccctgaagtggggcatataatctttgcaagaccaagggcctctcctcc
caatgatggatgattaggccatcttctgctacatattcagctagagacat
gagctcaggggtgacaggttagttcatatcgctgttcctcctataggttt
acagacccattctgctccttgggtaatttctctagctcctcaattggggg
ccctgtattttgtccaatagatgactgtgagcatacatttttgtatttga
caggcactggcatagcctcacacgagacagctatatcagtgtcatgtcag
caaaattttgctggcatatacaatagtgtctgtgtttggtggctgattat
ggtatgggtcctgggttggggcagtctctggatggtcctccttctgtctc
agctccaacttgtgttcatataatgaacaagctagagaaattattcctct
ctattatgttaagaatgtagaacttctctttctgcaaacaagaagagggt
cttcaccggaattgcctatgcttagctggacttcaacctcaaaatatatc
gacgaaacattcacatcggctactgtga

gaattctgtaggcttcttgtatgctcatgggcatttctttctttaggtta
gagaagttttcttgtataattttattgtagatatttactggccctttaag
ttgaaaatattcattctcatctatacctattatccttaggcttggtcttc
tcattgtgtcatggatttcctggatgttttgaggtaggatctttttgtat
tttgcattttctttgattgttgtgttcatgttttctatggactcacaacc
atttttaattttagctccatggtatttgaatactctagtttcctttgaaa
cttgtactcaaattcactaaaccaatgaaaacaactttacttcctaattt
aactgactaggaaacagaagcagaaagaatatgagtggaagctgttggct
ggatatagagaactaggaactctaaaggtaagtatatgcaatcccaggct
cctgattgcatttcatctatatttctggtgtagcctagcctgaacatgag
aacaagactacatgagaacatatattaagaaattagaacaggccatctct
caatagcgctgatgctacagaggctggaacccaaccttcttgaaaatcct
attgttagtgatgcaaaaccaaaatccactgactcatttactgagcctta
ggacttggtagaaaaggatcacaagcttccatatcagagcaccatcatgc
atgtgcttctacctctccagccttgttctttagactcatacttactccca
atcatatcttagtgttcacttatcttatattgtatcagtttgtaagtgtt
cttgtatggagatagtcttatggatacttagaatataagcatgtgtgtgc
atgtgcacatgttgagataaggtgctattgcagcaactatgctgggctgt
agaaaggggcactatatttttaaaagttccgagctttggcaatttattta
cattctgatctgaatgtctctccctaattccacgaaggatgttatttcag
agggaatcccatacgatttttattcttattactatggtgtctactgcttc
aaccaaggcttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114981161_114982237
seq2: B6Ng01-302F01.g_66_1130

seq1  GAATTCTGTAGGCTTCTTGTATGCTCATGGGCATTTCTTTCTTTAGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGGCTTCTTGTATGCTCATGGGCATTTCTTTCTTTAGGTTA  50

seq1  GAGAAGTTTTCTTGTATAATTTTATTGTAGATATTTACTGGCCCTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTTTCTTGTATAATTTTATTGTAGATATTTACTGGCCCTTTAAG  100

seq1  TTGAAAATATTCATTCTCATCTATACCTATTATCCTTAGGCTTGGTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATTCATTCTCATCTATACCTATTATCCTTAGGCTTGGTCTTC  150

seq1  TCATTGTGTCATGGATTTCCTGGATGTTTTGAGGTAGGATCTTTTTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGTCATGGATTTCCTGGATGTTTTGAGGTAGGATCTTTTTGTAT  200

seq1  TTTGCATTTTCTTTGATTGTTGTGTTCATGTTTTCTATGGACTCACAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTTCTTTGATTGTTGTGTTCATGTTTTCTATGGACTCACAACC  250

seq1  ATTTTTAATTTTAGCTCCATGGTATTTGAATACTCTAGTTTCCTTTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAATTTTAGCTCCATGGTATTTGAATACTCTAGTTTCCTTTGAAA  300

