BAC Information

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BAC

Clone NameB6Ng01-302F22
Chromosome1 (Build37)
Map Location 185,568,891 - 185,731,199
singlet/doubletdoublet
Overlap genenone
Upstream gene4922505E12Rik, Susd4, Tlr5, EG666649
Downstream gene1700056E22Rik, Dusp10, EG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302F22.bB6Ng01-302F22.g
ACCGA096435GA096436
length1,137994
definitionB6Ng01-302F22.b B6Ng01-302F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(185,730,096 - 185,731,199)(185,568,891 - 185,569,946)
sequence
gaattcaggatttcagaattgtggcgcttagagaactgctggaagtcatc
tttggaaggtgaccacatttttgattctgttgcagctgagaaaaatggct
cccctcagagctctttggggctgacggggaacccgggtttcctccctccc
acatcaaaatattgtgtgtatcaatcaaaccatgtatccctggtgtaagt
gtgcatgtgtgagagaggctttagatatgttttctgttctggaaggttct
ctggcagaagatcagaagatctaatctcctaaatcacattctattaccaa
ttgcctgttgactatagtcatcatctacccatctgtaagataagtagttc
atacacacgttgtcctggatcaataagctgtccagaacatacaggaggat
ttatggttaaaatggttgaaatggttgaaaaaggaaacgaggaggctggg
cgtggtggtgcacacctttaatcccagcacgtgggaggcagaggcaggca
gatttctgagttcgaggccagcctggtctacagagtgagttccaggacag
ccagggatatacagagaaaccatgtccccccaaaaaacaaaacaaaaaag
gaaacaaggaaagggactttccttatttttgactttacaaagtcaaagcc
atgtttaccaaaacacatcctaatgtatcgtccctctaacacccagggct
tcctgcttcccactccccaacctctgagccaggacagtcttggcctttac
aggtaacactagagatgagaatgaccttatgatggaaatggcaacctcta
ggctgctacctgacagaacactgggacaagtgatctcctatgacctccta
ctgatgcctgtctcttagcataaaaattctgggttctaacctgatccctt
taaccatacaaaggctatggggaaataaatgggtgtgaagggaggacaca
acacaggagagagggagtacacacagacctatttccatggttggtgggct
aatggaaaggaaaacatgcctgaacttcctcctttagcaccttccggtta
ctccttcatgctcaaagcctcttatttaaaataatggtcaattaaaaatt
ttcttaaccttggggaaaggggaagaaagcatggaga
gaattcaaatgtgagagagggaggggaaaggcccaagatctttccagaag
gacatgaaattatgtagctggtgagctagattcctcagcgcccttgtgtg
gttcattaggcagctcagccagtagactcacatgggggttcattaagagc
agatctttacatatagacaatgtgcaggaagtggaagacttggaagtact
gggctccaaatggaatgtcttcatcaggacctcaaggcccagggatctat
gtggaagaagaatcggaaagattataggagccagaggaggtggatgacgc
caaggaaacatgtcttccagatacgcatgtgaactcacagagcctggggc
agcatgcacaggacctgctcaggcaggttcaaagcagaccaaatcccagc
acagagaaggggaggtgaccacaatgtcccacccttaaccaagaagcttt
ttgtgattgacacctactgggaaaatcagttttctctaatgcctgtatca
agcacactctagggcaggctctgtacccaggagttttttttttggctaac
aaaaaacagactccatggtttttcatgtgcttgtggtttgatgtgtggtt
tgcttgcttgtttgagggagagcacaggtgaatgaaattgactgagtcgg
gagataaagagggccggggaggaattgaaaggagaaagaacatggtaaaa
ttatactgtatcaaaaaattttaatgaaaaaagaaaaaaccctgaggtct
tgtcttagttatctgtggcctctgtgatgcttaacctttattgtcaactc
attgagctcatcaacatggagggcatgaaggagatgcacccttgggtgta
cgtataagggtgtttccagaattcaccgagaaaggaagaatgtggaatgt
gggcagccctgtcctctgggcttcggtctggactgaatttgaagcagaag
aaaagaagccagggaagccctgtgttcctccttcctcccttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_185730096_185731199
seq2: B6Ng01-302F22.b_47_1183 (reverse)

seq1  TCTCCATTCTTTCT--CCCTTT-CCCAAG--TTAGAAA---TTTTATTGA  42
      ||||||| ||||||  |||||| ||||||  | |||||   ||| |||||
seq2  TCTCCATGCTTTCTTCCCCTTTCCCCAAGGTTAAGAAAATTTTTAATTGA  50

seq1  -CATTATTTTAA--TAGAGGC-TTGAGCATG-AGGAGTAAC--GGAGGTG  85
       |||||||||||   |||||| ||||||||| |||||||||  | |||||
seq2  CCATTATTTTAAATAAGAGGCTTTGAGCATGAAGGAGTAACCGGAAGGTG  100