seq1  CTTGTACTCAAATTCACTAAACCAATGAAAACAACTTTACTTCCTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTCAAATTCACTAAACCAATGAAAACAACTTTACTTCCTAATTT  350

seq1  AACTGACTAGGAAACAGAAGCAGAAAGAATATGAGTGGAAGCTGTTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTAGGAAACAGAAGCAGAAAGAATATGAGTGGAAGCTGTTGGCT  400

seq1  GGATATAGAGAACTAGGAACTCTAAAGGTAAGTATATGCAATCCCAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAGAGAACTAGGAACTCTAAAGGTAAGTATATGCAATCCCAGGCT  450

seq1  CCTGATTGCATTTCATCTATATTTCTGGTGTAGCCTAGCCTGAACATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGCATTTCATCTATATTTCTGGTGTAGCCTAGCCTGAACATGAG  500

seq1  AACAAGACTACATGAGAACATATATTAAGAAATTAGAACAGGCCATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGACTACATGAGAACATATATTAAGAAATTAGAACAGGCCATCTCT  550

seq1  CAATAGCGCTGATGCTACAGAGGCTGGAACCCAACCTTCTTGAAAATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCGCTGATGCTACAGAGGCTGGAACCCAACCTTCTTGAAAATCCT  600

seq1  ATTGTTAGTGATGCAAAACCAAAATCCACTGACTCATTTACTGAGCCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAGTGATGCAAAACCAAAATCCACTGACTCATTTACTGAGCCTTA  650

seq1  GGACTTGGTAGAAAAGGATCACAAGCTTCCATATCAGAGCACCATCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGGTAGAAAAGGATCACAAGCTTCCATATCAGAGCACCATCATGC  700

seq1  ATGTGCTTCTACCTCTCCAGCCTTGTTCTTTAGACTCATACTTACTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTTCTACCTCTCCAGCCTTGTTCTTTAGACTCATACTTACTCCCA  750

seq1  ATCATATCTTAGTGTTCACTTATCTTATATTGTATCAGTTTGTAAGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCTTAGTGTTCACTTATCTTATATTGTATCAGTTTGTAAGTGTT  800

seq1  CTTGTATGGAGATAGTCTTATGGATACTTAGAATATAAGCATGTGTGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGGAGATAGTCTTATGGATACTTAGAATATAAGCATGTGTGTGC  850

seq1  ATGTGCACATGTTGAGATAAGGTGCTATTGCAGCAACTATGCTGGGCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATGTTGAGATAAGGTGCTATTGCAGCAACTATGCTGGGCTGT  900

seq1  AGAAAGGGGCACTATATTTTTAAAAGTTTCCCGAGCTTTGCAAATTTTAT  950
      ||||||||||||||||||||||||||||  ||||||||||  || |||||
seq2  AGAAAGGGGCACTATATTTTTAAAAGTT--CCGAGCTTTGGCAA-TTTAT  947

seq1  TTACATTCTGAATCTGAATGTCTCTTCCCTAATTCCCACGAAAGGATGTT  1000
      |||||||||| ||||||||||||| ||||||||| ||||| |||||||||
seq2  TTACATTCTG-ATCTGAATGTCTC-TCCCTAATT-CCACG-AAGGATGTT  993

seq1  TAATTTCAGAGGAAATCCCCATACGATTTTTTAATTCCTATTACTAATGT  1050
        |||||||||| ||| ||||||||||||||  |||| ||||||||  ||
seq2  --ATTTCAGAGGGAAT-CCCATACGATTTTT--ATTCTTATTACTATGGT  1038

seq1  GTCTACTGC-TCAACCCAGGCTTTCTCT  1077
      ||||||||| |||||| |||| ||||||
seq2  GTCTACTGCTTCAACCAAGGC-TTCTCT  1065


| Home | SequenceCutter | Blast | Download |