seq1  CTAA--GAGGAAAGTCAGGCATGTTTTC--TTTCATTAG-CCACCA--CA  128
      ||||  ||||||  ||||||||||||||  || |||||| ||||||  ||
seq2  CTAAAGGAGGAAGTTCAGGCATGTTTTCCTTTCCATTAGCCCACCAACCA  150

seq1  TGG-AATA-GTCTGTGTGTACT-CCTCTCT-CTGTG-TGTGTCCT-CCTT  172
      ||| |||| ||||||||||||| ||||||| ||||| |||||||| ||||
seq2  TGGAAATAGGTCTGTGTGTACTCCCTCTCTCCTGTGTTGTGTCCTCCCTT  200

seq1  CACACC--ATTATTT-CCCATAGCCTTTGTATGGTT-AAGGGATCAGGTT  218
      ||||||   |||||| |||||||||||||||||||| |||||||||||||
seq2  CACACCCATTTATTTCCCCATAGCCTTTGTATGGTTAAAGGGATCAGGTT  250

seq1  AGAA-CCAGAATTTTTATGCTAAGAGACAGGCATCAGTAGGAGGTCATAG  267
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGAATTTTTATGCTAAGAGACAGGCATCAGTAGGAGGTCATAG  300

seq1  GAGATCACTTGTCCCAGTGTTCTGTCAGGTAGCAGCCTAGAGGTTGCCAT  317
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCACTTGTCCCAGTGTTCTGTCAGGTAGCAGCCTAGAGGTTGCCAT  350

seq1  TTCCATCATAAGGTCATTCTCATCTCTAGTGTTACCTGTAAAGGCCAAGA  367
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCATAAGGTCATTCTCATCTCTAGTGTTACCTGTAAAGGCCAAGA  400

seq1  CTGTCCTGGCTCAGAGGTTGGGGAGTGGGAAGCAGGAAGCCCTGGGTGTT  417
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGCTCAGAGGTTGGGGAGTGGGAAGCAGGAAGCCCTGGGTGTT  450

seq1  AGAGGGACGATACATTAGGATGTGTTTTGGTAAACATGGCTTTGACTTTG  467
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACGATACATTAGGATGTGTTTTGGTAAACATGGCTTTGACTTTG  500

seq1  TAAAGTCAAAAATAAGGAAAGTCCCTTTCCTTGTTTCCTTTTTTGTTTTG  517
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCAAAAATAAGGAAAGTCCCTTTCCTTGTTTCCTTTTTTGTTTTG  550

seq1  TTTTTTGGGGGGACATGGTTTCTCTGTATATCCCTGGCTGTCCTGGAACT  567
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGGGGGACATGGTTTCTCTGTATATCCCTGGCTGTCCTGGAACT  600

seq1  CACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGC  617
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGC  650

seq1  CTCCCACGTGCTGGGATTAAAGGTGTGCACCACCACGCCCAGCCTCCTCG  667
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACGTGCTGGGATTAAAGGTGTGCACCACCACGCCCAGCCTCCTCG  700

seq1  TTTCCTTTTTCAACCATTTCAACCATTTTAACCATAAATCCTCCTGTATG  717
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTCAACCATTTCAACCATTTTAACCATAAATCCTCCTGTATG  750

seq1  TTCTGGACAGCTTATTGATCCAGGACAACGTGTGTATGAACTACTTATCT  767
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACAGCTTATTGATCCAGGACAACGTGTGTATGAACTACTTATCT  800

seq1  TACAGATGGGTAGATGATGACTATAGTCAACAGGCAATTGGTAATAGAAT  817
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGGGTAGATGATGACTATAGTCAACAGGCAATTGGTAATAGAAT  850

seq1  GTGATTTAGGAGATTAGATCTTCTGATCTTCTGCCAGAGAACCTTCCAGA  867
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTAGGAGATTAGATCTTCTGATCTTCTGCCAGAGAACCTTCCAGA  900

seq1  ACAGAAAACATATCTAAAGCCTCTCTCACACATGCACACTTACACCAGGG  917
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAACATATCTAAAGCCTCTCTCACACATGCACACTTACACCAGGG  950

seq1  ATACATGGTTTGATTGATACACACAATATTTTGATGTGGGAGGGAGGAAA  967
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGGTTTGATTGATACACACAATATTTTGATGTGGGAGGGAGGAAA  1000

seq1  CCCGGGTTCCCCGTCAGCCCCAAAGAGCTCTGAGGGGAGCCATTTTTCTC  1017
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGTTCCCCGTCAGCCCCAAAGAGCTCTGAGGGGAGCCATTTTTCTC  1050

seq1  AGCTGCAACAGAATCAAAAATGTGGTCACCTTCCAAAGATGACTTCCAGC  1067
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAACAGAATCAAAAATGTGGTCACCTTCCAAAGATGACTTCCAGC  1100

seq1  AGTTCTCTAAGCGCCACAATTCTGAAATCCTGAATTC  1104
      |||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCTAAGCGCCACAATTCTGAAATCCTGAATTC  1137

seq1: chr1_185568891_185569946
seq2: B6Ng01-302F22.g_69_1062

seq1  GAATTCAAATGTGAGAGAGGGAGGGGAAAGGCCCAAGATCTTTCCAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTGAGAGAGGGAGGGGAAAGGCCCAAGATCTTTCCAGAAG  50

seq1  GACATGAAATTATGTAGCTGGTGAGCTAGATTCCTCAGCGCCCTTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAAATTATGTAGCTGGTGAGCTAGATTCCTCAGCGCCCTTGTGTG  100

seq1  GTTCATTAGGCAGCTCAGCCAGTAGACTCACATGGGGGTTCATTAAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTAGGCAGCTCAGCCAGTAGACTCACATGGGGGTTCATTAAGAGC  150

seq1  AGATCTTTACATATAGACAATGTGCAGGAAGTGGAAGACTTGGAAGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTTACATATAGACAATGTGCAGGAAGTGGAAGACTTGGAAGTACT  200

seq1  GGGCTCCAAATGGAATGTCTTCATCAGGACCTCAAGGCCCAGGGATCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCAAATGGAATGTCTTCATCAGGACCTCAAGGCCCAGGGATCTAT  250

seq1  GTGGAAGAAGAATCGGAAAGATTATAGGAGCCAGAGGAGGTGGATGACGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGAAGAATCGGAAAGATTATAGGAGCCAGAGGAGGTGGATGACGC  300

seq1  CAAGGAAACATGTCTTCCAGATACGCATGTGAACTCACAGAGCCTGGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAACATGTCTTCCAGATACGCATGTGAACTCACAGAGCCTGGGGC  350

seq1  AGCATGCACAGGACCTGCTCAGGCAGGTTCAAAGCAGACCAAATCCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCACAGGACCTGCTCAGGCAGGTTCAAAGCAGACCAAATCCCAGC  400

seq1  ACAGAGAAGGGGAGGTGACCACAATGTCCCACCCTTAACCAAGAAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGGGGAGGTGACCACAATGTCCCACCCTTAACCAAGAAGCTTT  450

seq1  TTGTGATTGACACCTACTGGGAAAATCAGTTTTCTCTAATGCCTGTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTGACACCTACTGGGAAAATCAGTTTTCTCTAATGCCTGTATCA  500

seq1  AGCACACTCTAGGGCAGGCTCTGTACCCAGGAGTTTTTTTTTTTGGCTAA  550
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGCACACTCTAGGGCAGGCTCTGTACCCAGGAG-TTTTTTTTTTGGCTAA  549

seq1  CAAAAAACAGACTCCATGGTTTTTCATGTGCTTGTGGTTTGATGTGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAGACTCCATGGTTTTTCATGTGCTTGTGGTTTGATGTGTGGT  599

seq1  TTGCTTGCTTGTTTGAGGGAGAGCACAGGTGAATGAAATTGACTGAGTCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCTTGTTTGAGGGAGAGCACAGGTGAATGAAATTGACTGAGTCG  649

seq1  GGAGATAAAGAGGGCCGGGGAGGAATTGAAAGGAGAAAGAACATGGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAAAGAGGGCCGGGGAGGAATTGAAAGGAGAAAGAACATGGTAAA  699

seq1  ATTATACTGTATCAAAAAATTTTAATGAAAAAAGAAAAAACCCTGAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTGTATCAAAAAATTTTAATGAAAAAAGAAAAAACCCTGAGGTC  749

seq1  TTGTCTTAGTTATCTGTGGCCTCTGTGATGCTTAACCTTTATTGTCAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAGTTATCTGTGGCCTCTGTGATGCTTAACCTTTATTGTCAACT  799

seq1  CATTGAGCTCATCAACATGGAGGGCATGAAGGAGATGCACCCTTGGGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGCTCATCAACATGGAGGGCATGAAGGAGATGCACCCTTGGGTGT  849

seq1  ACGTATAAGGGTGTTTCCAGAATTCACCGAGAAAGGAAGAATGTGGAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATAAGGGTGTTTCCAGAATTCACCGAGAAAGGAAGAATGTGGAATG  899

seq1  TGGGCAGCCCTGTCCTCTGGGCTTCGGTCTGGGACTGAATTTGAAGCAGA  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGGGCAGCCCTGTCCTCTGGGCTTCGGTCT-GGACTGAATTTGAAGCAGA  948

seq1  GAAAAAGAAGCCAGGGAAAGCCTGTGTT-CTCCTTCCCTCCCTTCCTTCC  999
        ||||||||||||||||  |||||||| |||||| |||||||||||   
seq2  AGAAAAGAAGCCAGGGAAGCCCTGTGTTCCTCCTT-CCTCCCTTCCT---  994

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTC  1049
                                                        
seq2  --------------------------------------------------  994

seq1  CCTTCCT  1056
             
seq2  -------  994